RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ANKS4BQ8N8V4 417 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 TUBB2BQ9BVA1 445 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 PSMA7O14818 248 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 VAMP4O75379 141 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 GTF3C6Q969F1 213 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 STAMBPO95630 424 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 STMN4Q9H169 189 aaPredicted RBP12.57□□□□□ -0.4
PBRM1-201ENST00000296302 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 INSRP06213 1382 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 CCDC172P0C7W6 258 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 AFMP43652 599 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 ATP2C2O75185 946 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 U2AF2P26368 475 aaKnown RBP eCLIP12.57□□□□□ -0.4
PBRM1-201ENST00000296302 FAM76AQ8TAV0 307 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
PBRM1-201ENST00000296302 NESP48681 1621 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 MARCKSP29966 332 aaPredicted RBP12.56□□□□□ -0.4
PBRM1-201ENST00000296302 HSP90AA4PQ58FG1 418 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 TCERG1LQ5VWI1 586 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 CREB3L3Q68CJ9 461 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
PBRM1-201ENST00000296302 KRT23Q9C075 422 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 PPP2R3AQ06190 1150 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
PBRM1-201ENST00000296302 ZNF569Q5MCW4 686 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 RAB11FIP4Q86YS3 637 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 MYL5Q02045 173 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 PAF1Q8N7H5 531 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 CNNM2Q9H8M5 875 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 WTAPQ15007 396 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
PBRM1-201ENST00000296302 UBE3BQ7Z3V4 1068 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 CNGA4Q8IV77 575 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 FBF1Q8TES7 1133 aa12.56□□□□□ -0.4
PBRM1-201ENST00000296302 CWC25Q9NXE8 425 aaPredicted RBP12.56□□□□□ -0.4
PBRM1-201ENST00000296302 PUF60Q9UHX1 559 aaKnown RBP12.56□□□□□ -0.4
PBRM1-201ENST00000296302 ZNF500O60304 480 aaPredicted RBP12.55□□□□□ -0.4
PBRM1-201ENST00000296302 VAV2P52735 878 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 KRBA2Q6ZNG9 492 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 STXBP4Q6ZWJ1 553 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
PBRM1-201ENST00000296302 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
PBRM1-201ENST00000296302 BAG1Q99933 345 aaPredicted RBP12.55□□□□□ -0.4
PBRM1-201ENST00000296302 LZTFL1Q9NQ48 299 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 LMBRD1Q9NUN5 540 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 STAT6P42226 847 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 ZSCAN29Q8IWY8 852 aaPredicted RBP12.55□□□□□ -0.4
PBRM1-201ENST00000296302 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
PBRM1-201ENST00000296302 PHACTR2O75167 634 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
PBRM1-201ENST00000296302 SPAG5Q96R06 1193 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 PPP1R9BQ96SB3 815 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 PLB1Q6P1J6 1458 aa12.55□□□□□ -0.4
PBRM1-201ENST00000296302 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
PBRM1-201ENST00000296302 RHOXF2BP0C7M4 288 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 PRPHP41219 470 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 ZNF75DP51815 510 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 TESK2Q96S53 571 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 RHOXF2Q9BQY4 288 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 ZBTB7BO15156 539 aaPredicted RBP12.54□□□□□ -0.4
PBRM1-201ENST00000296302 RTN1Q16799 776 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
PBRM1-201ENST00000296302 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 A6NNZ2 444 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 KIF4AO95239 1232 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
PBRM1-201ENST00000296302 TUBB8Q3ZCM7 444 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 CEP57Q86XR8 500 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 TTC14Q96N46 770 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 IMPACTQ9P2X3 320 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 TRIM75PA6NK02 468 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 PDE4BQ07343 736 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
PBRM1-201ENST00000296302 GUCA1BQ9UMX6 200 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 ZMYM4Q5VZL5 1548 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 ZMYM3Q14202 1370 aa12.54□□□□□ -0.4
PBRM1-201ENST00000296302 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
PBRM1-201ENST00000296302 LMBR1Q8WVP7 490 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 DRC1Q96MC2 740 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
PBRM1-201ENST00000296302 CCDC6Q16204 474 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 GBP6Q6ZN66 633 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms