RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ATP5JP18859 108 aa21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 IL6STP40189 918 aaPredicted RBP21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 CCDC57Q2TAC2 916 aa21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 TMEM87AQ8NBN3 555 aa21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 FAM13BQ9NYF5 915 aa21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 SNX14Q9Y5W7 946 aa21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 PTMAP06454 111 aaKnown RBP21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 KIAA2012Q0VF49 1180 aa21.84■■□□□ 1.09
PDLIM3-201ENST00000284767 FAM182BQ5T319 152 aa21.83■■□□□ 1.09
PDLIM3-201ENST00000284767 CPA1P15085 419 aa21.83■■□□□ 1.08
PDLIM3-201ENST00000284767 IL15P40933 162 aaPredicted RBP21.83■■□□□ 1.08
PDLIM3-201ENST00000284767 RUFY2Q8WXA3 655 aa21.83■■□□□ 1.08
PDLIM3-201ENST00000284767 TRMT112Q9UI30 125 aaKnown RBP21.83■■□□□ 1.08
PDLIM3-201ENST00000284767 PALLDQ8WX93 1383 aa21.82■■□□□ 1.08
PDLIM3-201ENST00000284767 DDX46Q7L014 1031 aaKnown RBP21.82■■□□□ 1.08
PDLIM3-201ENST00000284767 EIF5P55010 431 aaKnown RBP21.82■■□□□ 1.08
PDLIM3-201ENST00000284767 CCDC87Q9NVE4 849 aa21.82■■□□□ 1.08
PDLIM3-201ENST00000284767 NUP98P52948 1817 aa21.81■■□□□ 1.08
PDLIM3-201ENST00000284767 SLFNL1Q499Z3 407 aa21.81■■□□□ 1.08
PDLIM3-201ENST00000284767 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
PDLIM3-201ENST00000284767 ZNF589Q86UQ0 364 aaPredicted RBP21.81■■□□□ 1.08
PDLIM3-201ENST00000284767 USP48Q86UV5 1035 aa21.81■■□□□ 1.08
PDLIM3-201ENST00000284767 LARP6Q9BRS8 491 aaKnown RBP21.81■■□□□ 1.08
PDLIM3-201ENST00000284767 GREM2Q9H772 168 aa21.81■■□□□ 1.08
PDLIM3-201ENST00000284767 JCADQ9P266 1359 aa21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 A0A1B0GUL7 405 aa21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 SMIM5Q71RC9 77 aa21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 KLHL34Q8N239 644 aa21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 MYH14Q7Z406 1995 aaKnown RBP21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 IRS4O14654 1257 aaPredicted RBP21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 GADD45BO75293 160 aaPredicted RBP21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 LETM1O95202 739 aaPredicted RBP21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 CSF1RP07333 972 aa21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 TTLL11Q8NHH1 800 aa21.8■■□□□ 1.08
PDLIM3-201ENST00000284767 CCDC171Q6TFL3 1326 aa21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 VPS72Q15906 364 aa21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 ADCK5Q3MIX3 580 aa21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 SEC62Q99442 399 aaKnown RBP21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 IFIT5Q13325 482 aaKnown RBP21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 COL9A3Q14050 684 aaPredicted RBP21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 HSP90AB3PQ58FF7 597 aa21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 TAF7LQ5H9L4 462 aa21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 CCDC183Q5T5S1 534 aa21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 PLA2G12BQ9BX93 195 aa21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 RPAP1Q9BWH6 1393 aaPredicted RBP21.79■■□□□ 1.08
PDLIM3-201ENST00000284767 HAUS7Q99871 368 aa21.78■■□□□ 1.08
PDLIM3-201ENST00000284767 ZNF609O15014 1411 aa21.78■■□□□ 1.08
PDLIM3-201ENST00000284767 ITGA6P23229 1130 aa21.78■■□□□ 1.08
PDLIM3-201ENST00000284767 ADORA1P30542 326 aa21.78■■□□□ 1.08
PDLIM3-201ENST00000284767 TCHHQ07283 1943 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 ERVV-1B6SEH8 477 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 CIAO1O76071 339 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 CCDC129Q6ZRS4 1044 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 ZNF34Q8IZ26 560 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 CEP126Q9P2H0 1117 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 RBM8AQ9Y5S9 174 aaKnown RBP21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 ANKRD36CQ5JPF3 1778 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 GOLIM4O00461 696 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 CTSWP56202 376 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 GDPD2Q9HCC8 539 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 USP21Q9UK80 565 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 TAF6LQ9Y6J9 622 aa21.77■■□□□ 1.08
PDLIM3-201ENST00000284767 CDHR2Q9BYE9 1310 aa21.76■■□□□ 1.07
PDLIM3-201ENST00000284767 SUSD4Q5VX71 490 aa21.76■■□□□ 1.07
PDLIM3-201ENST00000284767 HIP1O00291 1037 aa21.76■■□□□ 1.07
PDLIM3-201ENST00000284767 HCLS1P14317 486 aaPredicted RBP21.76■■□□□ 1.07
PDLIM3-201ENST00000284767 KCNJ4P48050 445 aa21.75■■□□□ 1.07
PDLIM3-201ENST00000284767 NECTIN1Q15223 517 aa21.75■■□□□ 1.07
PDLIM3-201ENST00000284767 CASTP20810 708 aaKnown RBP21.75■■□□□ 1.07
PDLIM3-201ENST00000284767 FNBP4Q8N3X1 1017 aaPredicted RBP21.75■■□□□ 1.07
PDLIM3-201ENST00000284767 GPR108Q9NPR9 543 aa21.75■■□□□ 1.07
PDLIM3-201ENST00000284767 MED23Q9ULK4 1368 aa21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 LDHAL6AQ6ZMR3 332 aa21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 PIBF1Q8WXW3 757 aa21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 MAP4K1Q92918 833 aa21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 SNRKQ9NRH2 765 aa21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 DTNBO60941 627 aa21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 ZSCAN22P10073 491 aaPredicted RBP21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 JAKMIP1Q96N16 626 aaKnown RBP21.74■■□□□ 1.07
PDLIM3-201ENST00000284767 UBE2HP62256 183 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 FOXD4L6Q3SYB3 417 aaPredicted RBP21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 CREB3L3Q68CJ9 461 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 FOXD4L3Q6VB84 417 aaPredicted RBP21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 LINC00116Q8NCU8 138 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 PAG1Q9NWQ8 432 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 AK2P54819 239 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 MYRIPQ8NFW9 859 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 PRIMPOLQ96LW4 560 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 TTC14Q96N46 770 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 ATP6V1DQ9Y5K8 247 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 EP400Q96L91 3159 aa21.73■■□□□ 1.07
PDLIM3-201ENST00000284767 IFIT1P09914 478 aaKnown RBP21.72■■□□□ 1.07
PDLIM3-201ENST00000284767 XAGE2Q96GT9 111 aa21.72■■□□□ 1.07
PDLIM3-201ENST00000284767 RIPOR2Q9Y4F9 1068 aa21.72■■□□□ 1.07
PDLIM3-201ENST00000284767 RIC1Q4ADV7 1423 aa21.71■■□□□ 1.07
PDLIM3-201ENST00000284767 PDE8AO60658 829 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms