RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 VEGFBP49765 207 aa12.23□□□□□ -0.45
HMHB1-201ENST00000289448 CTSWP56202 376 aa12.23□□□□□ -0.45
HMHB1-201ENST00000289448 COL13A1Q5TAT6 717 aaPredicted RBP12.23□□□□□ -0.45
HMHB1-201ENST00000289448 TTLL11Q8NHH1 800 aa12.23□□□□□ -0.45
HMHB1-201ENST00000289448 TRPM4Q8TD43 1214 aa12.23□□□□□ -0.45
HMHB1-201ENST00000289448 ECE2O60344 883 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 CASP7P55210 303 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 NEXNQ0ZGT2 675 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
HMHB1-201ENST00000289448 GCKRQ14397 625 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 CST9Q5W186 159 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 UBE3BQ7Z3V4 1068 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 GREM2Q9H772 168 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
HMHB1-201ENST00000289448 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
HMHB1-201ENST00000289448 UFL1O94874 794 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 EGFRP00533 1210 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 MICALL2Q8IY33 904 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 DNAAF4Q8WXU2 420 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 EYA3Q99504 573 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 GGA1Q9UJY5 639 aa12.21□□□□□ -0.45
HMHB1-201ENST00000289448 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
HMHB1-201ENST00000289448 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
HMHB1-201ENST00000289448 F6X3S4 739 aa12.2□□□□□ -0.46
HMHB1-201ENST00000289448 SAMD7Q7Z3H4 446 aa12.2□□□□□ -0.46
HMHB1-201ENST00000289448 DPF2Q92785 391 aa12.2□□□□□ -0.46
HMHB1-201ENST00000289448 GLIS2Q9BZE0 524 aaPredicted RBP12.2□□□□□ -0.46
HMHB1-201ENST00000289448 ZC3H12CQ9C0D7 883 aaKnown RBP12.2□□□□□ -0.46
HMHB1-201ENST00000289448 MINPP1Q9UNW1 487 aa12.2□□□□□ -0.46
HMHB1-201ENST00000289448 H7C1D1 291 aa12.19□□□□□ -0.46
HMHB1-201ENST00000289448 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
HMHB1-201ENST00000289448 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
HMHB1-201ENST00000289448 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
HMHB1-201ENST00000289448 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
HMHB1-201ENST00000289448 PLA2G12BQ9BX93 195 aa12.19□□□□□ -0.46
HMHB1-201ENST00000289448 BSDC1Q9NW68 430 aaPredicted RBP12.19□□□□□ -0.46
HMHB1-201ENST00000289448 ABT1Q9ULW3 272 aaKnown RBP12.19□□□□□ -0.46
HMHB1-201ENST00000289448 XDHP47989 1333 aa12.18□□□□□ -0.46
HMHB1-201ENST00000289448 SCN9AQ15858 1988 aa12.18□□□□□ -0.46
HMHB1-201ENST00000289448 CSF1RP07333 972 aa12.18□□□□□ -0.46
HMHB1-201ENST00000289448 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
HMHB1-201ENST00000289448 FAM161AQ3B820 660 aa12.18□□□□□ -0.46
HMHB1-201ENST00000289448 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
HMHB1-201ENST00000289448 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
HMHB1-201ENST00000289448 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
HMHB1-201ENST00000289448 MYH16Q9H6N6 1097 aa12.18□□□□□ -0.46
HMHB1-201ENST00000289448 FOXN1O15353 648 aa12.17□□□□□ -0.46
HMHB1-201ENST00000289448 ITGA6P23229 1130 aa12.17□□□□□ -0.46
HMHB1-201ENST00000289448 ATP2B4P23634 1241 aa12.17□□□□□ -0.46
HMHB1-201ENST00000289448 RPS12P25398 132 aaKnown RBP12.17□□□□□ -0.46
HMHB1-201ENST00000289448 WDR33Q9C0J8 1336 aaKnown RBP12.16□□□□□ -0.46
HMHB1-201ENST00000289448 CELF2O95319 508 aaKnown RBP12.16□□□□□ -0.46
HMHB1-201ENST00000289448 FOXO4P98177 505 aa12.16□□□□□ -0.46
HMHB1-201ENST00000289448 RBM26Q5T8P6 1007 aaKnown RBP12.16□□□□□ -0.46
HMHB1-201ENST00000289448 USP48Q86UV5 1035 aa12.16□□□□□ -0.46
HMHB1-201ENST00000289448 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
HMHB1-201ENST00000289448 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
HMHB1-201ENST00000289448 TLL2Q9Y6L7 1015 aa12.16□□□□□ -0.46
HMHB1-201ENST00000289448 ASTN2O75129 1339 aaPredicted RBP12.15□□□□□ -0.46
HMHB1-201ENST00000289448 G3V3G9 751 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 KLRK1P26718 216 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 CCT4P50991 539 aaKnown RBP12.15□□□□□ -0.46
HMHB1-201ENST00000289448 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
HMHB1-201ENST00000289448 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 SAPCD2Q86UD0 394 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 GMLQ99445 158 aa12.15□□□□□ -0.46
HMHB1-201ENST00000289448 CACNA1FO60840 1977 aa12.14□□□□□ -0.47
HMHB1-201ENST00000289448 MYH3P11055 1940 aa12.14□□□□□ -0.47
HMHB1-201ENST00000289448 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
HMHB1-201ENST00000289448 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
HMHB1-201ENST00000289448 MXD3Q9BW11 206 aa12.14□□□□□ -0.47
HMHB1-201ENST00000289448 ZNF408Q9H9D4 720 aa12.14□□□□□ -0.47
HMHB1-201ENST00000289448 MED23Q9ULK4 1368 aa12.14□□□□□ -0.47
HMHB1-201ENST00000289448 TRPM7Q96QT4 1865 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 SNAP23O00161 211 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 GRM1Q13255 1194 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
HMHB1-201ENST00000289448 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 KRT26Q7Z3Y9 468 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 PODNQ7Z5L7 613 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 TNS4Q8IZW8 715 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 AGBL3Q8NEM8 1001 aa12.13□□□□□ -0.47
HMHB1-201ENST00000289448 ZNF609O15014 1411 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 SPEF2Q9C093 1822 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 GRM8O00222 908 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 AOC2O75106 756 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 CHRNDQ07001 517 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 DACT2Q5SW24 774 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms