RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 CCER2I3L3R5 266 aa21.66■■□□□ 1.06
HMGCLL1-202ENST00000308161 ECE2O60344 883 aa21.66■■□□□ 1.06
HMGCLL1-202ENST00000308161 CNTROBQ8N137 903 aa21.66■■□□□ 1.06
HMGCLL1-202ENST00000308161 MYH3P11055 1940 aa21.66■■□□□ 1.06
HMGCLL1-202ENST00000308161 FAM161AQ3B820 660 aa21.65■■□□□ 1.06
HMGCLL1-202ENST00000308161 PODXL2Q9NZ53 605 aa21.65■■□□□ 1.06
HMGCLL1-202ENST00000308161 ADAMTSL1Q8N6G6 1762 aa21.64■■□□□ 1.06
HMGCLL1-202ENST00000308161 CASP7P55210 303 aa21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 BEND3Q5T5X7 828 aa21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 ADARB2Q9NS39 739 aaKnown RBP21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 ZBTB12Q9Y330 459 aaPredicted RBP21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 CHMP3Q9Y3E7 222 aa21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 SPEF2Q9C093 1822 aa21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 XDHP47989 1333 aa21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 PASKQ96RG2 1323 aa21.64■■□□□ 1.05
HMGCLL1-202ENST00000308161 PSMD14O00487 310 aa21.63■■□□□ 1.05
HMGCLL1-202ENST00000308161 ITGBL1O95965 494 aaPredicted RBP21.63■■□□□ 1.05
HMGCLL1-202ENST00000308161 ITGA6P23229 1130 aa21.63■■□□□ 1.05
HMGCLL1-202ENST00000308161 IGHMBP2P38935 993 aaKnown RBP21.63■■□□□ 1.05
HMGCLL1-202ENST00000308161 CDCA7LQ96GN5 454 aa21.63■■□□□ 1.05
HMGCLL1-202ENST00000308161 CREBZFQ9NS37 354 aa21.63■■□□□ 1.05
HMGCLL1-202ENST00000308161 SLFN5Q08AF3 891 aa21.62■■□□□ 1.05
HMGCLL1-202ENST00000308161 PLA2G12BQ9BX93 195 aa21.62■■□□□ 1.05
HMGCLL1-202ENST00000308161 KCNQ5Q9NR82 932 aa21.62■■□□□ 1.05
HMGCLL1-202ENST00000308161 MKRN1Q9UHC7 482 aaKnown RBP21.62■■□□□ 1.05
HMGCLL1-202ENST00000308161 RTL9Q8NET4 1388 aa21.62■■□□□ 1.05
HMGCLL1-202ENST00000308161 SHTN1A0MZ66 631 aa21.61■■□□□ 1.05
HMGCLL1-202ENST00000308161 BSDC1Q9NW68 430 aaPredicted RBP21.61■■□□□ 1.05
HMGCLL1-202ENST00000308161 C9orf78Q9NZ63 289 aaPredicted RBP21.61■■□□□ 1.05
HMGCLL1-202ENST00000308161 CNOT7Q9UIV1 285 aaKnown RBP21.61■■□□□ 1.05
HMGCLL1-202ENST00000308161 MINPP1Q9UNW1 487 aa21.61■■□□□ 1.05
HMGCLL1-202ENST00000308161 ATP2B4P23634 1241 aa21.6■■□□□ 1.05
HMGCLL1-202ENST00000308161 MICALL2Q8IY33 904 aa21.6■■□□□ 1.05
HMGCLL1-202ENST00000308161 MPHOSPH8Q99549 860 aa21.6■■□□□ 1.05
HMGCLL1-202ENST00000308161 WTIPA6NIX2 430 aaPredicted RBP21.59■■□□□ 1.05
HMGCLL1-202ENST00000308161 TMEM88BA6NKF7 163 aa21.59■■□□□ 1.05
HMGCLL1-202ENST00000308161 H7C1D1 291 aa21.59■■□□□ 1.05
HMGCLL1-202ENST00000308161 GRM8O00222 908 aa21.59■■□□□ 1.05
HMGCLL1-202ENST00000308161 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
HMGCLL1-202ENST00000308161 SRCIN1Q9C0H9 1055 aa21.59■■□□□ 1.05
HMGCLL1-202ENST00000308161 CSF1RP07333 972 aa21.58■■□□□ 1.05
HMGCLL1-202ENST00000308161 FMR1Q06787 632 aaKnown RBP eCLIP21.58■■□□□ 1.05
HMGCLL1-202ENST00000308161 TRPM4Q8TD43 1214 aa21.58■■□□□ 1.05
HMGCLL1-202ENST00000308161 SSH1Q8WYL5 1049 aa21.58■■□□□ 1.05
HMGCLL1-202ENST00000308161 PCNTO95613 3336 aa21.58■■□□□ 1.04
HMGCLL1-202ENST00000308161 ANKRD18BA2A2Z9 1011 aa21.57■■□□□ 1.04
HMGCLL1-202ENST00000308161 CCT4P50991 539 aaKnown RBP21.57■■□□□ 1.04
HMGCLL1-202ENST00000308161 JMYQ8N9B5 988 aa21.57■■□□□ 1.04
HMGCLL1-202ENST00000308161 TRAF5O00463 557 aa21.56■■□□□ 1.04
HMGCLL1-202ENST00000308161 ALDH1L1O75891 902 aa21.56■■□□□ 1.04
HMGCLL1-202ENST00000308161 FOXO4P98177 505 aa21.56■■□□□ 1.04
HMGCLL1-202ENST00000308161 RBM26Q5T8P6 1007 aaKnown RBP21.56■■□□□ 1.04
HMGCLL1-202ENST00000308161 LMBR1LQ6UX01 489 aa21.56■■□□□ 1.04
HMGCLL1-202ENST00000308161 HIRAP54198 1017 aaPredicted RBP21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 IFIT5Q13325 482 aaKnown RBP21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 TBC1D10BQ4KMP7 808 aaPredicted RBP21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 EPHA10Q5JZY3 1008 aa21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 SAMD7Q7Z3H4 446 aa21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 SMC4Q9NTJ3 1288 aa21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 ABT1Q9ULW3 272 aaKnown RBP21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 KCNJ4P48050 445 aa21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 TAF7LQ5H9L4 462 aa21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 DPF2Q92785 391 aa21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 FBXW7Q969H0 707 aa21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 GLIS2Q9BZE0 524 aaPredicted RBP21.55■■□□□ 1.04
HMGCLL1-202ENST00000308161 SCN9AQ15858 1988 aa21.54■■□□□ 1.04
HMGCLL1-202ENST00000308161 MED23Q9ULK4 1368 aa21.54■■□□□ 1.04
HMGCLL1-202ENST00000308161 RPS12P25398 132 aaKnown RBP21.54■■□□□ 1.04
HMGCLL1-202ENST00000308161 CHRNDQ07001 517 aa21.54■■□□□ 1.04
HMGCLL1-202ENST00000308161 DIEXFQ68CQ4 756 aaKnown RBP21.54■■□□□ 1.04
HMGCLL1-202ENST00000308161 ANKRD2Q9GZV1 360 aa21.54■■□□□ 1.04
HMGCLL1-202ENST00000308161 ZNF804BA4D1E1 1349 aa21.53■■□□□ 1.04
HMGCLL1-202ENST00000308161 PTPRCP08575 1304 aa21.53■■□□□ 1.04
HMGCLL1-202ENST00000308161 VIL1P09327 827 aaKnown RBP21.53■■□□□ 1.04
HMGCLL1-202ENST00000308161 CCDC57Q2TAC2 916 aa21.53■■□□□ 1.04
HMGCLL1-202ENST00000308161 HELBQ8NG08 1087 aaPredicted RBP21.53■■□□□ 1.04
HMGCLL1-202ENST00000308161 ZNF594Q96JF6 807 aaPredicted RBP21.53■■□□□ 1.04
HMGCLL1-202ENST00000308161 LEMD3Q9Y2U8 911 aa21.53■■□□□ 1.04
HMGCLL1-202ENST00000308161 CNTNAP1P78357 1384 aa21.52■■□□□ 1.04
HMGCLL1-202ENST00000308161 EGFRP00533 1210 aa21.52■■□□□ 1.03
HMGCLL1-202ENST00000308161 NBPF7P0C2Y1 421 aaPredicted RBP21.52■■□□□ 1.03
HMGCLL1-202ENST00000308161 PODNQ7Z5L7 613 aa21.52■■□□□ 1.03
HMGCLL1-202ENST00000308161 MIER1Q8N108 512 aa21.52■■□□□ 1.03
HMGCLL1-202ENST00000308161 SUCLG2Q96I99 432 aa21.52■■□□□ 1.03
HMGCLL1-202ENST00000308161 ZNF408Q9H9D4 720 aa21.52■■□□□ 1.03
HMGCLL1-202ENST00000308161 USP17L3A6NCW0 530 aa21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 USP17L4A6NCW7 530 aa21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 TAF5LO75529 589 aa21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 KLRK1P26718 216 aa21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 RSBN1LQ6PCB5 846 aaPredicted RBP21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 PAXIP1Q6ZW49 1069 aaPredicted RBP21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 USP17L1Q7RTZ2 530 aa21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 TXNRD3Q86VQ6 643 aa21.51■■□□□ 1.03
HMGCLL1-202ENST00000308161 SNAP23O00161 211 aa21.5■■□□□ 1.03
HMGCLL1-202ENST00000308161 PLIN1O60240 522 aa21.5■■□□□ 1.03
HMGCLL1-202ENST00000308161 ALDH1L2Q3SY69 923 aa21.5■■□□□ 1.03
HMGCLL1-202ENST00000308161 TRMT2AQ8IZ69 625 aaKnown RBP21.5■■□□□ 1.03
HMGCLL1-202ENST00000308161 ZC3H15Q8WU90 426 aaKnown RBP21.5■■□□□ 1.03
HMGCLL1-202ENST00000308161 CNNM1Q9NRU3 951 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms