RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 NBPF15Q8N660 670 aa28.49■■■□□ 2.15
FOXA3-201ENST00000302177 DSCC1Q9BVC3 393 aa28.49■■■□□ 2.15
FOXA3-201ENST00000302177 NUP62CLQ9H1M0 184 aa28.49■■■□□ 2.15
FOXA3-201ENST00000302177 ZSCAN16Q9H4T2 348 aaPredicted RBP28.49■■■□□ 2.15
FOXA3-201ENST00000302177 MAP3K11Q16584 847 aa28.48■■■□□ 2.15
FOXA3-201ENST00000302177 FERMT3Q86UX7 667 aa28.48■■■□□ 2.15
FOXA3-201ENST00000302177 SPATA32Q96LK8 384 aa28.48■■■□□ 2.15
FOXA3-201ENST00000302177 DDX19AQ9NUU7 478 aaKnown RBP28.48■■■□□ 2.15
FOXA3-201ENST00000302177 Q6ZUG5 572 aa28.48■■■□□ 2.15
FOXA3-201ENST00000302177 CCDC191Q8NCU4 936 aa28.48■■■□□ 2.15
FOXA3-201ENST00000302177 PIBF1Q8WXW3 757 aa28.48■■■□□ 2.15
FOXA3-201ENST00000302177 PCDH11XQ9BZA7 1347 aa28.47■■■□□ 2.15
FOXA3-201ENST00000302177 PCDH11YQ9BZA8 1340 aa28.47■■■□□ 2.15
FOXA3-201ENST00000302177 GOLGA6L4A6NEF3 574 aa28.46■■■□□ 2.15
FOXA3-201ENST00000302177 LEO1Q8WVC0 666 aaPredicted RBP28.46■■■□□ 2.15
FOXA3-201ENST00000302177 CIAO1O76071 339 aa28.46■■■□□ 2.15
FOXA3-201ENST00000302177 SASS6Q6UVJ0 657 aa28.46■■■□□ 2.15
FOXA3-201ENST00000302177 RBM43Q6ZSC3 357 aaKnown RBP28.46■■■□□ 2.15
FOXA3-201ENST00000302177 DDX46Q7L014 1031 aaKnown RBP28.46■■■□□ 2.15
FOXA3-201ENST00000302177 SMARCC2Q8TAQ2 1214 aa28.46■■■□□ 2.15
FOXA3-201ENST00000302177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.46■■■□□ 2.15
FOXA3-201ENST00000302177 CHMP4CQ96CF2 233 aa28.46■■■□□ 2.15
FOXA3-201ENST00000302177 PAG1Q9NWQ8 432 aa28.46■■■□□ 2.15
FOXA3-201ENST00000302177 DTNBO60941 627 aa28.45■■■□□ 2.14
FOXA3-201ENST00000302177 STK3Q13188 491 aa28.45■■■□□ 2.14
FOXA3-201ENST00000302177 NKX1-1Q15270 411 aaPredicted RBP28.45■■■□□ 2.14
FOXA3-201ENST00000302177 DHX32Q7L7V1 743 aaKnown RBP28.45■■■□□ 2.14
FOXA3-201ENST00000302177 FAM200AQ8TCP9 573 aa28.45■■■□□ 2.14
FOXA3-201ENST00000302177 PFKFB2O60825 505 aa28.44■■■□□ 2.14
FOXA3-201ENST00000302177 TPRNQ4KMQ1 711 aa28.44■■■□□ 2.14
FOXA3-201ENST00000302177 ZCRB1Q8TBF4 217 aaKnown RBP28.44■■■□□ 2.14
FOXA3-201ENST00000302177 SEC62Q99442 399 aaKnown RBP28.44■■■□□ 2.14
FOXA3-201ENST00000302177 ZMYM1Q5SVZ6 1142 aa28.44■■■□□ 2.14
FOXA3-201ENST00000302177 CCDC129Q6ZRS4 1044 aa28.44■■■□□ 2.14
FOXA3-201ENST00000302177 AGXT2Q9BYV1 514 aa28.44■■■□□ 2.14
FOXA3-201ENST00000302177 EYA2O00167 538 aa28.43■■■□□ 2.14
FOXA3-201ENST00000302177 LIG1P18858 919 aa28.43■■■□□ 2.14
FOXA3-201ENST00000302177 RESTQ13127 1097 aa28.43■■■□□ 2.14
FOXA3-201ENST00000302177 CFAP45Q9UL16 551 aa28.43■■■□□ 2.14
FOXA3-201ENST00000302177 UBR2Q8IWV8 1755 aa28.43■■■□□ 2.14
FOXA3-201ENST00000302177 NUP188Q5SRE5 1749 aa28.43■■■□□ 2.14
FOXA3-201ENST00000302177 FAM173BQ6P4H8 233 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 NDUFB9Q9Y6M9 179 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 WDR17Q8IZU2 1322 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 SPEF2Q9C093 1822 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 UBE2Q2Q8WVN8 375 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 PDCL3Q9H2J4 239 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 FBXO3Q9UK99 471 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 KIF3AQ9Y496 699 aa28.42■■■□□ 2.14
FOXA3-201ENST00000302177 HSP90B1P14625 803 aaKnown RBP28.41■■■□□ 2.14
FOXA3-201ENST00000302177 BRF1Q92994 677 aa28.41■■■□□ 2.14
FOXA3-201ENST00000302177 NEUROD6Q96NK8 337 aa28.41■■■□□ 2.14
FOXA3-201ENST00000302177 TNMDQ9H2S6 317 aa28.41■■■□□ 2.14
FOXA3-201ENST00000302177 CHMP3Q9Y3E7 222 aa28.41■■■□□ 2.14
FOXA3-201ENST00000302177 HMGN5P82970 282 aaKnown RBP28.41■■■□□ 2.14
FOXA3-201ENST00000302177 EXOSC10Q01780 885 aaKnown RBP28.41■■■□□ 2.14
FOXA3-201ENST00000302177 NAA16Q6N069 864 aaPredicted RBP28.41■■■□□ 2.14
FOXA3-201ENST00000302177 TTLL7Q6ZT98 887 aa28.41■■■□□ 2.14
FOXA3-201ENST00000302177 CLSTN2Q9H4D0 955 aa28.41■■■□□ 2.14
FOXA3-201ENST00000302177 DACT1Q9NYF0 836 aa28.41■■■□□ 2.14
FOXA3-201ENST00000302177 TFIP11Q9UBB9 837 aaKnown RBP28.41■■■□□ 2.14
FOXA3-201ENST00000302177 H3BQV1 296 aa28.4■■■□□ 2.14
FOXA3-201ENST00000302177 DYNC1I1O14576 645 aa28.4■■■□□ 2.14
FOXA3-201ENST00000302177 JAK2O60674 1132 aa28.4■■■□□ 2.14
FOXA3-201ENST00000302177 TYRO3Q06418 890 aa28.4■■■□□ 2.14
FOXA3-201ENST00000302177 NOLC1Q14978 699 aaKnown RBP eCLIP28.4■■■□□ 2.14
FOXA3-201ENST00000302177 IFFO2Q5TF58 517 aa28.4■■■□□ 2.14
FOXA3-201ENST00000302177 MRVI1Q9Y6F6 885 aa28.4■■■□□ 2.14
FOXA3-201ENST00000302177 GOLGA6L6A8MZA4 724 aa28.39■■■□□ 2.14
FOXA3-201ENST00000302177 GOLIM4O00461 696 aa28.39■■■□□ 2.14
FOXA3-201ENST00000302177 SCRN1Q12765 414 aa28.39■■■□□ 2.14
FOXA3-201ENST00000302177 ATL3Q6DD88 541 aa28.39■■■□□ 2.14
FOXA3-201ENST00000302177 STOX1Q6ZVD7 989 aa28.39■■■□□ 2.14
FOXA3-201ENST00000302177 SPTLC3Q9NUV7 552 aa28.39■■■□□ 2.14
FOXA3-201ENST00000302177 NUTM2BA6NNL0 878 aaPredicted RBP28.39■■■□□ 2.13
FOXA3-201ENST00000302177 NUTM2EB1AL46 878 aaPredicted RBP28.39■■■□□ 2.13
FOXA3-201ENST00000302177 CAVIN2O95810 425 aa28.39■■■□□ 2.13
FOXA3-201ENST00000302177 LRRFIP1Q32MZ4 808 aaKnown RBP28.39■■■□□ 2.13
FOXA3-201ENST00000302177 NUTM2AQ8IVF1 878 aaPredicted RBP28.39■■■□□ 2.13
FOXA3-201ENST00000302177 FBXL16Q8N461 479 aa28.39■■■□□ 2.13
FOXA3-201ENST00000302177 KCPQ6ZWJ8 1503 aa28.38■■■□□ 2.13
FOXA3-201ENST00000302177 TJP1Q07157 1748 aa28.38■■■□□ 2.13
FOXA3-201ENST00000302177 UQCRHLA0A096LP55 91 aa28.38■■■□□ 2.13
FOXA3-201ENST00000302177 UQCRHP07919 91 aa28.38■■■□□ 2.13
FOXA3-201ENST00000302177 FGD1P98174 961 aa28.38■■■□□ 2.13
FOXA3-201ENST00000302177 PAPPAQ13219 1627 aa28.38■■■□□ 2.13
FOXA3-201ENST00000302177 RNF113AO15541 343 aaKnown RBP28.37■■■□□ 2.13
FOXA3-201ENST00000302177 TIMM10P62072 90 aa28.37■■■□□ 2.13
FOXA3-201ENST00000302177 MAP7D2Q96T17 732 aa28.37■■■□□ 2.13
FOXA3-201ENST00000302177 AP5Z1O43299 807 aa28.37■■■□□ 2.13
FOXA3-201ENST00000302177 CHGBP05060 677 aa28.37■■■□□ 2.13
FOXA3-201ENST00000302177 IFIT1P09914 478 aaKnown RBP28.36■■■□□ 2.13
FOXA3-201ENST00000302177 GLIPR1L2Q4G1C9 344 aa28.36■■■□□ 2.13
FOXA3-201ENST00000302177 ZNF274Q96GC6 653 aaPredicted RBP28.36■■■□□ 2.13
FOXA3-201ENST00000302177 PGBD1Q96JS3 809 aa28.36■■■□□ 2.13
FOXA3-201ENST00000302177 PRIMPOLQ96LW4 560 aa28.36■■■□□ 2.13
FOXA3-201ENST00000302177 TTC12Q9H892 705 aaPredicted RBP28.36■■■□□ 2.13
FOXA3-201ENST00000302177 HSPD1P10809 573 aaKnown RBP28.35■■■□□ 2.13
FOXA3-201ENST00000302177 NSUN7Q8NE18 718 aaKnown RBP28.35■■■□□ 2.13
FOXA3-201ENST00000302177 TNS2Q63HR2 1409 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms