RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
SCUBE2-201ENST00000309263 DDX41Q9UJV9 622 aaKnown RBP16.84■□□□□ 0.29
SCUBE2-201ENST00000309263 GRM8O00222 908 aa16.83■□□□□ 0.29
SCUBE2-201ENST00000309263 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.29
SCUBE2-201ENST00000309263 NBPF4Q96M43 638 aa16.83■□□□□ 0.29
SCUBE2-201ENST00000309263 KAT6BQ8WYB5 2073 aa16.83■□□□□ 0.29
SCUBE2-201ENST00000309263 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
SCUBE2-201ENST00000309263 SNW1Q13573 536 aaKnown RBP16.83■□□□□ 0.28
SCUBE2-201ENST00000309263 CCAR2Q8N163 923 aaKnown RBP16.83■□□□□ 0.28
SCUBE2-201ENST00000309263 GNL2Q13823 731 aaKnown RBP16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 ZNF397Q8NF99 534 aaPredicted RBP16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 GOLPH3LQ9H4A5 285 aa16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 SCRN1Q12765 414 aa16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 ANO10Q9NW15 660 aa16.82■□□□□ 0.28
SCUBE2-201ENST00000309263 OVOS2A0A0J9YW53 1432 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 OVOS2Q6IE36 1432 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 LMOD1P29536 600 aaPredicted RBP16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 IFNKQ9P0W0 207 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 KSR2Q6VAB6 950 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 MYD88Q99836 296 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 PTPDC1A2A3K4 754 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 NRDCO43847 1150 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 SLU7O95391 586 aaKnown RBP16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 STK38Q15208 465 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
SCUBE2-201ENST00000309263 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 TAF5LO75529 589 aa16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 SFPQP23246 707 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 RESTQ13127 1097 aa16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 CYP21A2P08686 494 aa16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 HAND2P61296 217 aa16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 DNAI1Q9UI46 699 aa16.8■□□□□ 0.28
SCUBE2-201ENST00000309263 ADCY9O60503 1353 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 TMEM94Q12767 1356 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 ATF3P18847 181 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 IQCB1Q15051 598 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 NAT10Q9H0A0 1025 aaKnown RBP16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 GOLGA8FQ08AF8 430 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 GOLGA8DPQ0D2H9 430 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 MNS1Q8NEH6 495 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 TFCP2Q12800 502 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 LRRN4CLQ8ND94 238 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 C19orf44Q9H6X5 657 aa16.79■□□□□ 0.28
SCUBE2-201ENST00000309263 GOLIM4O00461 696 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 URI1O94763 535 aaPredicted RBP16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 GJB4Q9NTQ9 266 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 KRT32Q14532 448 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 DBNDD2Q9BQY9 259 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 ZSCAN16Q9H4T2 348 aaPredicted RBP16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 SRCAPQ6ZRS2 3230 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 SLFN14P0C7P3 912 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 TERF2Q15554 542 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 ZFP91Q96JP5 570 aaPredicted RBP16.78■□□□□ 0.28
SCUBE2-201ENST00000309263 A0A0G2JLW4 131 aa16.77■□□□□ 0.28
SCUBE2-201ENST00000309263 ZC3H6P61129 1189 aaKnown RBP16.77■□□□□ 0.28
SCUBE2-201ENST00000309263 DPCR1Q3MIW9 517 aa16.77■□□□□ 0.28
SCUBE2-201ENST00000309263 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.28
SCUBE2-201ENST00000309263 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.27
SCUBE2-201ENST00000309263 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.27
SCUBE2-201ENST00000309263 KDRP35968 1356 aa16.77■□□□□ 0.27
SCUBE2-201ENST00000309263 GABPB1Q06547 395 aaPredicted RBP16.77■□□□□ 0.27
SCUBE2-201ENST00000309263 PDILTQ8N807 584 aa16.77■□□□□ 0.27
SCUBE2-201ENST00000309263 ERO1AQ96HE7 468 aa16.77■□□□□ 0.27
SCUBE2-201ENST00000309263 CCDC66A2RUB6 948 aa16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 MARCKSP29966 332 aaPredicted RBP16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 EPHA10Q5JZY3 1008 aa16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 NOL10Q9BSC4 688 aaKnown RBP16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 UBXN4Q92575 508 aa16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 MRFAP1L1Q96HT8 127 aa16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 EPC1Q9H2F5 836 aa16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 GPHNQ9NQX3 736 aaPredicted RBP16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
SCUBE2-201ENST00000309263 SERPINC1P01008 464 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 CCZ1BP86790 482 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 CCZ1P86791 482 aaPredicted RBP16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 FAM160A1Q05DH4 1040 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 STRCQ7RTU9 1775 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 NEMFO60524 1076 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 PSME1Q06323 249 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 PLEKHO1Q53GL0 409 aaPredicted RBP16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 CPLX1O14810 134 aa16.75■□□□□ 0.27
SCUBE2-201ENST00000309263 TPM4P67936 248 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms