RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
RFC4-201ENST00000296273 RPS8P62241 208 aaKnown RBP13.69□□□□□ -0.22
RFC4-201ENST00000296273 FAM155AB1AL88 458 aaPredicted RBP13.68□□□□□ -0.22
RFC4-201ENST00000296273 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
RFC4-201ENST00000296273 GPSM2P81274 684 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 KRT24Q2M2I5 525 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 KIF4BQ2VIQ3 1234 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 SULF1Q8IWU6 871 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 TBC1D16Q8TBP0 767 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 ZC3H12CQ9C0D7 883 aaKnown RBP13.68□□□□□ -0.22
RFC4-201ENST00000296273 PODXL2Q9NZ53 605 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
RFC4-201ENST00000296273 TAF1P21675 1872 aa13.68□□□□□ -0.22
RFC4-201ENST00000296273 RTL9Q8NET4 1388 aa13.67□□□□□ -0.22
RFC4-201ENST00000296273 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
RFC4-201ENST00000296273 G3V3G9 751 aa13.67□□□□□ -0.22
RFC4-201ENST00000296273 VIL1P09327 827 aaKnown RBP13.67□□□□□ -0.22
RFC4-201ENST00000296273 ZNF157P51786 506 aaPredicted RBP13.67□□□□□ -0.22
RFC4-201ENST00000296273 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
RFC4-201ENST00000296273 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
RFC4-201ENST00000296273 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
RFC4-201ENST00000296273 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
RFC4-201ENST00000296273 RUNDC1Q96C34 613 aa13.67□□□□□ -0.22
RFC4-201ENST00000296273 ZNF609O15014 1411 aa13.66□□□□□ -0.22
RFC4-201ENST00000296273 ADM5C9JUS6 153 aa13.66□□□□□ -0.22
RFC4-201ENST00000296273 EGFRP00533 1210 aa13.66□□□□□ -0.22
RFC4-201ENST00000296273 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
RFC4-201ENST00000296273 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
RFC4-201ENST00000296273 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
RFC4-201ENST00000296273 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
RFC4-201ENST00000296273 CASP8AP2Q9UKL3 1982 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 MYBBP1AQ9BQG0 1328 aaKnown RBP13.65□□□□□ -0.22
RFC4-201ENST00000296273 SLC10A3P09131 477 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
RFC4-201ENST00000296273 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 RIC3Q7Z5B4 369 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 AGBL3Q8NEM8 1001 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 GGA3Q9NZ52 723 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
RFC4-201ENST00000296273 FKBP1BP68106 108 aa13.64□□□□□ -0.23
RFC4-201ENST00000296273 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
RFC4-201ENST00000296273 WDR43Q15061 677 aaKnown RBP eCLIP13.64□□□□□ -0.23
RFC4-201ENST00000296273 CCDC152Q4G0S7 254 aa13.64□□□□□ -0.23
RFC4-201ENST00000296273 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
RFC4-201ENST00000296273 RNF186Q9NXI6 227 aa13.64□□□□□ -0.23
RFC4-201ENST00000296273 GGA1Q9UJY5 639 aa13.64□□□□□ -0.23
RFC4-201ENST00000296273 TRPA1O75762 1119 aa13.63□□□□□ -0.23
RFC4-201ENST00000296273 UFL1O94874 794 aa13.63□□□□□ -0.23
RFC4-201ENST00000296273 ZNF280AP59817 542 aaPredicted RBP13.63□□□□□ -0.23
RFC4-201ENST00000296273 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
RFC4-201ENST00000296273 CCDC191Q8NCU4 936 aa13.63□□□□□ -0.23
RFC4-201ENST00000296273 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
RFC4-201ENST00000296273 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
RFC4-201ENST00000296273 PDE8AO60658 829 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 CDCA5Q96FF9 252 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 CHMP4AQ9BY43 222 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 XDHP47989 1333 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 COL4A1P02462 1669 aa13.62□□□□□ -0.23
RFC4-201ENST00000296273 PCCAP05165 728 aaPredicted RBP13.61□□□□□ -0.23
RFC4-201ENST00000296273 SCARF1Q14162 830 aa13.61□□□□□ -0.23
RFC4-201ENST00000296273 ANGEL2Q5VTE6 544 aaKnown RBP13.61□□□□□ -0.23
RFC4-201ENST00000296273 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
RFC4-201ENST00000296273 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
RFC4-201ENST00000296273 CALD1Q05682 793 aaKnown RBP13.6□□□□□ -0.23
RFC4-201ENST00000296273 CTU1Q7Z7A3 348 aaKnown RBP13.6□□□□□ -0.23
RFC4-201ENST00000296273 RASAL3Q86YV0 1011 aa13.6□□□□□ -0.23
RFC4-201ENST00000296273 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
RFC4-201ENST00000296273 MBIPQ9NS73 344 aa13.6□□□□□ -0.23
RFC4-201ENST00000296273 AKAP11Q9UKA4 1901 aa13.6□□□□□ -0.23
RFC4-201ENST00000296273 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
RFC4-201ENST00000296273 SCN9AQ15858 1988 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 PAPPA2Q9BXP8 1791 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 USP17L3A6NCW0 530 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 USP17L4A6NCW7 530 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 DDX58O95786 925 aaKnown RBP13.59□□□□□ -0.23
RFC4-201ENST00000296273 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 USP17L1Q7RTZ2 530 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 ANKRD18AQ8IVF6 992 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 GMLQ99445 158 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 MYD88Q99836 296 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
RFC4-201ENST00000296273 CWC25Q9NXE8 425 aaPredicted RBP13.59□□□□□ -0.23
RFC4-201ENST00000296273 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
RFC4-201ENST00000296273 PSME4Q14997 1843 aa13.58□□□□□ -0.23
RFC4-201ENST00000296273 ZNF853P0CG23 659 aa13.58□□□□□ -0.23
RFC4-201ENST00000296273 GNAI1P63096 354 aa13.58□□□□□ -0.23
RFC4-201ENST00000296273 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.23
RFC4-201ENST00000296273 CDC5LQ99459 802 aaKnown RBP13.58□□□□□ -0.23
RFC4-201ENST00000296273 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.23
RFC4-201ENST00000296273 IFT57Q9NWB7 429 aa13.58□□□□□ -0.23
RFC4-201ENST00000296273 ASTN2O75129 1339 aaPredicted RBP13.58□□□□□ -0.24
RFC4-201ENST00000296273 MMP14P50281 582 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms