RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 DDX60Q8IY21 1712 aaKnown RBP14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 ECE2O60344 883 aa14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 ZNF157P51786 506 aaPredicted RBP14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 GPSM2P81274 684 aa14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 KIF23Q02241 960 aaPredicted RBP14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 C2orf69Q8N8R5 385 aa14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 TNRC18O15417 2968 aaPredicted RBP14.05□□□□□ -0.16
NSMCE2-201ENST00000287437 TRPA1O75762 1119 aa14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 RPS12P25398 132 aaKnown RBP14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 SF3B3Q15393 1217 aaKnown RBP14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 KIF4BQ2VIQ3 1234 aa14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 RTL5Q5HYW3 569 aaPredicted RBP14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 CCDC102AQ96A19 550 aa14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 SAGE1Q9NXZ1 904 aa14.04□□□□□ -0.16
NSMCE2-201ENST00000287437 SOX10P56693 466 aa14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 NEUROD2Q15784 382 aa14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 PLBD2Q8NHP8 589 aa14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 EYA3Q99504 573 aa14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 ISCA1Q9BUE6 129 aa14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 RNF186Q9NXI6 227 aa14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 ASTN2O75129 1339 aaPredicted RBP14.03□□□□□ -0.16
NSMCE2-201ENST00000287437 SLC10A3P09131 477 aa14.02□□□□□ -0.17
NSMCE2-201ENST00000287437 HDGFL1Q5TGJ6 251 aa14.02□□□□□ -0.17
NSMCE2-201ENST00000287437 ANKRD13DQ6ZTN6 518 aa14.02□□□□□ -0.17
NSMCE2-201ENST00000287437 SULF1Q8IWU6 871 aa14.02□□□□□ -0.17
NSMCE2-201ENST00000287437 TBC1D16Q8TBP0 767 aa14.02□□□□□ -0.17
NSMCE2-201ENST00000287437 CHL1O00533 1208 aa14.01□□□□□ -0.17
NSMCE2-201ENST00000287437 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
NSMCE2-201ENST00000287437 CDCA5Q96FF9 252 aa14.01□□□□□ -0.17
NSMCE2-201ENST00000287437 CSRNP1Q96S65 589 aa14.01□□□□□ -0.17
NSMCE2-201ENST00000287437 IRS4O14654 1257 aaPredicted RBP14□□□□□ -0.17
NSMCE2-201ENST00000287437 VIL1P09327 827 aaKnown RBP14□□□□□ -0.17
NSMCE2-201ENST00000287437 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
NSMCE2-201ENST00000287437 ZC3H12CQ9C0D7 883 aaKnown RBP14□□□□□ -0.17
NSMCE2-201ENST00000287437 UFL1O94874 794 aa13.99□□□□□ -0.17
NSMCE2-201ENST00000287437 DSG3P32926 999 aa13.99□□□□□ -0.17
NSMCE2-201ENST00000287437 ANGEL2Q5VTE6 544 aaKnown RBP13.99□□□□□ -0.17
NSMCE2-201ENST00000287437 SEC31BQ9NQW1 1179 aa13.99□□□□□ -0.17
NSMCE2-201ENST00000287437 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
NSMCE2-201ENST00000287437 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
NSMCE2-201ENST00000287437 POLR2AP24928 1970 aaKnown RBP13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 G3V3G9 751 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 SCARF1Q14162 830 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 RASAL3Q86YV0 1011 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 ANKIB1Q9P2G1 1089 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
NSMCE2-201ENST00000287437 HOXB7P09629 217 aa13.97□□□□□ -0.17
NSMCE2-201ENST00000287437 ZNF280AP59817 542 aaPredicted RBP13.97□□□□□ -0.17
NSMCE2-201ENST00000287437 TRIM28Q13263 835 aaKnown RBP13.97□□□□□ -0.17
NSMCE2-201ENST00000287437 CTU1Q7Z7A3 348 aaKnown RBP13.97□□□□□ -0.17
NSMCE2-201ENST00000287437 HYPKQ9NX55 129 aa13.97□□□□□ -0.17
NSMCE2-201ENST00000287437 GGA1Q9UJY5 639 aa13.97□□□□□ -0.17
NSMCE2-201ENST00000287437 SCAF8Q9UPN6 1271 aaKnown RBP13.97□□□□□ -0.17
NSMCE2-201ENST00000287437 RSBN1LQ6PCB5 846 aaPredicted RBP13.96□□□□□ -0.17
NSMCE2-201ENST00000287437 MOB2Q70IA6 237 aa13.96□□□□□ -0.17
NSMCE2-201ENST00000287437 ZBTB38Q8NAP3 1195 aaPredicted RBP13.96□□□□□ -0.17
NSMCE2-201ENST00000287437 AGBL3Q8NEM8 1001 aa13.96□□□□□ -0.17
NSMCE2-201ENST00000287437 ZNF609O15014 1411 aa13.96□□□□□ -0.18
NSMCE2-201ENST00000287437 DUSP27Q5VZP5 1158 aa13.95□□□□□ -0.18
NSMCE2-201ENST00000287437 RIC3Q7Z5B4 369 aa13.95□□□□□ -0.18
NSMCE2-201ENST00000287437 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
NSMCE2-201ENST00000287437 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
NSMCE2-201ENST00000287437 PAPPA2Q9BXP8 1791 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 FKBP1BP68106 108 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 GOLGA2Q08379 1002 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 RALBP1Q15311 655 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 CCDC152Q4G0S7 254 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 GMLQ99445 158 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 MYD88Q99836 296 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 HPS5Q9UPZ3 1129 aa13.94□□□□□ -0.18
NSMCE2-201ENST00000287437 PRAMEF18Q5VWM3 479 aa13.93□□□□□ -0.18
NSMCE2-201ENST00000287437 RUNDC1Q96C34 613 aa13.93□□□□□ -0.18
NSMCE2-201ENST00000287437 MBIPQ9NS73 344 aa13.93□□□□□ -0.18
NSMCE2-201ENST00000287437 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
NSMCE2-201ENST00000287437 XDHP47989 1333 aa13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 PITPNM2Q9BZ72 1349 aa13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 WTIPA6NIX2 430 aaPredicted RBP13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 UBE2Q2LH0YL09 131 aa13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 TBC1D8O95759 1140 aa13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 PCCAP05165 728 aaPredicted RBP13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 HSP90B1P14625 803 aaKnown RBP13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 PRPF38BQ5VTL8 546 aaKnown RBP13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 ZNF296Q8WUU4 475 aaPredicted RBP13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 HDAC9Q9UKV0 1011 aa13.92□□□□□ -0.18
NSMCE2-201ENST00000287437 USP17L3A6NCW0 530 aa13.91□□□□□ -0.18
NSMCE2-201ENST00000287437 USP17L4A6NCW7 530 aa13.91□□□□□ -0.18
NSMCE2-201ENST00000287437 PDE8AO60658 829 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms