RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 USP44Q9H0E7 712 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 NEO1Q92859 1461 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
PDGFD-201ENST00000302251 ARID5BQ14865 1188 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 ERO1AQ96HE7 468 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 CEP126Q9P2H0 1117 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 TPCN1Q9ULQ1 816 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 IFIT1P09914 478 aaKnown RBP14.06□□□□□ -0.16
PDGFD-201ENST00000302251 ZC3H6P61129 1189 aaKnown RBP14.06□□□□□ -0.16
PDGFD-201ENST00000302251 CARD6Q9BX69 1037 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 PUF60Q9UHX1 559 aaKnown RBP14.06□□□□□ -0.16
PDGFD-201ENST00000302251 PIK3R4Q99570 1358 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 CENPHQ9H3R5 247 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 A0A087WZG4 1122 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 MARCH6O60337 910 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 CLSTN2Q9H4D0 955 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 YEATS2Q9ULM3 1422 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 SLC27A2O14975 620 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 PTPN21Q16825 1174 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
PDGFD-201ENST00000302251 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 LZTFL1Q9NQ48 299 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 MAP3K19Q56UN5 1328 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 PTPDC1A2A3K4 754 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 KIF5CO60282 957 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 GPATCH11Q8N954 259 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 RSPH14Q9UHP6 348 aa14.05□□□□□ -0.16
PDGFD-201ENST00000302251 ZFYVE9O95405 1425 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 SYKP43405 635 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 CCDC150Q8NCX0 1101 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 SLC39A6Q13433 755 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 HSP90AB3PQ58FF7 597 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 MRVI1Q9Y6F6 885 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 ZBTB22O15209 634 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
PDGFD-201ENST00000302251 DDIT3P35638 169 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 IPO4Q8TEX9 1081 aaKnown RBP14.04□□□□□ -0.16
PDGFD-201ENST00000302251 AMOTL2Q9Y2J4 779 aa14.04□□□□□ -0.16
PDGFD-201ENST00000302251 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 KLF18A0A0U1RQI7 1052 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 CLSTN1O94985 981 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 RXRAP19793 462 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 EVCP57679 992 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 DEF6Q9H4E7 631 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 HYPKQ9NX55 129 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 CAPN2P17655 700 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 DNA2P51530 1060 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 KRBA2Q6ZNG9 492 aa14.03□□□□□ -0.16
PDGFD-201ENST00000302251 GABPB1Q06547 395 aaPredicted RBP14.03□□□□□ -0.16
PDGFD-201ENST00000302251 CYP2E1P05181 493 aaPredicted RBP14.02□□□□□ -0.16
PDGFD-201ENST00000302251 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.16
PDGFD-201ENST00000302251 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.16
PDGFD-201ENST00000302251 TRIM22Q8IYM9 498 aa14.02□□□□□ -0.16
PDGFD-201ENST00000302251 NEK11Q8NG66 645 aa14.02□□□□□ -0.16
PDGFD-201ENST00000302251 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.16
PDGFD-201ENST00000302251 CCDC57Q2TAC2 916 aa14.02□□□□□ -0.17
PDGFD-201ENST00000302251 FTOQ9C0B1 505 aaKnown RBP eCLIP14.02□□□□□ -0.17
PDGFD-201ENST00000302251 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.17
PDGFD-201ENST00000302251 RHOXF2BP0C7M4 288 aa14.02□□□□□ -0.17
PDGFD-201ENST00000302251 CLEC17AQ6ZS10 378 aa14.02□□□□□ -0.17
PDGFD-201ENST00000302251 RHOXF2Q9BQY4 288 aa14.02□□□□□ -0.17
PDGFD-201ENST00000302251 CNNM1Q9NRU3 951 aa14.02□□□□□ -0.17
PDGFD-201ENST00000302251 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.02□□□□□ -0.17
PDGFD-201ENST00000302251 VPS18Q9P253 973 aa14.02□□□□□ -0.17
PDGFD-201ENST00000302251 GRM8O00222 908 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 SPTLC2O15270 562 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 RPS6KB1P23443 525 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
PDGFD-201ENST00000302251 LRRC8AQ8IWT6 810 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 CRACR2AQ9BSW2 395 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 MAP2P11137 1827 aaKnown RBP14.01□□□□□ -0.17
PDGFD-201ENST00000302251 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
PDGFD-201ENST00000302251 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 ALKQ9UM73 1620 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
PDGFD-201ENST00000302251 ZNF213O14771 459 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 STX17P56962 302 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 CCDC102BQ68D86 513 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 XPO4Q9C0E2 1151 aaKnown RBP14□□□□□ -0.17
PDGFD-201ENST00000302251 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 ZNF853P0CG23 659 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 NCBP1Q09161 790 aaKnown RBP14□□□□□ -0.17
PDGFD-201ENST00000302251 SART3Q15020 963 aaKnown RBP14□□□□□ -0.17
PDGFD-201ENST00000302251 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
PDGFD-201ENST00000302251 SRRTQ9BXP5 876 aaKnown RBP14□□□□□ -0.17
PDGFD-201ENST00000302251 DACH1Q9UI36 760 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 TTC41PQ6P2S7 1318 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 LRRC59Q96AG4 307 aaKnown RBP14□□□□□ -0.17
PDGFD-201ENST00000302251 FAM160A1Q05DH4 1040 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 MCMDC2Q4G0Z9 681 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 COPS6Q7L5N1 327 aa14□□□□□ -0.17
PDGFD-201ENST00000302251 BICC1Q9H694 974 aaKnown RBP14□□□□□ -0.17
PDGFD-201ENST00000302251 AFMP43652 599 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 TXLNBQ8N3L3 684 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms