RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 UNC5CLQ8IV45 518 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 TTC41PQ6P2S7 1318 aa10.77□□□□□ -0.68
XCR1-201ENST00000309285 URI1O94763 535 aaPredicted RBP10.77□□□□□ -0.68
XCR1-201ENST00000309285 KRT18P05783 430 aaKnown RBP10.77□□□□□ -0.68
XCR1-201ENST00000309285 TDO2P48775 406 aa10.77□□□□□ -0.68
XCR1-201ENST00000309285 PIBF1Q8WXW3 757 aa10.77□□□□□ -0.68
XCR1-201ENST00000309285 GNL3LQ9NVN8 582 aaKnown RBP10.77□□□□□ -0.68
XCR1-201ENST00000309285 PDCP20941 246 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 CDK5RAP3Q96JB5 506 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 TCEANC2Q96MN5 208 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 RASSF4Q9H2L5 321 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 U2AF2P26368 475 aaKnown RBP eCLIP10.77□□□□□ -0.69
XCR1-201ENST00000309285 CAMK4Q16566 473 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 DDX46Q7L014 1031 aaKnown RBP10.77□□□□□ -0.69
XCR1-201ENST00000309285 FERMT3Q86UX7 667 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 TXLNBQ8N3L3 684 aa10.77□□□□□ -0.69
XCR1-201ENST00000309285 DIP2AQ14689 1571 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 METTL22Q9BUU2 404 aaPredicted RBP10.76□□□□□ -0.69
XCR1-201ENST00000309285 OSBPL3Q9H4L5 887 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 SLC3A2P08195 630 aaKnown RBP10.76□□□□□ -0.69
XCR1-201ENST00000309285 GCKRQ14397 625 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 STK38Q15208 465 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 ANKRD1Q15327 319 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 ZSCAN31Q96LW9 406 aaPredicted RBP10.76□□□□□ -0.69
XCR1-201ENST00000309285 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 NUP62CLQ9H1M0 184 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 ABCF2Q9UG63 623 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 GOLIM4O00461 696 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 A1BGP04217 495 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 IFIT1P09914 478 aaKnown RBP10.76□□□□□ -0.69
XCR1-201ENST00000309285 CPA1P15085 419 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 OGFRQ9NZT2 677 aa10.76□□□□□ -0.69
XCR1-201ENST00000309285 MYO6Q9UM54 1294 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 RBM8AQ9Y5S9 174 aaKnown RBP10.75□□□□□ -0.69
XCR1-201ENST00000309285 SERPINC1P01008 464 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 TSC1Q92574 1164 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 PALD1Q9ULE6 856 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 SGSM2O43147 1006 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 EXOC5O00471 708 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 IFIT5Q13325 482 aaKnown RBP10.75□□□□□ -0.69
XCR1-201ENST00000309285 RSPH14Q9UHP6 348 aa10.75□□□□□ -0.69
XCR1-201ENST00000309285 NMIQ13287 307 aaPredicted RBP10.74□□□□□ -0.69
XCR1-201ENST00000309285 ITSN1Q15811 1721 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 SHTN1A0MZ66 631 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 KIF2AO00139 706 aaPredicted RBP10.74□□□□□ -0.69
XCR1-201ENST00000309285 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
XCR1-201ENST00000309285 TFCP2Q12800 502 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 KRT32Q14532 448 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 METTL24Q5JXM2 366 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 NEURL1BA8MQ27 555 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 IDH1O75874 414 aaKnown RBP10.74□□□□□ -0.69
XCR1-201ENST00000309285 FEZ1Q99689 392 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 RAI14Q9P0K7 980 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 PCDH11XQ9BZA7 1347 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 PCDH11YQ9BZA8 1340 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 HCLS1P14317 486 aaPredicted RBP10.74□□□□□ -0.69
XCR1-201ENST00000309285 NACAP1Q9BZK3 213 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.74□□□□□ -0.69
XCR1-201ENST00000309285 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 STAP2Q9UGK3 403 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 AOX1Q06278 1338 aa10.74□□□□□ -0.69
XCR1-201ENST00000309285 SSBP05455 408 aaKnown RBP eCLIP10.73□□□□□ -0.69
XCR1-201ENST00000309285 MAP3K11Q16584 847 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 NECAB1Q8N987 351 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 KRT85P78386 507 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 TTC31Q49AM3 519 aaPredicted RBP10.73□□□□□ -0.69
XCR1-201ENST00000309285 CEP135Q66GS9 1140 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 TRMT112Q9UI30 125 aaKnown RBP10.73□□□□□ -0.69
XCR1-201ENST00000309285 DTNBO60941 627 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 AK2P54819 239 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 HS1BP3Q53T59 392 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 LRSAM1Q6UWE0 723 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 ZBTB9Q96C00 473 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 EAF2Q96CJ1 260 aaPredicted RBP10.73□□□□□ -0.69
XCR1-201ENST00000309285 SH2B1Q9NRF2 756 aaPredicted RBP10.73□□□□□ -0.69
XCR1-201ENST00000309285 CEP170BQ9Y4F5 1589 aaPredicted RBP10.73□□□□□ -0.69
XCR1-201ENST00000309285 CTR9Q6PD62 1173 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 FAM227BQ96M60 508 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 LRP2BPQ9P2M1 347 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 NDUFB9Q9Y6M9 179 aa10.73□□□□□ -0.69
XCR1-201ENST00000309285 TXLNAP40222 546 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 PKP1Q13835 747 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 BTG4Q9NY30 223 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 STX6O43752 255 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 TIMM10P62072 90 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.72□□□□□ -0.69
XCR1-201ENST00000309285 NOL7Q9UMY1 257 aaKnown RBP10.72□□□□□ -0.69
XCR1-201ENST00000309285 GJB2P29033 226 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 ME1P48163 572 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 TRIM22Q8IYM9 498 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 DRC1Q96MC2 740 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 TEX13AQ9BXU3 409 aaPredicted RBP10.72□□□□□ -0.69
XCR1-201ENST00000309285 PAXBP1Q9Y5B6 917 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 ATP10DQ9P241 1426 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms