RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 CCDC40Q4G0X9 1142 aa15.02■□□□□ -0
SNED1-201ENST00000310397 MEX3CQ5U5Q3 659 aaKnown RBP15.02■□□□□ -0
SNED1-201ENST00000310397 FSD2A1L4K1 749 aa15.02■□□□□ -0
SNED1-201ENST00000310397 LMOD1P29536 600 aaPredicted RBP15.02■□□□□ -0
SNED1-201ENST00000310397 ZGPATQ8N5A5 531 aaKnown RBP15.02■□□□□ -0
SNED1-201ENST00000310397 IPO4Q8TEX9 1081 aaKnown RBP15.02■□□□□ -0
SNED1-201ENST00000310397 GRM8O00222 908 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 RUFY3Q7L099 469 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 HDXQ7Z353 690 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 RSPH14Q9UHP6 348 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 TACC1O75410 805 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 KIF5AQ12840 1032 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 AEBP2Q6ZN18 517 aaPredicted RBP15.02□□□□□ -0.01
SNED1-201ENST00000310397 SLF2Q8IX21 1173 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 TMOD3Q9NYL9 352 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 SHANK2Q9UPX8 1470 aa15.02□□□□□ -0.01
SNED1-201ENST00000310397 PSMA7O14818 248 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 NF2P35240 595 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 TUBB2AQ13885 445 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 TUBB2BQ9BVA1 445 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 STMN4Q9H169 189 aaPredicted RBP15.01□□□□□ -0.01
SNED1-201ENST00000310397 RRAGDQ9NQL2 400 aaPredicted RBP15.01□□□□□ -0.01
SNED1-201ENST00000310397 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 IDI1Q13907 227 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 DHX37Q8IY37 1157 aaKnown RBP15.01□□□□□ -0.01
SNED1-201ENST00000310397 PTCD1O75127 700 aaKnown RBP15.01□□□□□ -0.01
SNED1-201ENST00000310397 MATR3P43243 847 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNED1-201ENST00000310397 TICAM2Q86XR7 235 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 STAMBPO95630 424 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 STAT6P42226 847 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 WTAPQ15007 396 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 KIAA0753Q2KHM9 967 aa15.01□□□□□ -0.01
SNED1-201ENST00000310397 A6NNZ2 444 aa15□□□□□ -0.01
SNED1-201ENST00000310397 TUBB8Q3ZCM7 444 aa15□□□□□ -0.01
SNED1-201ENST00000310397 ZSCAN29Q8IWY8 852 aaPredicted RBP15□□□□□ -0.01
SNED1-201ENST00000310397 BLMP54132 1417 aaPredicted RBP15□□□□□ -0.01
SNED1-201ENST00000310397 GABPB1Q06547 395 aaPredicted RBP15□□□□□ -0.01
SNED1-201ENST00000310397 TTC31Q49AM3 519 aaPredicted RBP15□□□□□ -0.01
SNED1-201ENST00000310397 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
SNED1-201ENST00000310397 RAD50Q92878 1312 aa15□□□□□ -0.01
SNED1-201ENST00000310397 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
SNED1-201ENST00000310397 PRPHP41219 470 aa15□□□□□ -0.01
SNED1-201ENST00000310397 VAMP4O75379 141 aa15□□□□□ -0.01
SNED1-201ENST00000310397 LIG1P18858 919 aa15□□□□□ -0.01
SNED1-201ENST00000310397 TEX13AQ9BXU3 409 aaPredicted RBP15□□□□□ -0.01
SNED1-201ENST00000310397 HAND2P61296 217 aa15□□□□□ -0.01
SNED1-201ENST00000310397 TESK2Q96S53 571 aa15□□□□□ -0.01
SNED1-201ENST00000310397 CHMLP26374 656 aa15□□□□□ -0.01
SNED1-201ENST00000310397 CCDC144CPQ8IYA2 1237 aa15□□□□□ -0.01
SNED1-201ENST00000310397 UBA5Q9GZZ9 404 aa15□□□□□ -0.01
SNED1-201ENST00000310397 NBPF11Q86T75 865 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 C6orf163Q5TEZ5 329 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 CNGA4Q8IV77 575 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 OTUD6BQ8N6M0 293 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 PAF1Q8N7H5 531 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 KIF1BO60333 1816 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 PRPF4BQ13523 1007 aaKnown RBP14.99□□□□□ -0.01
SNED1-201ENST00000310397 IMPACTQ9P2X3 320 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 RBM5P52756 815 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNED1-201ENST00000310397 RTN1Q16799 776 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 RBSNQ9H1K0 784 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 LDHAL6AQ6ZMR3 332 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 ARFGAP2Q8N6H7 521 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 CTNNBL1Q8WYA6 563 aaPredicted RBP14.99□□□□□ -0.01
SNED1-201ENST00000310397 IFNKQ9P0W0 207 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 UQCRFS1P1P0C7P4 283 aa14.99□□□□□ -0.01
SNED1-201ENST00000310397 NUTM2AQ8IVF1 878 aaPredicted RBP14.99□□□□□ -0.01
SNED1-201ENST00000310397 C16orf71Q8IYS4 520 aaPredicted RBP14.99□□□□□ -0.01
SNED1-201ENST00000310397 ANKRD13DQ6ZTN6 518 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 DDX46Q7L014 1031 aaKnown RBP14.98□□□□□ -0.01
SNED1-201ENST00000310397 TSGA10Q9BZW7 698 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 ZC3H6P61129 1189 aaKnown RBP14.98□□□□□ -0.01
SNED1-201ENST00000310397 RASAL2Q9UJF2 1139 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
SNED1-201ENST00000310397 IDEP14735 1019 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 CUL5Q93034 780 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 RASSF4Q9H2L5 321 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 EHMT1Q9H9B1 1298 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 VAV2P52735 878 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 VPS18Q9P253 973 aa14.98□□□□□ -0.01
SNED1-201ENST00000310397 TRMT112Q9UI30 125 aaKnown RBP14.97□□□□□ -0.01
SNED1-201ENST00000310397 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
SNED1-201ENST00000310397 UBE4AQ14139 1066 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 AOX1Q06278 1338 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
SNED1-201ENST00000310397 TCERG1LQ5VWI1 586 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 ESR2Q92731 530 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 RRAGBQ5VZM2 374 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 TBC1D5Q92609 795 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 LLPHQ9BRT6 129 aaKnown RBP14.97□□□□□ -0.01
SNED1-201ENST00000310397 KAT14Q9H8E8 782 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 MYO1BO43795 1136 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 DHX32Q7L7V1 743 aaKnown RBP14.97□□□□□ -0.01
SNED1-201ENST00000310397 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNED1-201ENST00000310397 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
SNED1-201ENST00000310397 USHBP1Q8N6Y0 703 aa14.96□□□□□ -0.01
SNED1-201ENST00000310397 BICDL2A1A5D9 508 aa14.96□□□□□ -0.01
SNED1-201ENST00000310397 AFMP43652 599 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms