RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 CD2APQ9Y5K6 639 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 SEPT14Q6ZU15 432 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 GBP7Q8N8V2 638 aaPredicted RBP16.26■□□□□ 0.19
SPRED1-201ENST00000299084 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 UBAP1LF5GYI3 381 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 IFIT1BQ5T764 474 aaKnown RBP16.26■□□□□ 0.19
SPRED1-201ENST00000299084 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 NUTM1Q86Y26 1132 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 TOM1O60784 492 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 IRAK4Q9NWZ3 460 aa16.26■□□□□ 0.19
SPRED1-201ENST00000299084 RRS1Q15050 365 aaKnown RBP16.25■□□□□ 0.19
SPRED1-201ENST00000299084 TTC14Q96N46 770 aa16.25■□□□□ 0.19
SPRED1-201ENST00000299084 SP4Q02446 784 aa16.25■□□□□ 0.19
SPRED1-201ENST00000299084 HACE1Q8IYU2 909 aa16.25■□□□□ 0.19
SPRED1-201ENST00000299084 PRKRIP1Q9H875 184 aaPredicted RBP16.25■□□□□ 0.19
SPRED1-201ENST00000299084 NOP56O00567 594 aaKnown RBP16.25■□□□□ 0.19
SPRED1-201ENST00000299084 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 SRGAP1Q7Z6B7 1085 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 NR1I2O75469 434 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
SPRED1-201ENST00000299084 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.24■□□□□ 0.19
SPRED1-201ENST00000299084 STX10O60499 249 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 UTP14CQ5TAP6 766 aaKnown RBP16.24■□□□□ 0.19
SPRED1-201ENST00000299084 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 PPANQ9NQ55 473 aaKnown RBP16.24■□□□□ 0.19
SPRED1-201ENST00000299084 RBM27Q9P2N5 1060 aaKnown RBP16.24■□□□□ 0.19
SPRED1-201ENST00000299084 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
SPRED1-201ENST00000299084 PDE1CQ14123 709 aaPredicted RBP16.23■□□□□ 0.19
SPRED1-201ENST00000299084 RIOK1Q9BRS2 568 aaKnown RBP16.23■□□□□ 0.19
SPRED1-201ENST00000299084 STK25O00506 426 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 RAB11FIP4Q86YS3 637 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 PRKAG2Q9UGJ0 569 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 KCNA4P22459 653 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 PPME1Q9Y570 386 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 ARID4AP29374 1257 aaPredicted RBP16.23■□□□□ 0.19
SPRED1-201ENST00000299084 LDHAL6AQ6ZMR3 332 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 CEP57Q86XR8 500 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 LMBR1Q8WVP7 490 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 SWAP70Q9UH65 585 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 MAP7Q14244 749 aa16.23■□□□□ 0.19
SPRED1-201ENST00000299084 SYCE3A1L190 88 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 INF2Q27J81 1249 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 ZC3H12CQ9C0D7 883 aaKnown RBP16.22■□□□□ 0.19
SPRED1-201ENST00000299084 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
SPRED1-201ENST00000299084 METAP2P50579 478 aaKnown RBP eCLIP16.22■□□□□ 0.19
SPRED1-201ENST00000299084 CCT2P78371 535 aaKnown RBP16.22■□□□□ 0.19
SPRED1-201ENST00000299084 PPP1R21Q6ZMI0 780 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
SPRED1-201ENST00000299084 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
SPRED1-201ENST00000299084 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 FCHSD2O94868 740 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 WDR44Q5JSH3 913 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 KRT23Q9C075 422 aa16.22■□□□□ 0.19
SPRED1-201ENST00000299084 SPDYE16A6NNV3 312 aaPredicted RBP16.21■□□□□ 0.19
SPRED1-201ENST00000299084 KRT5P13647 590 aa16.21■□□□□ 0.19
SPRED1-201ENST00000299084 SPDYE2Q495Y8 402 aa16.21■□□□□ 0.19
SPRED1-201ENST00000299084 SLC26A6Q9BXS9 759 aa16.21■□□□□ 0.19
SPRED1-201ENST00000299084 SCAND2PQ9GZW5 306 aaPredicted RBP16.21■□□□□ 0.19
SPRED1-201ENST00000299084 FAM204AQ9H8W3 233 aa16.21■□□□□ 0.19
SPRED1-201ENST00000299084 ESYT2A0FGR8 921 aa16.21■□□□□ 0.19
SPRED1-201ENST00000299084 DACT3Q96B18 629 aaPredicted RBP16.21■□□□□ 0.19
SPRED1-201ENST00000299084 FNBP1Q96RU3 617 aa16.21■□□□□ 0.19
SPRED1-201ENST00000299084 KIF21BO75037 1637 aa16.21■□□□□ 0.19
SPRED1-201ENST00000299084 ATRIPQ8WXE1 791 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 AKR1B10O60218 316 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 GNAQP50148 359 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 PPFIBP2Q8ND30 876 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 MYOM3Q5VTT5 1437 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
SPRED1-201ENST00000299084 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 NAPAP54920 295 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 EIF6P56537 245 aaKnown RBP16.2■□□□□ 0.18
SPRED1-201ENST00000299084 ITIH3Q06033 890 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 SEPT8Q92599 483 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 OATP04181 439 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 CALML3P27482 149 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 ARHGEF6Q15052 776 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 HS2ST1Q7LGA3 356 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 SH2D4AQ9H788 454 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 PPP1R7Q15435 360 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 KIFAP3Q92845 792 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 NLRP3Q96P20 1036 aa16.2■□□□□ 0.18
SPRED1-201ENST00000299084 C16orf45Q96MC5 204 aaPredicted RBP16.19■□□□□ 0.18
SPRED1-201ENST00000299084 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
SPRED1-201ENST00000299084 MICU3Q86XE3 530 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 NUF2Q9BZD4 464 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 ESPNB1AK53 854 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 SLC5A4Q9NY91 659 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 SELENOSQ9BQE4 189 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 HSPA1LP34931 641 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 WTAPQ15007 396 aa16.19■□□□□ 0.18
SPRED1-201ENST00000299084 TRPC3Q13507 836 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms