RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 CYP21A2P08686 494 aa23.51■■□□□ 1.35
NFIL3-201ENST00000297689 IL15P40933 162 aaPredicted RBP23.51■■□□□ 1.35
NFIL3-201ENST00000297689 DNAJC2Q99543 621 aaKnown RBP23.51■■□□□ 1.35
NFIL3-201ENST00000297689 CCDC129Q6ZRS4 1044 aa23.5■■□□□ 1.35
NFIL3-201ENST00000297689 NEK1Q96PY6 1258 aa23.5■■□□□ 1.35
NFIL3-201ENST00000297689 ELP1O95163 1332 aa23.5■■□□□ 1.35
NFIL3-201ENST00000297689 VPS37CA5D8V6 355 aaPredicted RBP23.5■■□□□ 1.35
NFIL3-201ENST00000297689 CIAO1O76071 339 aa23.5■■□□□ 1.35
NFIL3-201ENST00000297689 DDX46Q7L014 1031 aaKnown RBP23.5■■□□□ 1.35
NFIL3-201ENST00000297689 CDC37L1Q7L3B6 337 aa23.5■■□□□ 1.35
NFIL3-201ENST00000297689 MCM5P33992 734 aa23.49■■□□□ 1.35
NFIL3-201ENST00000297689 ISCA1Q9BUE6 129 aa23.49■■□□□ 1.35
NFIL3-201ENST00000297689 ZBTB3Q9H5J0 574 aa23.49■■□□□ 1.35
NFIL3-201ENST00000297689 ZKSCAN5Q9Y2L8 839 aa23.49■■□□□ 1.35
NFIL3-201ENST00000297689 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.48■■□□□ 1.35
NFIL3-201ENST00000297689 EYA2O00167 538 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 ADAMTS2O95450 1211 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 MSNP26038 577 aaKnown RBP23.48■■□□□ 1.35
NFIL3-201ENST00000297689 DNAJC10Q8IXB1 793 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 LRP6O75581 1613 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 OFD1O75665 1012 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 TIMM10P62072 90 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 TTC6Q86TZ1 520 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 NAP1L5Q96NT1 182 aaPredicted RBP23.48■■□□□ 1.35
NFIL3-201ENST00000297689 HELLSQ9NRZ9 838 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
NFIL3-201ENST00000297689 LRRC24Q50LG9 513 aa23.47■■□□□ 1.35
NFIL3-201ENST00000297689 GTF3C6Q969F1 213 aa23.47■■□□□ 1.35
NFIL3-201ENST00000297689 PAG1Q9NWQ8 432 aa23.47■■□□□ 1.35
NFIL3-201ENST00000297689 SPEF2Q9C093 1822 aa23.47■■□□□ 1.35
NFIL3-201ENST00000297689 TRIM28Q13263 835 aaKnown RBP23.47■■□□□ 1.35
NFIL3-201ENST00000297689 ZMYM1Q5SVZ6 1142 aa23.47■■□□□ 1.35
NFIL3-201ENST00000297689 CCDC39Q9UFE4 941 aa23.47■■□□□ 1.35
NFIL3-201ENST00000297689 BCL9O00512 1426 aa23.46■■□□□ 1.35
NFIL3-201ENST00000297689 STOX1Q6ZVD7 989 aa23.46■■□□□ 1.35
NFIL3-201ENST00000297689 VSIG10Q8N0Z9 540 aa23.46■■□□□ 1.35
NFIL3-201ENST00000297689 DSCC1Q9BVC3 393 aa23.46■■□□□ 1.35
NFIL3-201ENST00000297689 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.35
NFIL3-201ENST00000297689 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.35
NFIL3-201ENST00000297689 KRT85P78386 507 aa23.45■■□□□ 1.35
NFIL3-201ENST00000297689 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.35
NFIL3-201ENST00000297689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.45■■□□□ 1.35
NFIL3-201ENST00000297689 CHMP3Q9Y3E7 222 aa23.45■■□□□ 1.35
NFIL3-201ENST00000297689 AGXT2Q9BYV1 514 aa23.45■■□□□ 1.34
NFIL3-201ENST00000297689 TCIRG1Q13488 830 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 Q6ZUG5 572 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 ZNF594Q96JF6 807 aaPredicted RBP23.44■■□□□ 1.34
NFIL3-201ENST00000297689 NEUROD6Q96NK8 337 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 SLC4A9Q96Q91 983 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 LAMA4Q16363 1823 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 GOLIM4O00461 696 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 EXOC5O00471 708 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 FBXO3Q9UK99 471 aa23.44■■□□□ 1.34
NFIL3-201ENST00000297689 FERMT3Q86UX7 667 aa23.43■■□□□ 1.34
NFIL3-201ENST00000297689 A0A1B0GUL7 405 aa23.42■■□□□ 1.34
NFIL3-201ENST00000297689 SLFNL1Q499Z3 407 aa23.42■■□□□ 1.34
NFIL3-201ENST00000297689 FAM173BQ6P4H8 233 aa23.42■■□□□ 1.34
NFIL3-201ENST00000297689 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
NFIL3-201ENST00000297689 PUS3Q9BZE2 481 aaKnown RBP23.42■■□□□ 1.34
NFIL3-201ENST00000297689 HMGB1P09429 215 aaKnown RBP23.42■■□□□ 1.34
NFIL3-201ENST00000297689 HCLS1P14317 486 aaPredicted RBP23.42■■□□□ 1.34
NFIL3-201ENST00000297689 EXOSC10Q01780 885 aaKnown RBP23.42■■□□□ 1.34
NFIL3-201ENST00000297689 STK3Q13188 491 aa23.42■■□□□ 1.34
NFIL3-201ENST00000297689 SMARCC2Q8TAQ2 1214 aa23.42■■□□□ 1.34
NFIL3-201ENST00000297689 PLA2G12BQ9BX93 195 aa23.42■■□□□ 1.34
NFIL3-201ENST00000297689 GIMAP6Q6P9H5 292 aa23.41■■□□□ 1.34
NFIL3-201ENST00000297689 SCAND2PQ9GZW5 306 aaPredicted RBP23.41■■□□□ 1.34
NFIL3-201ENST00000297689 DOT1LQ8TEK3 1739 aa23.41■■□□□ 1.34
NFIL3-201ENST00000297689 JAK2O60674 1132 aa23.4■■□□□ 1.34
NFIL3-201ENST00000297689 DHX32Q7L7V1 743 aaKnown RBP23.4■■□□□ 1.34
NFIL3-201ENST00000297689 SPATA31A1Q5TZJ5 1347 aa23.4■■□□□ 1.34
NFIL3-201ENST00000297689 PFKFB2O60825 505 aa23.4■■□□□ 1.34
NFIL3-201ENST00000297689 HSPD1P10809 573 aaKnown RBP23.4■■□□□ 1.34
NFIL3-201ENST00000297689 RNF113AO15541 343 aaKnown RBP23.39■■□□□ 1.34
NFIL3-201ENST00000297689 CSF1RP07333 972 aa23.39■■□□□ 1.34
NFIL3-201ENST00000297689 LLPHQ9BRT6 129 aaKnown RBP23.39■■□□□ 1.34
NFIL3-201ENST00000297689 MAST3O60307 1309 aa23.39■■□□□ 1.34
NFIL3-201ENST00000297689 SLIT2O94813 1529 aa23.39■■□□□ 1.33
NFIL3-201ENST00000297689 PCCAP05165 728 aaPredicted RBP23.39■■□□□ 1.33
NFIL3-201ENST00000297689 IFIT1P09914 478 aaKnown RBP23.39■■□□□ 1.33
NFIL3-201ENST00000297689 SCRN1Q12765 414 aa23.39■■□□□ 1.33
NFIL3-201ENST00000297689 RESTQ13127 1097 aa23.39■■□□□ 1.33
NFIL3-201ENST00000297689 ZNF330Q9Y3S2 320 aaPredicted RBP23.39■■□□□ 1.33
NFIL3-201ENST00000297689 STARD3NLO95772 234 aa23.38■■□□□ 1.33
NFIL3-201ENST00000297689 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.38■■□□□ 1.33
NFIL3-201ENST00000297689 LEO1Q8WVC0 666 aaPredicted RBP23.38■■□□□ 1.33
NFIL3-201ENST00000297689 BRF1Q92994 677 aa23.38■■□□□ 1.33
NFIL3-201ENST00000297689 CYP19A1P11511 503 aaPredicted RBP23.37■■□□□ 1.33
NFIL3-201ENST00000297689 LIG1P18858 919 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 TERF1P54274 439 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 CEP126Q9P2H0 1117 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 USP25Q9UHP3 1055 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 CCDC9Q9Y3X0 531 aaKnown RBP23.37■■□□□ 1.33
NFIL3-201ENST00000297689 KDM4AO75164 1064 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 HSPA1LP34931 641 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 FBXL16Q8N461 479 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 KAT6BQ8WYB5 2073 aa23.37■■□□□ 1.33
NFIL3-201ENST00000297689 NWD2Q9ULI1 1742 aa23.36■■□□□ 1.33
NFIL3-201ENST00000297689 CTDNEP1O95476 244 aa23.36■■□□□ 1.33
NFIL3-201ENST00000297689 RBM43Q6ZSC3 357 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms