RNA–Protein interactions for RNA: ENST00000304101.8

KCNS3-201, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-201ENST00000304101 TRIM28Q13263 835 aaKnown RBP24.58■■□□□ 1.53
KCNS3-201ENST00000304101 VPS53Q5VIR6 699 aa24.58■■□□□ 1.53
KCNS3-201ENST00000304101 SUSD4Q5VX71 490 aa24.58■■□□□ 1.53
KCNS3-201ENST00000304101 ZNF34Q8IZ26 560 aa24.58■■□□□ 1.53
KCNS3-201ENST00000304101 ZSWIM6Q9HCJ5 1215 aa24.58■■□□□ 1.53
KCNS3-201ENST00000304101 ADCK5Q3MIX3 580 aa24.58■■□□□ 1.53
KCNS3-201ENST00000304101 HSP90AB3PQ58FF7 597 aa24.58■■□□□ 1.53
KCNS3-201ENST00000304101 ZBTB38Q8NAP3 1195 aaPredicted RBP24.58■■□□□ 1.53
KCNS3-201ENST00000304101 CYP46A1Q9Y6A2 500 aa24.58■■□□□ 1.53
KCNS3-201ENST00000304101 MED23Q9ULK4 1368 aa24.58■■□□□ 1.52
KCNS3-201ENST00000304101 LY75O60449 1722 aa24.58■■□□□ 1.52
KCNS3-201ENST00000304101 WDR33Q9C0J8 1336 aaKnown RBP24.57■■□□□ 1.52
KCNS3-201ENST00000304101 CAVIN1Q6NZI2 390 aaKnown RBP24.57■■□□□ 1.52
KCNS3-201ENST00000304101 NIP7Q9Y221 180 aaKnown RBP eCLIP24.57■■□□□ 1.52
KCNS3-201ENST00000304101 CPA1P15085 419 aa24.57■■□□□ 1.52
KCNS3-201ENST00000304101 USPL1Q5W0Q7 1092 aa24.57■■□□□ 1.52
KCNS3-201ENST00000304101 CREB3L3Q68CJ9 461 aa24.57■■□□□ 1.52
KCNS3-201ENST00000304101 ZNF594Q96JF6 807 aaPredicted RBP24.57■■□□□ 1.52
KCNS3-201ENST00000304101 PDRG1Q9NUG6 133 aa24.57■■□□□ 1.52
KCNS3-201ENST00000304101 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.57■■□□□ 1.52
KCNS3-201ENST00000304101 PCCAP05165 728 aaPredicted RBP24.56■■□□□ 1.52
KCNS3-201ENST00000304101 PROM2Q8N271 834 aa24.56■■□□□ 1.52
KCNS3-201ENST00000304101 CHAMP1Q96JM3 812 aa24.56■■□□□ 1.52
KCNS3-201ENST00000304101 ZNF831Q5JPB2 1677 aa24.56■■□□□ 1.52
KCNS3-201ENST00000304101 RPS6KA4O75676 772 aa24.56■■□□□ 1.52
KCNS3-201ENST00000304101 RTCBQ9Y3I0 505 aaKnown RBP24.55■■□□□ 1.52
KCNS3-201ENST00000304101 APBA3O96018 575 aa24.55■■□□□ 1.52
KCNS3-201ENST00000304101 ZNF445P59923 1031 aa24.55■■□□□ 1.52
KCNS3-201ENST00000304101 RNF20Q5VTR2 975 aa24.55■■□□□ 1.52
KCNS3-201ENST00000304101 FAM43AQ8N2R8 423 aa24.55■■□□□ 1.52
KCNS3-201ENST00000304101 GPT2Q8TD30 523 aa24.55■■□□□ 1.52
KCNS3-201ENST00000304101 ARHGEF1Q92888 912 aaKnown RBP24.55■■□□□ 1.52
KCNS3-201ENST00000304101 AK7Q96M32 723 aa24.55■■□□□ 1.52
KCNS3-201ENST00000304101 DBNDD2Q9BQY9 259 aa24.55■■□□□ 1.52
KCNS3-201ENST00000304101 RFX7Q2KHR2 1363 aa24.54■■□□□ 1.52
KCNS3-201ENST00000304101 RC3H1Q5TC82 1133 aaKnown RBP24.54■■□□□ 1.52
KCNS3-201ENST00000304101 EDC3Q96F86 508 aaKnown RBP24.54■■□□□ 1.52
KCNS3-201ENST00000304101 BCL2L12Q9HB09 334 aa24.54■■□□□ 1.52
KCNS3-201ENST00000304101 HCLS1P14317 486 aaPredicted RBP24.53■■□□□ 1.52
KCNS3-201ENST00000304101 ZSCAN23Q3MJ62 389 aa24.53■■□□□ 1.52
KCNS3-201ENST00000304101 ZSCAN31Q96LW9 406 aaPredicted RBP24.53■■□□□ 1.52
KCNS3-201ENST00000304101 LARP6Q9BRS8 491 aaKnown RBP24.53■■□□□ 1.52
KCNS3-201ENST00000304101 IRS4O14654 1257 aaPredicted RBP24.53■■□□□ 1.52
KCNS3-201ENST00000304101 SLC27A2O14975 620 aa24.53■■□□□ 1.52
KCNS3-201ENST00000304101 RPAP1Q9BWH6 1393 aaPredicted RBP24.53■■□□□ 1.52
KCNS3-201ENST00000304101 PSMA5P28066 241 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 SH2B1Q9NRF2 756 aaPredicted RBP24.52■■□□□ 1.52
KCNS3-201ENST00000304101 C4BP0C0L5 1744 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 ANKRD36CQ5JPF3 1778 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 TAF1LQ8IZX4 1826 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 MBD3O95983 291 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 TXNRD1Q16881 649 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 TBC1D9BQ66K14 1250 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 ZNF589Q86UQ0 364 aaPredicted RBP24.52■■□□□ 1.52
KCNS3-201ENST00000304101 HAUS7Q99871 368 aa24.52■■□□□ 1.52
KCNS3-201ENST00000304101 ATG9AQ7Z3C6 839 aa24.51■■□□□ 1.51
KCNS3-201ENST00000304101 SMC3Q9UQE7 1217 aa24.51■■□□□ 1.51
KCNS3-201ENST00000304101 IL15P40933 162 aaPredicted RBP24.51■■□□□ 1.51
KCNS3-201ENST00000304101 DNAJC2Q99543 621 aaKnown RBP24.51■■□□□ 1.51
KCNS3-201ENST00000304101 GPR108Q9NPR9 543 aa24.51■■□□□ 1.51
KCNS3-201ENST00000304101 CCDC24Q8N4L8 307 aa24.5■■□□□ 1.51
KCNS3-201ENST00000304101 HMG20BQ9P0W2 317 aa24.5■■□□□ 1.51
KCNS3-201ENST00000304101 LARGE1O95461 756 aa24.5■■□□□ 1.51
KCNS3-201ENST00000304101 ZPR1O75312 459 aa24.49■■□□□ 1.51
KCNS3-201ENST00000304101 UTP14AQ9BVJ6 771 aaKnown RBP24.49■■□□□ 1.51
KCNS3-201ENST00000304101 PUS3Q9BZE2 481 aaKnown RBP24.49■■□□□ 1.51
KCNS3-201ENST00000304101 TAF5LO75529 589 aa24.49■■□□□ 1.51
KCNS3-201ENST00000304101 LRRC24Q50LG9 513 aa24.49■■□□□ 1.51
KCNS3-201ENST00000304101 GREM2Q9H772 168 aa24.49■■□□□ 1.51
KCNS3-201ENST00000304101 NARFQ9UHQ1 456 aa24.49■■□□□ 1.51
KCNS3-201ENST00000304101 ZNF652Q9Y2D9 606 aa24.49■■□□□ 1.51
KCNS3-201ENST00000304101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.48■■□□□ 1.51
KCNS3-201ENST00000304101 NDUFB9Q9Y6M9 179 aa24.48■■□□□ 1.51
KCNS3-201ENST00000304101 EYA2O00167 538 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 RFC4P35249 363 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 TRAPPC3LQ5T215 181 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 CCDC83Q8IWF9 413 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 STX6O43752 255 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 NTSR2O95665 410 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 ZSCAN22P10073 491 aaPredicted RBP24.47■■□□□ 1.51
KCNS3-201ENST00000304101 SYT1P21579 422 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 BLOC1S2Q6QNY1 142 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 NEUROD6Q96NK8 337 aa24.47■■□□□ 1.51
KCNS3-201ENST00000304101 SH3TC1Q8TE82 1336 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 CDHR2Q9BYE9 1310 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 CIAO1O76071 339 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 CTSWP56202 376 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 TSGA10IPQ3SY00 556 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 TTLL11Q8NHH1 800 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 CCDC57Q2TAC2 916 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 SLC27A3Q5K4L6 730 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
KCNS3-201ENST00000304101 KBTBD3Q8NAB2 608 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 RBM27Q9P2N5 1060 aaKnown RBP24.46■■□□□ 1.51
KCNS3-201ENST00000304101 BCORQ6W2J9 1755 aa24.46■■□□□ 1.51
KCNS3-201ENST00000304101 ZNF609O15014 1411 aa24.45■■□□□ 1.51
KCNS3-201ENST00000304101 NASPP49321 788 aaPredicted RBP24.45■■□□□ 1.51
KCNS3-201ENST00000304101 ANKRD1Q15327 319 aa24.45■■□□□ 1.51
KCNS3-201ENST00000304101 TMEM63CQ9P1W3 806 aa24.45■■□□□ 1.51
KCNS3-201ENST00000304101 ME3Q16798 604 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms