RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 LIMCH1Q9UPQ0 1083 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 LRRC24Q50LG9 513 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 ZNF34Q8IZ26 560 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 RPGRQ92834 1020 aaKnown RBP18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 ABCA3Q99758 1704 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 SF3B2Q13435 895 aaKnown RBP18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 CPLX2Q6PUV4 134 aaKnown RBP18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 UPF3BQ9BZI7 483 aaKnown RBP18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 SSFA2P28290 1259 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 RFX5P48382 616 aaPredicted RBP18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 GREM2Q9H772 168 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
CGGBP1-201ENST00000309534 KCNQ2O43526 872 aa18.58■□□□□ 0.57
CGGBP1-201ENST00000309534 AMOTL1Q8IY63 956 aa18.58■□□□□ 0.57
CGGBP1-201ENST00000309534 FAM184AQ8NB25 1140 aa18.58■□□□□ 0.56
CGGBP1-201ENST00000309534 AIDAQ96BJ3 306 aa18.58■□□□□ 0.56
CGGBP1-201ENST00000309534 KCPQ6ZWJ8 1503 aa18.58■□□□□ 0.56
CGGBP1-201ENST00000309534 LRP6O75581 1613 aa18.58■□□□□ 0.56
CGGBP1-201ENST00000309534 COL16A1Q07092 1604 aaPredicted RBP18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 SYAP1Q96A49 352 aaPredicted RBP18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 CSF1RP07333 972 aa18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 CASP7P55210 303 aa18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 SYNE3Q6ZMZ3 975 aa18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 NARFQ9UHQ1 456 aa18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 ADRA2BP18089 450 aa18.57■□□□□ 0.56
CGGBP1-201ENST00000309534 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
CGGBP1-201ENST00000309534 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
CGGBP1-201ENST00000309534 TOMM22Q9NS69 142 aa18.56■□□□□ 0.56
CGGBP1-201ENST00000309534 WDR33Q9C0J8 1336 aaKnown RBP18.56■□□□□ 0.56
CGGBP1-201ENST00000309534 TLR7Q9NYK1 1049 aaKnown RBP18.56■□□□□ 0.56
CGGBP1-201ENST00000309534 LAMB4A4D0S4 1761 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 TM6SF1Q9BZW5 370 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 PDE8BO95263 885 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 CREB3L3Q68CJ9 461 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 INTS5Q6P9B9 1019 aaKnown RBP18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 GOLGA6L4A6NEF3 574 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 CAMTA2O94983 1202 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 ITPK1Q13572 414 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 USPL1Q5W0Q7 1092 aa18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 PUS3Q9BZE2 481 aaKnown RBP18.55■□□□□ 0.56
CGGBP1-201ENST00000309534 SIPA1L3O60292 1781 aaPredicted RBP18.54■□□□□ 0.56
CGGBP1-201ENST00000309534 ABCC12Q96J65 1359 aa18.54■□□□□ 0.56
CGGBP1-201ENST00000309534 SLC27A3Q5K4L6 730 aa18.54■□□□□ 0.56
CGGBP1-201ENST00000309534 RAI14Q9P0K7 980 aa18.54■□□□□ 0.56
CGGBP1-201ENST00000309534 INTS4Q96HW7 963 aaKnown RBP18.54■□□□□ 0.56
CGGBP1-201ENST00000309534 TMX3Q96JJ7 454 aa18.54■□□□□ 0.56
CGGBP1-201ENST00000309534 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
CGGBP1-201ENST00000309534 VPS53Q5VIR6 699 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 NEK1Q96PY6 1258 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 ERICH2A1L162 156 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 H3BQV1 296 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 IFFO2Q5TF58 517 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 FAM227BQ96M60 508 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 LSG1Q9H089 658 aaKnown RBP18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 MCM4P33991 863 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 SART3Q15020 963 aaKnown RBP18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 RBM6P78332 1123 aaKnown RBP18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 APPBP2Q92624 585 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 SNX14Q9Y5W7 946 aa18.53■□□□□ 0.56
CGGBP1-201ENST00000309534 ATG9AQ7Z3C6 839 aa18.52■□□□□ 0.56
CGGBP1-201ENST00000309534 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.56
CGGBP1-201ENST00000309534 CPLX1O14810 134 aa18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 SPTY2D1Q68D10 685 aaPredicted RBP18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 HELBQ8NG08 1087 aaPredicted RBP18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 DSCC1Q9BVC3 393 aa18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 ZNF213O14771 459 aa18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 SLC9C2Q5TAH2 1124 aa18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 ABCF2Q9UG63 623 aa18.51■□□□□ 0.55
CGGBP1-201ENST00000309534 GSE1Q14687 1217 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 TFCP2L1Q9NZI6 479 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 DDX49Q9Y6V7 483 aaKnown RBP18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 NWD2Q9ULI1 1742 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 GNAT2P19087 354 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 ZGPATQ8N5A5 531 aaKnown RBP18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 RUFY3Q7L099 469 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 DENND2AQ9ULE3 1009 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
CGGBP1-201ENST00000309534 C5P01031 1676 aa18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 SLC27A2O14975 620 aa18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 DEKP35659 375 aaKnown RBP18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 RPS8P62241 208 aaKnown RBP18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 NAPBQ9H115 298 aa18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 TDO2P48775 406 aa18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 MAP4K1Q92918 833 aa18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 RBM17Q96I25 401 aaKnown RBP18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 A0A0D9SFI3 127 aa18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 UBE4AQ14139 1066 aa18.49■□□□□ 0.55
CGGBP1-201ENST00000309534 NFXL1Q6ZNB6 911 aa18.48■□□□□ 0.55
CGGBP1-201ENST00000309534 GNL2Q13823 731 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms