RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
SCG2-201ENST00000305409 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.66□□□□□ -0.22
SCG2-201ENST00000305409 SLIT2O94813 1529 aa13.66□□□□□ -0.22
SCG2-201ENST00000305409 ANKRD18BA2A2Z9 1011 aa13.66□□□□□ -0.22
SCG2-201ENST00000305409 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
SCG2-201ENST00000305409 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
SCG2-201ENST00000305409 LIMCH1Q9UPQ0 1083 aa13.66□□□□□ -0.22
SCG2-201ENST00000305409 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
SCG2-201ENST00000305409 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 CAMTA2O94983 1202 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 MCMDC2Q4G0Z9 681 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 NIP7Q9Y221 180 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCG2-201ENST00000305409 PRPF40AO75400 957 aaKnown RBP13.65□□□□□ -0.22
SCG2-201ENST00000305409 ZAP70P43403 619 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 CCDC158Q5M9N0 1113 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 LRRC2Q9BYS8 371 aa13.65□□□□□ -0.22
SCG2-201ENST00000305409 PDE8AO60658 829 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 ATP2B3Q16720 1220 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 ME3Q16798 604 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 USP21Q9UK80 565 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 TPCN1Q9ULQ1 816 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
SCG2-201ENST00000305409 LRP6O75581 1613 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 STK3Q13188 491 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 KCNB2Q92953 911 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 GDPD2Q9HCC8 539 aa13.64□□□□□ -0.23
SCG2-201ENST00000305409 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 BCL9LQ86UU0 1499 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 GOLGA6L22H0YM25 854 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 CCDC24Q8N4L8 307 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 M0R2C6 588 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 CYP21A2P08686 494 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 WASHC4Q2M389 1173 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 OSBP2Q969R2 916 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
SCG2-201ENST00000305409 UTP14AQ9BVJ6 771 aaKnown RBP13.63□□□□□ -0.23
SCG2-201ENST00000305409 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
SCG2-201ENST00000305409 BRD1O95696 1058 aa13.62□□□□□ -0.23
SCG2-201ENST00000305409 VPS72Q15906 364 aa13.62□□□□□ -0.23
SCG2-201ENST00000305409 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
SCG2-201ENST00000305409 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
SCG2-201ENST00000305409 LMBRD1Q9NUN5 540 aa13.62□□□□□ -0.23
SCG2-201ENST00000305409 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
SCG2-201ENST00000305409 MCAMP43121 646 aa13.62□□□□□ -0.23
SCG2-201ENST00000305409 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 MAST3O60307 1309 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 RNF113AO15541 343 aaKnown RBP13.61□□□□□ -0.23
SCG2-201ENST00000305409 PHKA1P46020 1223 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 TM6SF1Q9BZW5 370 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 SMC3Q9UQE7 1217 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 MYH14Q7Z406 1995 aaKnown RBP13.61□□□□□ -0.23
SCG2-201ENST00000305409 WTIPA6NIX2 430 aaPredicted RBP13.61□□□□□ -0.23
SCG2-201ENST00000305409 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 CLEC17AQ6ZS10 378 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 STOX1Q6ZVD7 989 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 CHST3Q7LGC8 479 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 UBE2Q2Q8WVN8 375 aa13.61□□□□□ -0.23
SCG2-201ENST00000305409 RBM27Q9P2N5 1060 aaKnown RBP13.61□□□□□ -0.23
SCG2-201ENST00000305409 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
SCG2-201ENST00000305409 PPFIA3O75145 1194 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 RPS6KB1P23443 525 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 PSMA5P28066 241 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 GAS2L3Q86XJ1 694 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 SRP68Q9UHB9 627 aaKnown RBP13.6□□□□□ -0.23
SCG2-201ENST00000305409 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 PDE8BO95263 885 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 HSPD1P10809 573 aaKnown RBP13.6□□□□□ -0.23
SCG2-201ENST00000305409 GJB2P29033 226 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 HAND2P61296 217 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
SCG2-201ENST00000305409 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
SCG2-201ENST00000305409 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 VGLL2Q8N8G2 317 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 PANK2Q9BZ23 570 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
SCG2-201ENST00000305409 JCADQ9P266 1359 aa13.6□□□□□ -0.23
SCG2-201ENST00000305409 SYT1P21579 422 aa13.59□□□□□ -0.23
SCG2-201ENST00000305409 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
SCG2-201ENST00000305409 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
SCG2-201ENST00000305409 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
SCG2-201ENST00000305409 NEK1Q96PY6 1258 aa13.59□□□□□ -0.23
SCG2-201ENST00000305409 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
SCG2-201ENST00000305409 PUS7LQ9H0K6 701 aaKnown RBP13.59□□□□□ -0.23
SCG2-201ENST00000305409 NUP98P52948 1817 aa13.59□□□□□ -0.23
SCG2-201ENST00000305409 WNK3Q9BYP7 1800 aa13.59□□□□□ -0.23
SCG2-201ENST00000305409 NTSR2O95665 410 aa13.59□□□□□ -0.23
SCG2-201ENST00000305409 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.24
SCG2-201ENST00000305409 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
SCG2-201ENST00000305409 CCDC102BQ68D86 513 aa13.58□□□□□ -0.24
SCG2-201ENST00000305409 FNBP4Q8N3X1 1017 aaPredicted RBP13.58□□□□□ -0.24
SCG2-201ENST00000305409 GPT2Q8TD30 523 aa13.58□□□□□ -0.24
SCG2-201ENST00000305409 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.24
SCG2-201ENST00000305409 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms