RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
UBAP1-201ENST00000297661 GOLGA6L6A8MZA4 724 aa18.43■□□□□ 0.54
UBAP1-201ENST00000297661 UBE2HP62256 183 aa18.43■□□□□ 0.54
UBAP1-201ENST00000297661 VGLL3A8MV65 326 aa18.43■□□□□ 0.54
UBAP1-201ENST00000297661 SLC27A2O14975 620 aa18.43■□□□□ 0.54
UBAP1-201ENST00000297661 SLFN14P0C7P3 912 aa18.43■□□□□ 0.54
UBAP1-201ENST00000297661 ZNF496Q96IT1 587 aaPredicted RBP18.43■□□□□ 0.54
UBAP1-201ENST00000297661 GJD4Q96KN9 370 aaPredicted RBP18.43■□□□□ 0.54
UBAP1-201ENST00000297661 ATP5J2-PTCD1G3V325 749 aa18.42■□□□□ 0.54
UBAP1-201ENST00000297661 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
UBAP1-201ENST00000297661 DDX41Q9UJV9 622 aaKnown RBP18.42■□□□□ 0.54
UBAP1-201ENST00000297661 TRPC5Q9UL62 973 aaPredicted RBP18.42■□□□□ 0.54
UBAP1-201ENST00000297661 USP16Q9Y5T5 823 aa18.42■□□□□ 0.54
UBAP1-201ENST00000297661 NEURL1BA8MQ27 555 aa18.42■□□□□ 0.54
UBAP1-201ENST00000297661 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
UBAP1-201ENST00000297661 SYCP1Q15431 976 aa18.41■□□□□ 0.54
UBAP1-201ENST00000297661 SPATA31A1Q5TZJ5 1347 aa18.41■□□□□ 0.54
UBAP1-201ENST00000297661 CDC37L1Q7L3B6 337 aa18.41■□□□□ 0.54
UBAP1-201ENST00000297661 MAP4K1Q92918 833 aa18.41■□□□□ 0.54
UBAP1-201ENST00000297661 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
UBAP1-201ENST00000297661 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
UBAP1-201ENST00000297661 PTGS1P23219 599 aa18.4■□□□□ 0.54
UBAP1-201ENST00000297661 GCKRQ14397 625 aa18.4■□□□□ 0.54
UBAP1-201ENST00000297661 VPS72Q15906 364 aa18.4■□□□□ 0.54
UBAP1-201ENST00000297661 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
UBAP1-201ENST00000297661 KAT6BQ8WYB5 2073 aa18.4■□□□□ 0.54
UBAP1-201ENST00000297661 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
UBAP1-201ENST00000297661 NEXNQ0ZGT2 675 aa18.4■□□□□ 0.54
UBAP1-201ENST00000297661 NAA30Q147X3 362 aaPredicted RBP18.4■□□□□ 0.54
UBAP1-201ENST00000297661 CCDC129Q6ZRS4 1044 aa18.4■□□□□ 0.54
UBAP1-201ENST00000297661 C16orf45Q96MC5 204 aaPredicted RBP18.4■□□□□ 0.54
UBAP1-201ENST00000297661 CDK11BP21127 795 aaKnown RBP18.39■□□□□ 0.53
UBAP1-201ENST00000297661 LARP1BQ659C4 914 aaKnown RBP18.39■□□□□ 0.53
UBAP1-201ENST00000297661 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
UBAP1-201ENST00000297661 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
UBAP1-201ENST00000297661 SMTNL1A8MU46 457 aa18.39■□□□□ 0.53
UBAP1-201ENST00000297661 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
UBAP1-201ENST00000297661 BCL11BQ9C0K0 894 aaPredicted RBP18.39■□□□□ 0.53
UBAP1-201ENST00000297661 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
UBAP1-201ENST00000297661 TFCP2Q12800 502 aa18.38■□□□□ 0.53
UBAP1-201ENST00000297661 SLFNL1Q499Z3 407 aa18.38■□□□□ 0.53
UBAP1-201ENST00000297661 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
UBAP1-201ENST00000297661 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
UBAP1-201ENST00000297661 TM6SF1Q9BZW5 370 aa18.38■□□□□ 0.53
UBAP1-201ENST00000297661 MORC2Q9Y6X9 1032 aaPredicted RBP18.38■□□□□ 0.53
UBAP1-201ENST00000297661 UTYO14607 1347 aa18.37■□□□□ 0.53
UBAP1-201ENST00000297661 KDM6AO15550 1401 aaPredicted RBP18.37■□□□□ 0.53
UBAP1-201ENST00000297661 BLOC1S2Q6QNY1 142 aa18.37■□□□□ 0.53
UBAP1-201ENST00000297661 KCNB2Q92953 911 aa18.37■□□□□ 0.53
UBAP1-201ENST00000297661 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
UBAP1-201ENST00000297661 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
UBAP1-201ENST00000297661 DBNLQ9UJU6 430 aaKnown RBP18.37■□□□□ 0.53
UBAP1-201ENST00000297661 ATP6V1DQ9Y5K8 247 aa18.37■□□□□ 0.53
UBAP1-201ENST00000297661 CAMK4Q16566 473 aa18.37■□□□□ 0.53
UBAP1-201ENST00000297661 HDAC5Q9UQL6 1122 aa18.37■□□□□ 0.53
UBAP1-201ENST00000297661 PHKG2P15735 406 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 IRX5P78411 483 aaPredicted RBP18.36■□□□□ 0.53
UBAP1-201ENST00000297661 TERF2Q15554 542 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 ANKRD13DQ6ZTN6 518 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
UBAP1-201ENST00000297661 NWD2Q9ULI1 1742 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 RXRBP28702 533 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 METTL22Q9BUU2 404 aaPredicted RBP18.36■□□□□ 0.53
UBAP1-201ENST00000297661 LRRC2Q9BYS8 371 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 CCDC66A2RUB6 948 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 TNNT1P13805 278 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 LRMPQ12912 555 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
UBAP1-201ENST00000297661 IPO4Q8TEX9 1081 aaKnown RBP18.36■□□□□ 0.53
UBAP1-201ENST00000297661 MEGF6O75095 1541 aa18.35■□□□□ 0.53
UBAP1-201ENST00000297661 COL15A1P39059 1388 aa18.35■□□□□ 0.53
UBAP1-201ENST00000297661 TOB2Q14106 344 aaPredicted RBP18.35■□□□□ 0.53
UBAP1-201ENST00000297661 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
UBAP1-201ENST00000297661 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
UBAP1-201ENST00000297661 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
UBAP1-201ENST00000297661 CCDC186Q7Z3E2 898 aa18.35■□□□□ 0.53
UBAP1-201ENST00000297661 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
UBAP1-201ENST00000297661 CCDC112Q8NEF3 446 aa18.35■□□□□ 0.53
UBAP1-201ENST00000297661 DBNDD2Q9BQY9 259 aa18.35■□□□□ 0.53
UBAP1-201ENST00000297661 ATRNO75882 1429 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 GLI3P10071 1580 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 JAK2O60674 1132 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 CCDC192P0DO97 292 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 IL2RBP14784 551 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 FOSBP53539 338 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 TTC5Q8N0Z6 440 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 HIP1O00291 1037 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 RPS6KB1P23443 525 aa18.34■□□□□ 0.53
UBAP1-201ENST00000297661 PTPN12Q05209 780 aaKnown RBP18.34■□□□□ 0.53
UBAP1-201ENST00000297661 TAF5LO75529 589 aa18.33■□□□□ 0.53
UBAP1-201ENST00000297661 LIG1P18858 919 aa18.33■□□□□ 0.53
UBAP1-201ENST00000297661 PSMA5P28066 241 aa18.33■□□□□ 0.53
UBAP1-201ENST00000297661 DDX11Q96FC9 970 aa18.33■□□□□ 0.53
UBAP1-201ENST00000297661 C5P01031 1676 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 A0A087WZG4 1122 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 CYP27B1O15528 508 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 RBM6P78332 1123 aaKnown RBP18.33■□□□□ 0.52
UBAP1-201ENST00000297661 TNNI3KQ59H18 835 aa18.33■□□□□ 0.52
UBAP1-201ENST00000297661 KRT222Q8N1A0 295 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms