RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
PSMB4-201ENST00000290541 NOB1Q9ULX3 412 aaKnown RBP16.96■□□□□ 0.31
PSMB4-201ENST00000290541 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
PSMB4-201ENST00000290541 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
PSMB4-201ENST00000290541 GPTP24298 496 aa16.95■□□□□ 0.3
PSMB4-201ENST00000290541 CLEC4GQ6UXB4 293 aa16.95■□□□□ 0.3
PSMB4-201ENST00000290541 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
PSMB4-201ENST00000290541 CDC37L1Q7L3B6 337 aa16.95■□□□□ 0.3
PSMB4-201ENST00000290541 TNNQ9UQP3 1299 aa16.95■□□□□ 0.3
PSMB4-201ENST00000290541 ATP5J2-PTCD1G3V325 749 aa16.94■□□□□ 0.3
PSMB4-201ENST00000290541 HIRAP54198 1017 aaPredicted RBP16.94■□□□□ 0.3
PSMB4-201ENST00000290541 TCIRG1Q13488 830 aa16.94■□□□□ 0.3
PSMB4-201ENST00000290541 DLK2Q6UY11 383 aa16.94■□□□□ 0.3
PSMB4-201ENST00000290541 ZNF34Q8IZ26 560 aa16.94■□□□□ 0.3
PSMB4-201ENST00000290541 ZC3H15Q8WU90 426 aaKnown RBP16.94■□□□□ 0.3
PSMB4-201ENST00000290541 NIP7Q9Y221 180 aaKnown RBP eCLIP16.94■□□□□ 0.3
PSMB4-201ENST00000290541 SPTBN5Q9NRC6 3674 aaKnown RBP16.94■□□□□ 0.3
PSMB4-201ENST00000290541 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
PSMB4-201ENST00000290541 DDX58O95786 925 aaKnown RBP16.93■□□□□ 0.3
PSMB4-201ENST00000290541 ZNF157P51786 506 aaPredicted RBP16.93■□□□□ 0.3
PSMB4-201ENST00000290541 MYD88Q99836 296 aa16.93■□□□□ 0.3
PSMB4-201ENST00000290541 METTL22Q9BUU2 404 aaPredicted RBP16.93■□□□□ 0.3
PSMB4-201ENST00000290541 RCAN3Q9UKA8 241 aa16.93■□□□□ 0.3
PSMB4-201ENST00000290541 ZNF652Q9Y2D9 606 aa16.93■□□□□ 0.3
PSMB4-201ENST00000290541 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
PSMB4-201ENST00000290541 RGL2O15211 777 aa16.92■□□□□ 0.3
PSMB4-201ENST00000290541 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
PSMB4-201ENST00000290541 SETDB2Q96T68 719 aa16.92■□□□□ 0.3
PSMB4-201ENST00000290541 ISCA1Q9BUE6 129 aa16.92■□□□□ 0.3
PSMB4-201ENST00000290541 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
PSMB4-201ENST00000290541 POLR2AP24928 1970 aaKnown RBP16.91■□□□□ 0.3
PSMB4-201ENST00000290541 IGKV5-2P06315 115 aa16.91■□□□□ 0.3
PSMB4-201ENST00000290541 SUSD4Q5VX71 490 aa16.91■□□□□ 0.3
PSMB4-201ENST00000290541 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
PSMB4-201ENST00000290541 COL25A1Q9BXS0 654 aaPredicted RBP16.91■□□□□ 0.3
PSMB4-201ENST00000290541 GBA2Q9HCG7 927 aaPredicted RBP16.91■□□□□ 0.3
PSMB4-201ENST00000290541 PTPRCP08575 1304 aa16.91■□□□□ 0.3
PSMB4-201ENST00000290541 NPHP1O15259 732 aa16.9■□□□□ 0.3
PSMB4-201ENST00000290541 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
PSMB4-201ENST00000290541 NLRP10Q86W26 655 aa16.9■□□□□ 0.3
PSMB4-201ENST00000290541 TRPM4Q8TD43 1214 aa16.9■□□□□ 0.3
PSMB4-201ENST00000290541 H0YGN5 161 aa16.89■□□□□ 0.29
PSMB4-201ENST00000290541 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
PSMB4-201ENST00000290541 HSP90AB3PQ58FF7 597 aa16.89■□□□□ 0.29
PSMB4-201ENST00000290541 BEND3Q5T5X7 828 aa16.89■□□□□ 0.29
PSMB4-201ENST00000290541 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
PSMB4-201ENST00000290541 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
PSMB4-201ENST00000290541 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
PSMB4-201ENST00000290541 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
PSMB4-201ENST00000290541 REM2Q8IYK8 340 aaPredicted RBP16.89■□□□□ 0.29
PSMB4-201ENST00000290541 PLIN1O60240 522 aa16.88■□□□□ 0.29
PSMB4-201ENST00000290541 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
PSMB4-201ENST00000290541 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
PSMB4-201ENST00000290541 LARGE2Q8N3Y3 721 aa16.88■□□□□ 0.29
PSMB4-201ENST00000290541 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
PSMB4-201ENST00000290541 RBM27Q9P2N5 1060 aaKnown RBP16.88■□□□□ 0.29
PSMB4-201ENST00000290541 KIF16BQ96L93 1317 aa16.88■□□□□ 0.29
PSMB4-201ENST00000290541 GPR25O00155 361 aa16.87■□□□□ 0.29
PSMB4-201ENST00000290541 NTSR2O95665 410 aa16.87■□□□□ 0.29
PSMB4-201ENST00000290541 TRIM27P14373 513 aa16.87■□□□□ 0.29
PSMB4-201ENST00000290541 GMPSP49915 693 aaPredicted RBP16.87■□□□□ 0.29
PSMB4-201ENST00000290541 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
PSMB4-201ENST00000290541 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
PSMB4-201ENST00000290541 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
PSMB4-201ENST00000290541 C2orf69Q8N8R5 385 aa16.87■□□□□ 0.29
PSMB4-201ENST00000290541 CDHR2Q9BYE9 1310 aa16.87■□□□□ 0.29
PSMB4-201ENST00000290541 NEURL1BA8MQ27 555 aa16.86■□□□□ 0.29
PSMB4-201ENST00000290541 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
PSMB4-201ENST00000290541 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
PSMB4-201ENST00000290541 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
PSMB4-201ENST00000290541 RASAL3Q86YV0 1011 aa16.86■□□□□ 0.29
PSMB4-201ENST00000290541 ARHGAP45Q92619 1136 aa16.86■□□□□ 0.29
PSMB4-201ENST00000290541 CLUAP1Q96AJ1 413 aa16.86■□□□□ 0.29
PSMB4-201ENST00000290541 API5Q9BZZ5 524 aaKnown RBP16.86■□□□□ 0.29
PSMB4-201ENST00000290541 NEXNQ0ZGT2 675 aa16.85■□□□□ 0.29
PSMB4-201ENST00000290541 RTL5Q5HYW3 569 aaPredicted RBP16.85■□□□□ 0.29
PSMB4-201ENST00000290541 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
PSMB4-201ENST00000290541 NIM1KQ8IY84 436 aa16.85■□□□□ 0.29
PSMB4-201ENST00000290541 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
PSMB4-201ENST00000290541 UTP14AQ9BVJ6 771 aaKnown RBP16.85■□□□□ 0.29
PSMB4-201ENST00000290541 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
PSMB4-201ENST00000290541 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
PSMB4-201ENST00000290541 RLBP1P12271 317 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 CXCL9Q07325 125 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
PSMB4-201ENST00000290541 ABCC4O15439 1325 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
PSMB4-201ENST00000290541 GCKRQ14397 625 aa16.83■□□□□ 0.28
PSMB4-201ENST00000290541 CC2D2BQ6DHV5 1058 aa16.83■□□□□ 0.28
PSMB4-201ENST00000290541 TPTE2Q6XPS3 522 aa16.83■□□□□ 0.28
PSMB4-201ENST00000290541 PRO3102Q9H379 93 aa16.83■□□□□ 0.28
PSMB4-201ENST00000290541 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
PSMB4-201ENST00000290541 C20orf194Q5TEA3 1177 aa16.82■□□□□ 0.28
PSMB4-201ENST00000290541 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
PSMB4-201ENST00000290541 PANK1Q8TE04 598 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms