RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 AFMP43652 599 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 IMPG2Q9BZV3 1241 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 TFIP11Q9UBB9 837 aaKnown RBP15.17■□□□□ 0.02
TRIM56-201ENST00000306085 WHAMMP3Q1A5X7 153 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 GTF3C6Q969F1 213 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 PPME1Q9Y570 386 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 PHLDB2Q86SQ0 1253 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 USP37Q86T82 979 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 PPP1R21Q6ZMI0 780 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 WDR46O15213 610 aaKnown RBP15.16■□□□□ 0.02
TRIM56-201ENST00000306085 ZNF365Q70YC5 407 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 SKILP12757 684 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 GBP5Q96PP8 586 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 RMND1Q9NWS8 449 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
TRIM56-201ENST00000306085 PPFIA3O75145 1194 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 TAF12Q16514 161 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 RRAGBQ5VZM2 374 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 TPX2Q9ULW0 747 aaKnown RBP15.16■□□□□ 0.02
TRIM56-201ENST00000306085 E7EVH7 732 aa15.16■□□□□ 0.02
TRIM56-201ENST00000306085 PYM1Q9BRP8 204 aaKnown RBP15.16■□□□□ 0.02
TRIM56-201ENST00000306085 LMBR1Q8WVP7 490 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 ATP5DP30049 168 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 GABPAQ06546 454 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 IGSF3O75054 1194 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 GJB2P29033 226 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 BAG1Q99933 345 aaPredicted RBP15.15■□□□□ 0.02
TRIM56-201ENST00000306085 MRPL46Q9H2W6 279 aaKnown RBP15.15■□□□□ 0.02
TRIM56-201ENST00000306085 ZNF213O14771 459 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 GIPC1O14908 333 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 FHOD3Q2V2M9 1422 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 ERMNQ8TAM6 284 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 SULT6B1Q6IMI4 303 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM56-201ENST00000306085 MPHOSPH6Q99547 160 aaKnown RBP15.15■□□□□ 0.02
TRIM56-201ENST00000306085 SYT1P21579 422 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 ZC3H6P61129 1189 aaKnown RBP15.15■□□□□ 0.02
TRIM56-201ENST00000306085 MICU3Q86XE3 530 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 TNPO1Q92973 898 aaKnown RBP15.15■□□□□ 0.02
TRIM56-201ENST00000306085 ZC4H2Q9NQZ6 224 aa15.15■□□□□ 0.02
TRIM56-201ENST00000306085 CCDC38Q502W7 563 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 GUCA1BQ9UMX6 200 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 AKNAD1Q5T1N1 836 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 AFAP1L2Q8N4X5 818 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 MX1P20591 662 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 VAV2P52735 878 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 KIFC2Q96AC6 838 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 USH1CQ9Y6N9 552 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 MAP3K12Q12852 859 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 VCX3AQ9NNX9 186 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 SYKP43405 635 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 CCDC7Q96M83 1385 aa15.14■□□□□ 0.01
TRIM56-201ENST00000306085 FAM13AO94988 1023 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 PPARDQ03181 441 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 ITIH3Q06033 890 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 ANO6Q4KMQ2 910 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 CLSTN2Q9H4D0 955 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 AFG3L2Q9Y4W6 797 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 ZPR1O75312 459 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
TRIM56-201ENST00000306085 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 TMEM67Q5HYA8 995 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 TRIM68Q6AZZ1 485 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 ZBTB17Q13105 803 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 RNF41Q9H4P4 317 aaPredicted RBP15.13■□□□□ 0.01
TRIM56-201ENST00000306085 KRT86O43790 486 aa15.13■□□□□ 0.01
TRIM56-201ENST00000306085 CCDC94Q9BW85 323 aaPredicted RBP15.13■□□□□ 0.01
TRIM56-201ENST00000306085 VGLL3A8MV65 326 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-201ENST00000306085 LRRC27Q9C0I9 530 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 HDXQ7Z353 690 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 CCDC117Q8IWD4 279 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-201ENST00000306085 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 TRPC3Q13507 836 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 SPECC1L-ADORA2AF8WAN1 911 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 VPS41P49754 854 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 GIMAP6Q6P9H5 292 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 GPR161Q8N6U8 529 aaKnown RBP15.12■□□□□ 0.01
TRIM56-201ENST00000306085 AFAP1L1Q8TED9 768 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 SLC26A6Q9BXS9 759 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 TRIM6Q9C030 488 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-201ENST00000306085 UBE2HP62256 183 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 ZSCAN23Q3MJ62 389 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 CCDC122Q5T0U0 273 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 HVCN1Q96D96 273 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 PPP2R5DQ14738 602 aa15.12■□□□□ 0.01
TRIM56-201ENST00000306085 IFIT1P09914 478 aaKnown RBP15.11■□□□□ 0.01
TRIM56-201ENST00000306085 MX2P20592 715 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 LZTFL1Q9NQ48 299 aa15.11■□□□□ 0.01
TRIM56-201ENST00000306085 MCM7P33993 719 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms