RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 RGS12O14924 1447 aa17.37■□□□□ 0.37
SPIDR-201ENST00000297423 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
SPIDR-201ENST00000297423 CCDC171Q6TFL3 1326 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 KIAA0232Q92628 1395 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 SGSM2O43147 1006 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 JAK2O60674 1132 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 IRX3P78415 501 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-201ENST00000297423 AACSQ86V21 672 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 GPATCH11Q8N954 259 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 ERBB3P21860 1342 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 CCT2P78371 535 aaKnown RBP17.36■□□□□ 0.37
SPIDR-201ENST00000297423 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 HDGFL1Q5TGJ6 251 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 FTOQ9C0B1 505 aaKnown RBP eCLIP17.36■□□□□ 0.37
SPIDR-201ENST00000297423 PTPRCP08575 1304 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
SPIDR-201ENST00000297423 RBM8AQ9Y5S9 174 aaKnown RBP17.36■□□□□ 0.37
SPIDR-201ENST00000297423 RPAP1Q9BWH6 1393 aaPredicted RBP17.35■□□□□ 0.37
SPIDR-201ENST00000297423 MORC2Q9Y6X9 1032 aaPredicted RBP17.35■□□□□ 0.37
SPIDR-201ENST00000297423 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
SPIDR-201ENST00000297423 C11orf57Q6ZUT1 292 aaPredicted RBP17.35■□□□□ 0.37
SPIDR-201ENST00000297423 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
SPIDR-201ENST00000297423 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
SPIDR-201ENST00000297423 ANKRD65E5RJM6 399 aa17.35■□□□□ 0.37
SPIDR-201ENST00000297423 BRF1Q92994 677 aa17.35■□□□□ 0.37
SPIDR-201ENST00000297423 SH2B1Q9NRF2 756 aaPredicted RBP17.34■□□□□ 0.37
SPIDR-201ENST00000297423 TPCN1Q9ULQ1 816 aa17.34■□□□□ 0.37
SPIDR-201ENST00000297423 PHACTR2O75167 634 aa17.34■□□□□ 0.37
SPIDR-201ENST00000297423 SERPINC1P01008 464 aa17.34■□□□□ 0.37
SPIDR-201ENST00000297423 LMOD1P29536 600 aaPredicted RBP17.34■□□□□ 0.37
SPIDR-201ENST00000297423 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
SPIDR-201ENST00000297423 RNF20Q5VTR2 975 aa17.34■□□□□ 0.37
SPIDR-201ENST00000297423 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
SPIDR-201ENST00000297423 MCM6Q14566 821 aa17.34■□□□□ 0.37
SPIDR-201ENST00000297423 CARD6Q9BX69 1037 aa17.34■□□□□ 0.37
SPIDR-201ENST00000297423 PSMA5P28066 241 aa17.33■□□□□ 0.37
SPIDR-201ENST00000297423 HYPKQ9NX55 129 aa17.33■□□□□ 0.37
SPIDR-201ENST00000297423 IFNKQ9P0W0 207 aa17.33■□□□□ 0.37
SPIDR-201ENST00000297423 TCHHQ07283 1943 aa17.33■□□□□ 0.37
SPIDR-201ENST00000297423 RAB11FIP4Q86YS3 637 aa17.33■□□□□ 0.36
SPIDR-201ENST00000297423 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
SPIDR-201ENST00000297423 GOLGA8FQ08AF8 430 aa17.33■□□□□ 0.36
SPIDR-201ENST00000297423 GOLGA8DPQ0D2H9 430 aa17.33■□□□□ 0.36
SPIDR-201ENST00000297423 FAM227BQ96M60 508 aa17.33■□□□□ 0.36
SPIDR-201ENST00000297423 CRB1P82279 1406 aa17.33■□□□□ 0.36
SPIDR-201ENST00000297423 KIF1BPQ96EK5 621 aa17.32■□□□□ 0.36
SPIDR-201ENST00000297423 NFAT5O94916 1531 aa17.32■□□□□ 0.36
SPIDR-201ENST00000297423 CLCN6P51797 869 aa17.32■□□□□ 0.36
SPIDR-201ENST00000297423 PHAXQ9H814 394 aaKnown RBP17.32■□□□□ 0.36
SPIDR-201ENST00000297423 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
SPIDR-201ENST00000297423 NAT10Q9H0A0 1025 aaKnown RBP17.32■□□□□ 0.36
SPIDR-201ENST00000297423 CLSTN2Q9H4D0 955 aa17.32■□□□□ 0.36
SPIDR-201ENST00000297423 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
SPIDR-201ENST00000297423 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
SPIDR-201ENST00000297423 LRRN4CLQ8ND94 238 aa17.31■□□□□ 0.36
SPIDR-201ENST00000297423 STX1AQ16623 288 aa17.31■□□□□ 0.36
SPIDR-201ENST00000297423 LEKR1Q6ZMV7 388 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 CWC15Q9P013 229 aaKnown RBP17.3■□□□□ 0.36
SPIDR-201ENST00000297423 TRIM66O15016 1216 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 GOLGA6L1Q8N7Z2 621 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 FUCA2Q9BTY2 467 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 ANO10Q9NW15 660 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 TMEM87AQ8NBN3 555 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 AK7Q96M32 723 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 NDUFB9Q9Y6M9 179 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 GLRX3O76003 335 aaKnown RBP17.3■□□□□ 0.36
SPIDR-201ENST00000297423 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
SPIDR-201ENST00000297423 IBSPP21815 317 aaPredicted RBP17.3■□□□□ 0.36
SPIDR-201ENST00000297423 OAS2P29728 719 aaKnown RBP17.3■□□□□ 0.36
SPIDR-201ENST00000297423 RAD51AP2Q09MP3 1159 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 RASSF4Q9H2L5 321 aa17.3■□□□□ 0.36
SPIDR-201ENST00000297423 STK38Q15208 465 aa17.29■□□□□ 0.36
SPIDR-201ENST00000297423 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
SPIDR-201ENST00000297423 A0A1B0GVL5 298 aa17.29■□□□□ 0.36
SPIDR-201ENST00000297423 GTF2A1P52655 376 aaPredicted RBP17.29■□□□□ 0.36
SPIDR-201ENST00000297423 GNG11P61952 73 aa17.29■□□□□ 0.36
SPIDR-201ENST00000297423 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
SPIDR-201ENST00000297423 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
SPIDR-201ENST00000297423 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
SPIDR-201ENST00000297423 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
SPIDR-201ENST00000297423 UTP14AQ9BVJ6 771 aaKnown RBP17.29■□□□□ 0.36
SPIDR-201ENST00000297423 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
SPIDR-201ENST00000297423 LTN1O94822 1766 aa17.28■□□□□ 0.36
SPIDR-201ENST00000297423 ST5P78524 1137 aa17.28■□□□□ 0.36
SPIDR-201ENST00000297423 EVCP57679 992 aa17.28■□□□□ 0.36
SPIDR-201ENST00000297423 CHST3Q7LGC8 479 aa17.28■□□□□ 0.36
SPIDR-201ENST00000297423 PNMA6AP0CW24 399 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-201ENST00000297423 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
SPIDR-201ENST00000297423 SLIT3O75094 1523 aa17.27■□□□□ 0.36
SPIDR-201ENST00000297423 CAPN2P17655 700 aa17.27■□□□□ 0.36
SPIDR-201ENST00000297423 NMIQ13287 307 aaPredicted RBP17.27■□□□□ 0.36
SPIDR-201ENST00000297423 ZSCAN26Q16670 478 aa17.27■□□□□ 0.36
SPIDR-201ENST00000297423 NEMFO60524 1076 aa17.27■□□□□ 0.36
SPIDR-201ENST00000297423 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms