RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ZNF827Q17R98 1081 aa8.56□□□□□ -1.04
PTCD2-201ENST00000308077 LRRC24Q50LG9 513 aa8.56□□□□□ -1.04
PTCD2-201ENST00000308077 CLASRPQ8N2M8 674 aaKnown RBP8.56□□□□□ -1.04
PTCD2-201ENST00000308077 EAF2Q96CJ1 260 aaPredicted RBP8.56□□□□□ -1.04
PTCD2-201ENST00000308077 FAM122AQ96E09 287 aa8.56□□□□□ -1.04
PTCD2-201ENST00000308077 PUS3Q9BZE2 481 aaKnown RBP8.56□□□□□ -1.04
PTCD2-201ENST00000308077 AOX1Q06278 1338 aa8.56□□□□□ -1.04
PTCD2-201ENST00000308077 SDSP20132 328 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 ITGA6P23229 1130 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 SSFA2P28290 1259 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 CCDC57Q2TAC2 916 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 ERFEQ4G0M1 354 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 AACSQ86V21 672 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 AKT1S1Q96B36 256 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
PTCD2-201ENST00000308077 ABCC12Q96J65 1359 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 AK9Q5TCS8 1911 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 EYA2O00167 538 aa8.55□□□□□ -1.04
PTCD2-201ENST00000308077 IFIT5Q13325 482 aaKnown RBP8.55□□□□□ -1.04
PTCD2-201ENST00000308077 CCDC8Q9H0W5 538 aaPredicted RBP8.55□□□□□ -1.04
PTCD2-201ENST00000308077 TNRC6CQ9HCJ0 1690 aaKnown RBP8.55□□□□□ -1.04
PTCD2-201ENST00000308077 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 TAF1P21675 1872 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 MSH5O43196 834 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 CIAO1O76071 339 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 IL15P40933 162 aaPredicted RBP8.54□□□□□ -1.04
PTCD2-201ENST00000308077 TNNI3KQ59H18 835 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 FPGT-TNNI3KV9GXZ4 949 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 ZNF609O15014 1411 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 ANKRD18BA2A2Z9 1011 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
PTCD2-201ENST00000308077 GYS1P13807 737 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTCD2-201ENST00000308077 NFIXQ14938 502 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 TBC1D9Q6ZT07 1266 aa8.54□□□□□ -1.04
PTCD2-201ENST00000308077 TTC41PQ6P2S7 1318 aa8.53□□□□□ -1.04
PTCD2-201ENST00000308077 PPEF1O14829 653 aaPredicted RBP8.53□□□□□ -1.04
PTCD2-201ENST00000308077 LBX1P52954 281 aa8.53□□□□□ -1.04
PTCD2-201ENST00000308077 SEC31BQ9NQW1 1179 aa8.53□□□□□ -1.04
PTCD2-201ENST00000308077 FBXO3Q9UK99 471 aa8.53□□□□□ -1.04
PTCD2-201ENST00000308077 RTL9Q8NET4 1388 aa8.53□□□□□ -1.04
PTCD2-201ENST00000308077 A0A1B0GUL6 1792 aa8.53□□□□□ -1.04
PTCD2-201ENST00000308077 CDC45O75419 566 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 MAP4K4O95819 1239 aaPredicted RBP8.52□□□□□ -1.04
PTCD2-201ENST00000308077 TAF7LQ5H9L4 462 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 SLC10A5Q5PT55 438 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 NBPF5PQ86XG9 351 aaPredicted RBP8.52□□□□□ -1.04
PTCD2-201ENST00000308077 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 NYXQ9GZU5 481 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 ECHDC1Q9NTX5 307 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 DBNLQ9UJU6 430 aaKnown RBP8.52□□□□□ -1.04
PTCD2-201ENST00000308077 RIPOR2Q9Y4F9 1068 aa8.52□□□□□ -1.04
PTCD2-201ENST00000308077 CARMIL3Q8ND23 1372 aa8.52□□□□□ -1.05
PTCD2-201ENST00000308077 CCDC152Q4G0S7 254 aa8.52□□□□□ -1.05
PTCD2-201ENST00000308077 DBNDD2Q9BQY9 259 aa8.52□□□□□ -1.05
PTCD2-201ENST00000308077 GPR108Q9NPR9 543 aa8.52□□□□□ -1.05
PTCD2-201ENST00000308077 PKD1L2Q7Z442 2459 aa8.52□□□□□ -1.05
PTCD2-201ENST00000308077 GLRX3O76003 335 aaKnown RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 HSP90B1P14625 803 aaKnown RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 TM4SF1P30408 202 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 MFAP1P55081 439 aaKnown RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 SF3B3Q15393 1217 aaKnown RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 LDHAL6AQ6ZMR3 332 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 COL23A1Q86Y22 540 aaPredicted RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 VGLL2Q8N8G2 317 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 ANO8Q9HCE9 1232 aaPredicted RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 QSER1Q2KHR3 1735 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 ARAP2Q8WZ64 1704 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 PNPLA7Q6ZV29 1317 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 TRIM6-TRIM34B2RNG4 842 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 ERC2O15083 957 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 COL9A1P20849 921 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 HMGB2P26583 209 aaKnown RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 GTF2E1P29083 439 aaPredicted RBP8.51□□□□□ -1.05
PTCD2-201ENST00000308077 TIMM10P62072 90 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 TPTE2Q6XPS3 522 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 RILPL2Q969X0 211 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 GPATCH3Q96I76 525 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 CEP126Q9P2H0 1117 aa8.51□□□□□ -1.05
PTCD2-201ENST00000308077 NRXN2Q9P2S2 1712 aa8.5□□□□□ -1.05
PTCD2-201ENST00000308077 A0A1B0GUL7 405 aa8.5□□□□□ -1.05
PTCD2-201ENST00000308077 HSPA8P11142 646 aaKnown RBP8.5□□□□□ -1.05
PTCD2-201ENST00000308077 DDR1Q08345 913 aa8.5□□□□□ -1.05
PTCD2-201ENST00000308077 CNNM1Q9NRU3 951 aa8.5□□□□□ -1.05
PTCD2-201ENST00000308077 POLRMTO00411 1230 aaKnown RBP8.49□□□□□ -1.05
PTCD2-201ENST00000308077 METTL24Q5JXM2 366 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 PRR5LQ6MZQ0 368 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 NEUROD6Q96NK8 337 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 BOLA2Q9H3K6 86 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 ANKRD31Q8N7Z5 1873 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 SERPINB2P05120 415 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 ATP5JP18859 108 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 CHMLP26374 656 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 ADORA1P30542 326 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 CNBD1Q8NA66 436 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 TBC1D32Q96NH3 1257 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms