RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SGSM2O43147 1006 aa16.77■□□□□ 0.28
CDT1-201ENST00000301019 NBPF11Q86T75 865 aa16.77■□□□□ 0.28
CDT1-201ENST00000301019 WDR24Q96S15 920 aa16.77■□□□□ 0.28
CDT1-201ENST00000301019 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.28
CDT1-201ENST00000301019 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
CDT1-201ENST00000301019 FOXO3O43524 673 aa16.77■□□□□ 0.28
CDT1-201ENST00000301019 FAM193AP78312 1265 aa16.77■□□□□ 0.28
CDT1-201ENST00000301019 DHX40Q8IX18 779 aaKnown RBP16.77■□□□□ 0.28
CDT1-201ENST00000301019 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
CDT1-201ENST00000301019 ETF1P62495 437 aaKnown RBP16.77■□□□□ 0.27
CDT1-201ENST00000301019 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.27
CDT1-201ENST00000301019 DPCR1Q3MIW9 517 aa16.76■□□□□ 0.27
CDT1-201ENST00000301019 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
CDT1-201ENST00000301019 BRF1Q92994 677 aa16.76■□□□□ 0.27
CDT1-201ENST00000301019 KNDC1Q76NI1 1749 aa16.76■□□□□ 0.27
CDT1-201ENST00000301019 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
CDT1-201ENST00000301019 LONRF2Q1L5Z9 754 aa16.76■□□□□ 0.27
CDT1-201ENST00000301019 SCAND2PQ9GZW5 306 aaPredicted RBP16.76■□□□□ 0.27
CDT1-201ENST00000301019 L2HGDHQ9H9P8 463 aa16.76■□□□□ 0.27
CDT1-201ENST00000301019 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
CDT1-201ENST00000301019 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 TADA3O75528 432 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 FBXW10Q5XX13 1052 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 TTC19Q6DKK2 380 aaPredicted RBP16.75■□□□□ 0.27
CDT1-201ENST00000301019 POLD4Q9HCU8 107 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 BRD2P25440 801 aaKnown RBP16.75■□□□□ 0.27
CDT1-201ENST00000301019 STX1AQ16623 288 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 SULT6B1Q6IMI4 303 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 FAM227BQ96M60 508 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
CDT1-201ENST00000301019 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
CDT1-201ENST00000301019 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 ATP2B1P20020 1258 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
CDT1-201ENST00000301019 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 MRFAP1L1Q96HT8 127 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 CXorf56Q9H5V9 222 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 OSBPL3Q9H4L5 887 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 PIK3R4Q99570 1358 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 CEP57L1Q8IYX8 460 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 FUT8Q9BYC5 575 aa16.74■□□□□ 0.27
CDT1-201ENST00000301019 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 NME9Q86XW9 330 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
CDT1-201ENST00000301019 LZTFL1Q9NQ48 299 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 CFAP100Q494V2 611 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 OTUD7BQ6GQQ9 843 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 DNAAF4Q8WXU2 420 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
CDT1-201ENST00000301019 YY1AP1Q9H869 796 aa16.73■□□□□ 0.27
CDT1-201ENST00000301019 NCKAP5LQ9HCH0 1330 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 NEMFO60524 1076 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
CDT1-201ENST00000301019 DHX58Q96C10 678 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 SETD1BQ9UPS6 1966 aaKnown RBP16.72■□□□□ 0.27
CDT1-201ENST00000301019 A0A0U1RQJ8 604 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 CHGBP05060 677 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
CDT1-201ENST00000301019 MAGEA9P43362 315 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 RAB11FIP4Q86YS3 637 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 ATRIPQ8WXE1 791 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 DPF2Q92785 391 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 SUFUQ9UMX1 484 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 TBX22Q9Y458 520 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 TECPR2O15040 1411 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 FRMD3A2A2Y4 597 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 SRGAP3O43295 1099 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 SERPINC1P01008 464 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 RBM8AQ9Y5S9 174 aaKnown RBP16.72■□□□□ 0.27
CDT1-201ENST00000301019 PARP3Q9Y6F1 533 aa16.72■□□□□ 0.27
CDT1-201ENST00000301019 ZNF142P52746 1687 aaPredicted RBP16.71■□□□□ 0.27
CDT1-201ENST00000301019 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
CDT1-201ENST00000301019 ANKLE2Q86XL3 938 aa16.71■□□□□ 0.27
CDT1-201ENST00000301019 CCDC12Q8WUD4 166 aaPredicted RBP16.71■□□□□ 0.27
CDT1-201ENST00000301019 TMEM232C9JQI7 657 aa16.71■□□□□ 0.27
CDT1-201ENST00000301019 NRDCO43847 1150 aa16.71■□□□□ 0.27
CDT1-201ENST00000301019 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
CDT1-201ENST00000301019 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
CDT1-201ENST00000301019 AKAP2Q9Y2D5 859 aa16.71■□□□□ 0.27
CDT1-201ENST00000301019 CCDC172P0C7W6 258 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 MAP2K2P36507 400 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 HDGFL2Q7Z4V5 671 aaPredicted RBP16.7■□□□□ 0.26
CDT1-201ENST00000301019 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 CEP83Q9Y592 693 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 ADKP55263 362 aaKnown RBP16.7■□□□□ 0.26
CDT1-201ENST00000301019 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 EHD4Q9H223 541 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 FAM135BQ49AJ0 1406 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 CLGNO14967 610 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 CPLX3Q8WVH0 158 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
CDT1-201ENST00000301019 ANXA1P04083 346 aa16.69■□□□□ 0.26
CDT1-201ENST00000301019 POLR3DP05423 398 aaPredicted RBP16.69■□□□□ 0.26
CDT1-201ENST00000301019 PPP2R5AQ15172 486 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms