RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 BCL2L12Q9HB09 334 aa28.49■■■□□ 2.15
SNCB-201ENST00000310112 PAG1Q9NWQ8 432 aa28.49■■■□□ 2.15
SNCB-201ENST00000310112 PDE8BO95263 885 aa28.48■■■□□ 2.15
SNCB-201ENST00000310112 IGHMBP2P38935 993 aaKnown RBP28.48■■■□□ 2.15
SNCB-201ENST00000310112 TTC39AQ5SRH9 613 aa28.48■■■□□ 2.15
SNCB-201ENST00000310112 USPL1Q5W0Q7 1092 aa28.48■■■□□ 2.15
SNCB-201ENST00000310112 SETDB2Q96T68 719 aa28.48■■■□□ 2.15
SNCB-201ENST00000310112 CDC5LQ99459 802 aaKnown RBP28.48■■■□□ 2.15
SNCB-201ENST00000310112 DNAJC2Q99543 621 aaKnown RBP28.48■■■□□ 2.15
SNCB-201ENST00000310112 CIZ1Q9ULV3 898 aaPredicted RBP28.48■■■□□ 2.15
SNCB-201ENST00000310112 CCDC171Q6TFL3 1326 aa28.47■■■□□ 2.15
SNCB-201ENST00000310112 MED23Q9ULK4 1368 aa28.47■■■□□ 2.15
SNCB-201ENST00000310112 TRAPPC3LQ5T215 181 aa28.47■■■□□ 2.15
SNCB-201ENST00000310112 KCNB2Q92953 911 aa28.47■■■□□ 2.15
SNCB-201ENST00000310112 MPHOSPH8Q99549 860 aa28.47■■■□□ 2.15
SNCB-201ENST00000310112 CHMP5Q9NZZ3 219 aa28.47■■■□□ 2.15
SNCB-201ENST00000310112 FAM177BA6PVY3 158 aa28.46■■■□□ 2.15
SNCB-201ENST00000310112 PUM3Q15397 648 aaKnown RBP28.46■■■□□ 2.15
SNCB-201ENST00000310112 ARHGEF1Q92888 912 aaKnown RBP28.46■■■□□ 2.15
SNCB-201ENST00000310112 TBC1D9BQ66K14 1250 aa28.45■■■□□ 2.14
SNCB-201ENST00000310112 RFC4P35249 363 aa28.44■■■□□ 2.14
SNCB-201ENST00000310112 LPIN2Q92539 896 aa28.44■■■□□ 2.14
SNCB-201ENST00000310112 MAP4K1Q92918 833 aa28.44■■■□□ 2.14
SNCB-201ENST00000310112 FAM227BQ96M60 508 aa28.44■■■□□ 2.14
SNCB-201ENST00000310112 SLKQ9H2G2 1235 aaPredicted RBP28.44■■■□□ 2.14
SNCB-201ENST00000310112 TPTE2Q6XPS3 522 aa28.43■■■□□ 2.14
SNCB-201ENST00000310112 HELLSQ9NRZ9 838 aa28.43■■■□□ 2.14
SNCB-201ENST00000310112 ARAP2Q8WZ64 1704 aa28.43■■■□□ 2.14
SNCB-201ENST00000310112 C4AP0C0L4 1744 aa28.42■■■□□ 2.14
SNCB-201ENST00000310112 A0A0D9SFI3 127 aa28.42■■■□□ 2.14
SNCB-201ENST00000310112 CD2BP2O95400 341 aaKnown RBP28.42■■■□□ 2.14
SNCB-201ENST00000310112 HSP90AA1P07900 732 aaKnown RBP28.42■■■□□ 2.14
SNCB-201ENST00000310112 UQCRFS1P1P0C7P4 283 aa28.42■■■□□ 2.14
SNCB-201ENST00000310112 GTF2E1P29083 439 aaPredicted RBP28.42■■■□□ 2.14
SNCB-201ENST00000310112 ERFEQ4G0M1 354 aa28.42■■■□□ 2.14
SNCB-201ENST00000310112 PALD1Q9ULE6 856 aa28.42■■■□□ 2.14
SNCB-201ENST00000310112 ZFYP08048 801 aaPredicted RBP28.41■■■□□ 2.14
SNCB-201ENST00000310112 SLC5A1P13866 664 aa28.41■■■□□ 2.14
SNCB-201ENST00000310112 FGFR2P21802 821 aa28.41■■■□□ 2.14
SNCB-201ENST00000310112 NEK4P51957 841 aa28.41■■■□□ 2.14
SNCB-201ENST00000310112 MCMDC2Q4G0Z9 681 aa28.41■■■□□ 2.14
SNCB-201ENST00000310112 RNF20Q5VTR2 975 aa28.41■■■□□ 2.14
SNCB-201ENST00000310112 TM6SF1Q9BZW5 370 aa28.41■■■□□ 2.14
SNCB-201ENST00000310112 GOLIM4O00461 696 aa28.4■■■□□ 2.14
SNCB-201ENST00000310112 SSFA2P28290 1259 aa28.4■■■□□ 2.14
SNCB-201ENST00000310112 ADORA1P30542 326 aa28.4■■■□□ 2.14
SNCB-201ENST00000310112 DDX46Q7L014 1031 aaKnown RBP28.4■■■□□ 2.14
SNCB-201ENST00000310112 NBPF5PQ86XG9 351 aaPredicted RBP28.4■■■□□ 2.14
SNCB-201ENST00000310112 EDC3Q96F86 508 aaKnown RBP28.4■■■□□ 2.14
SNCB-201ENST00000310112 SRP68Q9UHB9 627 aaKnown RBP28.4■■■□□ 2.14
SNCB-201ENST00000310112 SNX14Q9Y5W7 946 aa28.4■■■□□ 2.14
SNCB-201ENST00000310112 ZKSCAN1P17029 563 aaPredicted RBP28.39■■■□□ 2.14
SNCB-201ENST00000310112 DDIT3P35638 169 aa28.39■■■□□ 2.14
SNCB-201ENST00000310112 NECTIN1Q15223 517 aa28.39■■■□□ 2.14
SNCB-201ENST00000310112 LRRC4BQ9NT99 713 aa28.39■■■□□ 2.14
SNCB-201ENST00000310112 HMG20BQ9P0W2 317 aa28.39■■■□□ 2.14
SNCB-201ENST00000310112 PTH1RQ03431 593 aa28.38■■■□□ 2.13
SNCB-201ENST00000310112 TTF1Q15361 905 aaPredicted RBP28.38■■■□□ 2.13
SNCB-201ENST00000310112 ARID4AP29374 1257 aaPredicted RBP28.37■■■□□ 2.13
SNCB-201ENST00000310112 UBR3Q6ZT12 1888 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 ANKRD18AQ8IVF6 992 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 NLRP3Q96P20 1036 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 SEC31BQ9NQW1 1179 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 RBM8AQ9Y5S9 174 aaKnown RBP28.37■■■□□ 2.13
SNCB-201ENST00000310112 CARMIL3Q8ND23 1372 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 RNF113AO15541 343 aaKnown RBP28.37■■■□□ 2.13
SNCB-201ENST00000310112 TRIM37O94972 964 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 KCNJ4P48050 445 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 ZMYM1Q5SVZ6 1142 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 BICDL1Q6ZP65 573 aa28.37■■■□□ 2.13
SNCB-201ENST00000310112 CWC22Q9HCG8 908 aaKnown RBP28.37■■■□□ 2.13
SNCB-201ENST00000310112 TAF5LO75529 589 aa28.36■■■□□ 2.13
SNCB-201ENST00000310112 BSDC1Q9NW68 430 aaPredicted RBP28.36■■■□□ 2.13
SNCB-201ENST00000310112 U3KPZ7 1027 aaPredicted RBP28.36■■■□□ 2.13
SNCB-201ENST00000310112 PLSCR1O15162 318 aa28.35■■■□□ 2.13
SNCB-201ENST00000310112 TSGA10IPQ3SY00 556 aa28.35■■■□□ 2.13
SNCB-201ENST00000310112 ZSCAN25Q6NSZ9 544 aa28.35■■■□□ 2.13
SNCB-201ENST00000310112 PSMA5P28066 241 aa28.34■■■□□ 2.13
SNCB-201ENST00000310112 FKBP4Q02790 459 aaKnown RBP eCLIP28.34■■■□□ 2.13
SNCB-201ENST00000310112 NFKBIBQ15653 356 aa28.34■■■□□ 2.13
SNCB-201ENST00000310112 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.34■■■□□ 2.13
SNCB-201ENST00000310112 CREB3L3Q68CJ9 461 aa28.33■■■□□ 2.13
SNCB-201ENST00000310112 SPRYD3Q8NCJ5 442 aa28.33■■■□□ 2.13
SNCB-201ENST00000310112 NDUFB9Q9Y6M9 179 aa28.33■■■□□ 2.13
SNCB-201ENST00000310112 CASZ1Q86V15 1759 aa28.32■■■□□ 2.12
SNCB-201ENST00000310112 RXRBP28702 533 aa28.32■■■□□ 2.12
SNCB-201ENST00000310112 KRT32Q14532 448 aa28.32■■■□□ 2.12
SNCB-201ENST00000310112 CCDC102BQ68D86 513 aa28.32■■■□□ 2.12
SNCB-201ENST00000310112 PRPF40BQ6NWY9 871 aaKnown RBP28.32■■■□□ 2.12
SNCB-201ENST00000310112 DSCC1Q9BVC3 393 aa28.32■■■□□ 2.12
SNCB-201ENST00000310112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.31■■■□□ 2.12
SNCB-201ENST00000310112 CHRNDQ07001 517 aa28.31■■■□□ 2.12
SNCB-201ENST00000310112 NBR1Q14596 966 aa28.31■■■□□ 2.12
SNCB-201ENST00000310112 ZNF589Q86UQ0 364 aaPredicted RBP28.31■■■□□ 2.12
SNCB-201ENST00000310112 AMIGO3Q86WK7 504 aa28.31■■■□□ 2.12
SNCB-201ENST00000310112 RASEFQ8IZ41 740 aa28.31■■■□□ 2.12
SNCB-201ENST00000310112 AKAP11Q9UKA4 1901 aa28.31■■■□□ 2.12
SNCB-201ENST00000310112 PHF14O94880 888 aa28.3■■■□□ 2.12
SNCB-201ENST00000310112 ZAP70P43403 619 aa28.3■■■□□ 2.12
SNCB-201ENST00000310112 UBE4AQ14139 1066 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms