RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 CNNM1Q9NRU3 951 aa10.98□□□□□ -0.65
VPREB1-201ENST00000302273 XDHP47989 1333 aa10.98□□□□□ -0.65
VPREB1-201ENST00000302273 RAB11FIP3O75154 756 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 PDE8BO95263 885 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 G3BP1Q13283 466 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 HDAC1Q13547 482 aaPredicted RBP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 UBE4AQ14139 1066 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 DPP8Q6V1X1 898 aaPredicted RBP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 C15orf52Q6ZUT6 534 aaKnown RBP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 CCDC85AQ96PX6 553 aaPredicted RBP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 TAOK3Q9H2K8 898 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 ANKIB1Q9P2G1 1089 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 NSFL1CQ9UNZ2 370 aaKnown RBP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 AKAP2Q9Y2D5 859 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
VPREB1-201ENST00000302273 LAMB2P55268 1798 aa10.97□□□□□ -0.65
VPREB1-201ENST00000302273 ANKRD31Q8N7Z5 1873 aa10.96□□□□□ -0.65
VPREB1-201ENST00000302273 PNMA6EA0A0J9YXQ4 647 aa10.96□□□□□ -0.65
VPREB1-201ENST00000302273 CHRNDQ07001 517 aa10.96□□□□□ -0.65
VPREB1-201ENST00000302273 RWDD1Q9H446 243 aaPredicted RBP10.96□□□□□ -0.65
VPREB1-201ENST00000302273 GPR108Q9NPR9 543 aa10.96□□□□□ -0.65
VPREB1-201ENST00000302273 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
VPREB1-201ENST00000302273 GGA1Q9UJY5 639 aa10.96□□□□□ -0.65
VPREB1-201ENST00000302273 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
VPREB1-201ENST00000302273 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
VPREB1-201ENST00000302273 SURF6O75683 361 aaKnown RBP10.95□□□□□ -0.66
VPREB1-201ENST00000302273 YBX3P16989 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPREB1-201ENST00000302273 LMNB1P20700 586 aa10.95□□□□□ -0.66
VPREB1-201ENST00000302273 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
VPREB1-201ENST00000302273 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
VPREB1-201ENST00000302273 GCC1Q96CN9 775 aa10.95□□□□□ -0.66
VPREB1-201ENST00000302273 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
VPREB1-201ENST00000302273 DCTPP1Q9H773 170 aa10.95□□□□□ -0.66
VPREB1-201ENST00000302273 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
VPREB1-201ENST00000302273 TNRC6CQ9HCJ0 1690 aaKnown RBP10.95□□□□□ -0.66
VPREB1-201ENST00000302273 ZNF804BA4D1E1 1349 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 IGSF3O75054 1194 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 KIAA2012Q0VF49 1180 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 PUM3Q15397 648 aaKnown RBP10.94□□□□□ -0.66
VPREB1-201ENST00000302273 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 METTL24Q5JXM2 366 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 ATG9AQ7Z3C6 839 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 SIRT2Q8IXJ6 389 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 KIAA1551Q9HCM1 1747 aa10.94□□□□□ -0.66
VPREB1-201ENST00000302273 MMP14P50281 582 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 GPSM2P81274 684 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 PODNQ7Z5L7 613 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 VGLL2Q8N8G2 317 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 JDP2Q8WYK2 163 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 LPIN2Q92539 896 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 KIF1BPQ96EK5 621 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 ZNF594Q96JF6 807 aaPredicted RBP10.93□□□□□ -0.66
VPREB1-201ENST00000302273 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
VPREB1-201ENST00000302273 MED23Q9ULK4 1368 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 NFKBIEO00221 500 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 IFIT1P09914 478 aaKnown RBP10.92□□□□□ -0.66
VPREB1-201ENST00000302273 IARSP41252 1262 aaKnown RBP10.92□□□□□ -0.66
VPREB1-201ENST00000302273 KCNJ4P48050 445 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 LRRC24Q50LG9 513 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 CAVIN4Q5BKX8 364 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 ZNF784Q8NCA9 323 aaPredicted RBP10.92□□□□□ -0.66
VPREB1-201ENST00000302273 EXOC6Q8TAG9 804 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 POLLQ9UGP5 575 aa10.92□□□□□ -0.66
VPREB1-201ENST00000302273 UFL1O94874 794 aa10.91□□□□□ -0.66
VPREB1-201ENST00000302273 SLC5A1P13866 664 aa10.91□□□□□ -0.66
VPREB1-201ENST00000302273 FGFR2P21802 821 aa10.91□□□□□ -0.66
VPREB1-201ENST00000302273 OS9Q13438 667 aaPredicted RBP10.91□□□□□ -0.66
VPREB1-201ENST00000302273 CLASRPQ8N2M8 674 aaKnown RBP10.91□□□□□ -0.66
VPREB1-201ENST00000302273 KLHDC4Q8TBB5 520 aa10.91□□□□□ -0.66
VPREB1-201ENST00000302273 PUS3Q9BZE2 481 aaKnown RBP10.91□□□□□ -0.66
VPREB1-201ENST00000302273 COL11A2P13942 1736 aaPredicted RBP10.9□□□□□ -0.66
VPREB1-201ENST00000302273 MYH3P11055 1940 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 BRCA1P38398 1863 aaKnown RBP10.9□□□□□ -0.66
VPREB1-201ENST00000302273 SEMA3EO15041 775 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 SASH1O94885 1247 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 ZNF804AQ7Z570 1209 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 SMC5Q8IY18 1101 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 ZNF512BQ96KM6 892 aaPredicted RBP10.9□□□□□ -0.66
VPREB1-201ENST00000302273 LRRCC1Q9C099 1032 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 SIL1Q9H173 461 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 GNL3LQ9NVN8 582 aaKnown RBP10.9□□□□□ -0.66
VPREB1-201ENST00000302273 ZNRF3Q9ULT6 936 aa10.9□□□□□ -0.66
VPREB1-201ENST00000302273 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
VPREB1-201ENST00000302273 SLX4Q8IY92 1834 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 ARFGEF1Q9Y6D6 1849 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 G3V3G9 751 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 FZD9O00144 591 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 PPIP5K2O43314 1243 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 TAF5LO75529 589 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 IL1R1P14778 569 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 ATP2B3Q16720 1220 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
VPREB1-201ENST00000302273 NIM1KQ8IY84 436 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms