RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 ANKRD1Q15327 319 aa27.37■■□□□ 1.97
CTSF-201ENST00000310325 TRMT112Q9UI30 125 aaKnown RBP27.37■■□□□ 1.97
CTSF-201ENST00000310325 NUTM2BA6NNL0 878 aaPredicted RBP27.36■■□□□ 1.97
CTSF-201ENST00000310325 NUTM2EB1AL46 878 aaPredicted RBP27.36■■□□□ 1.97
CTSF-201ENST00000310325 CCDC158Q5M9N0 1113 aa27.36■■□□□ 1.97
CTSF-201ENST00000310325 NUTM2AQ8IVF1 878 aaPredicted RBP27.36■■□□□ 1.97
CTSF-201ENST00000310325 MARCH10Q8NA82 808 aaPredicted RBP27.36■■□□□ 1.97
CTSF-201ENST00000310325 TBC1D2BQ9UPU7 963 aa27.36■■□□□ 1.97
CTSF-201ENST00000310325 SLIT2O94813 1529 aa27.36■■□□□ 1.97
CTSF-201ENST00000310325 RIC1Q4ADV7 1423 aa27.36■■□□□ 1.97
CTSF-201ENST00000310325 RREB1Q92766 1687 aa27.36■■□□□ 1.97
CTSF-201ENST00000310325 NCLP19338 710 aaKnown RBP27.36■■□□□ 1.97
CTSF-201ENST00000310325 ME3Q16798 604 aa27.36■■□□□ 1.97
CTSF-201ENST00000310325 GAS2L3Q86XJ1 694 aa27.36■■□□□ 1.97
CTSF-201ENST00000310325 IRS4O14654 1257 aaPredicted RBP27.35■■□□□ 1.97
CTSF-201ENST00000310325 ITGA6P23229 1130 aa27.35■■□□□ 1.97
CTSF-201ENST00000310325 COL9A3Q14050 684 aaPredicted RBP27.35■■□□□ 1.97
CTSF-201ENST00000310325 ZMYM1Q5SVZ6 1142 aa27.35■■□□□ 1.97
CTSF-201ENST00000310325 XAGE2Q96GT9 111 aa27.35■■□□□ 1.97
CTSF-201ENST00000310325 GORABQ5T7V8 394 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 CAVIN1Q6NZI2 390 aaKnown RBP27.34■■□□□ 1.97
CTSF-201ENST00000310325 GPT2Q8TD30 523 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 ACSBG1Q96GR2 724 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 GREM2Q9H772 168 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 TPCN1Q9ULQ1 816 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 A0A0G2JS52 829 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 EIF5P55010 431 aaKnown RBP27.34■■□□□ 1.97
CTSF-201ENST00000310325 TTC39AQ5SRH9 613 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 BARGINQ6ZT62 677 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 ZNF34Q8IZ26 560 aa27.34■■□□□ 1.97
CTSF-201ENST00000310325 ANKRD18BA2A2Z9 1011 aa27.33■■□□□ 1.97
CTSF-201ENST00000310325 STX6O43752 255 aa27.33■■□□□ 1.97
CTSF-201ENST00000310325 ZSCAN22P10073 491 aaPredicted RBP27.33■■□□□ 1.97
CTSF-201ENST00000310325 SYT1P21579 422 aa27.33■■□□□ 1.97
CTSF-201ENST00000310325 ADORA1P30542 326 aa27.33■■□□□ 1.97
CTSF-201ENST00000310325 ST3GAL1Q11201 340 aa27.33■■□□□ 1.97
CTSF-201ENST00000310325 CCDC87Q9NVE4 849 aa27.33■■□□□ 1.97
CTSF-201ENST00000310325 UBN2Q6ZU65 1347 aa27.33■■□□□ 1.97
CTSF-201ENST00000310325 PDE8AO60658 829 aa27.33■■□□□ 1.96
CTSF-201ENST00000310325 GJB2P29033 226 aa27.33■■□□□ 1.96
CTSF-201ENST00000310325 RIPOR2Q9Y4F9 1068 aa27.33■■□□□ 1.96
CTSF-201ENST00000310325 RNF113AO15541 343 aaKnown RBP27.32■■□□□ 1.96
CTSF-201ENST00000310325 INTS5Q6P9B9 1019 aaKnown RBP27.32■■□□□ 1.96
CTSF-201ENST00000310325 LDHAL6AQ6ZMR3 332 aa27.32■■□□□ 1.96
CTSF-201ENST00000310325 ATP6V1AP38606 617 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 DSCC1Q9BVC3 393 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 PANK2Q9BZ23 570 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 MBD3O95983 291 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 CYP21A2P08686 494 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 TOB2Q14106 344 aaPredicted RBP27.31■■□□□ 1.96
CTSF-201ENST00000310325 METTL24Q5JXM2 366 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 TCEANC2Q96MN5 208 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 NEK1Q96PY6 1258 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 ABCC12Q96J65 1359 aa27.31■■□□□ 1.96
CTSF-201ENST00000310325 TCHHQ07283 1943 aa27.3■■□□□ 1.96
CTSF-201ENST00000310325 CRKLP46109 303 aaKnown RBP27.3■■□□□ 1.96
CTSF-201ENST00000310325 ZNF445P59923 1031 aa27.3■■□□□ 1.96
CTSF-201ENST00000310325 ATP2B3Q16720 1220 aa27.3■■□□□ 1.96
CTSF-201ENST00000310325 LAMA4Q16363 1823 aa27.3■■□□□ 1.96
CTSF-201ENST00000310325 LOC102724428A0A0B4J2F2 783 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 TOM1O60784 492 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 SIK1P57059 783 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 FKBP4Q02790 459 aaKnown RBP eCLIP27.29■■□□□ 1.96
CTSF-201ENST00000310325 LRRFIP1Q32MZ4 808 aaKnown RBP27.29■■□□□ 1.96
CTSF-201ENST00000310325 ZSCAN23Q3MJ62 389 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 SLFNL1Q499Z3 407 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 NECAB1Q8N987 351 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 LRP5O75197 1615 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 MAST3O60307 1309 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 PIP4K2BP78356 416 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 MYH7P12883 1935 aa27.29■■□□□ 1.96
CTSF-201ENST00000310325 CNNM1Q9NRU3 951 aa27.28■■□□□ 1.96
CTSF-201ENST00000310325 MYH14Q7Z406 1995 aaKnown RBP27.28■■□□□ 1.96
CTSF-201ENST00000310325 F13A1P00488 732 aa27.28■■□□□ 1.96
CTSF-201ENST00000310325 AK7Q96M32 723 aa27.27■■□□□ 1.96
CTSF-201ENST00000310325 FOXD4L6Q3SYB3 417 aaPredicted RBP27.26■■□□□ 1.95
CTSF-201ENST00000310325 FOXD4L3Q6VB84 417 aaPredicted RBP27.26■■□□□ 1.95
CTSF-201ENST00000310325 AKAP11Q9UKA4 1901 aa27.26■■□□□ 1.95
CTSF-201ENST00000310325 ZFYP08048 801 aaPredicted RBP27.26■■□□□ 1.95
CTSF-201ENST00000310325 ITPK1Q13572 414 aa27.26■■□□□ 1.95
CTSF-201ENST00000310325 VGLL2Q8N8G2 317 aa27.26■■□□□ 1.95
CTSF-201ENST00000310325 ATP6V1DQ9Y5K8 247 aa27.26■■□□□ 1.95
CTSF-201ENST00000310325 HSPD1P10809 573 aaKnown RBP27.25■■□□□ 1.95
CTSF-201ENST00000310325 SCARF1Q14162 830 aa27.25■■□□□ 1.95
CTSF-201ENST00000310325 RBM27Q9P2N5 1060 aaKnown RBP27.25■■□□□ 1.95
CTSF-201ENST00000310325 NSFL1CQ9UNZ2 370 aaKnown RBP27.25■■□□□ 1.95
CTSF-201ENST00000310325 COL5A3P25940 1745 aaPredicted RBP27.25■■□□□ 1.95
CTSF-201ENST00000310325 MTMR6Q9Y217 621 aa27.24■■□□□ 1.95
CTSF-201ENST00000310325 TMEM87AQ8NBN3 555 aa27.24■■□□□ 1.95
CTSF-201ENST00000310325 M0R2C6 588 aa27.23■■□□□ 1.95
CTSF-201ENST00000310325 CAMTA2O94983 1202 aa27.23■■□□□ 1.95
CTSF-201ENST00000310325 HMGB1P09429 215 aaKnown RBP27.23■■□□□ 1.95
CTSF-201ENST00000310325 PDIA4P13667 645 aaKnown RBP27.23■■□□□ 1.95
CTSF-201ENST00000310325 ZAP70P43403 619 aa27.23■■□□□ 1.95
CTSF-201ENST00000310325 SUSD4Q5VX71 490 aa27.23■■□□□ 1.95
CTSF-201ENST00000310325 SMARCC1Q92922 1105 aaPredicted RBP27.23■■□□□ 1.95
CTSF-201ENST00000310325 TMEM63CQ9P1W3 806 aa27.23■■□□□ 1.95
CTSF-201ENST00000310325 ARAP2Q8WZ64 1704 aa27.23■■□□□ 1.95
CTSF-201ENST00000310325 STOX1Q6ZVD7 989 aa27.23■■□□□ 1.95
CTSF-201ENST00000310325 USP48Q86UV5 1035 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms