RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ZNF771Q7L3S4 317 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-201ENST00000281142 DNAJC25Q9H1X3 360 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 TNMDQ9H2S6 317 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 A0A087WWV3 80 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 USP27XA6NNY8 438 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 EIF2S2P20042 333 aaKnown RBP13.42□□□□□ -0.26
SCLT1-201ENST00000281142 ZNF75DP51815 510 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 VPS53Q5VIR6 699 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 CYP46A1Q9Y6A2 500 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 EPB41L2O43491 1005 aaKnown RBP13.42□□□□□ -0.26
SCLT1-201ENST00000281142 KRT85P78386 507 aa13.42□□□□□ -0.26
SCLT1-201ENST00000281142 KDM3BQ7LBC6 1761 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 STK3Q13188 491 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 FAM227BQ96M60 508 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 RAB11FIP3O75154 756 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 NR1I2O75469 434 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-201ENST00000281142 HDGFL1Q5TGJ6 251 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 SLC52A2Q9HAB3 445 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 PA2G4Q9UQ80 394 aaKnown RBP13.41□□□□□ -0.26
SCLT1-201ENST00000281142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-201ENST00000281142 SBF2Q86WG5 1849 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 PLA2G4DQ86XP0 818 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 OGFRQ9NZT2 677 aa13.41□□□□□ -0.26
SCLT1-201ENST00000281142 TEFQ10587 303 aa13.4□□□□□ -0.26
SCLT1-201ENST00000281142 TPD52L1Q16890 204 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-201ENST00000281142 RBM8AQ9Y5S9 174 aaKnown RBP13.4□□□□□ -0.26
SCLT1-201ENST00000281142 NECTIN1Q15223 517 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
SCLT1-201ENST00000281142 CREB3L3Q68CJ9 461 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 PLCD3Q8N3E9 789 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 PGBD1Q96JS3 809 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 SPATA32Q96LK8 384 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 SH2B1Q9NRF2 756 aaPredicted RBP13.39□□□□□ -0.27
SCLT1-201ENST00000281142 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 ERVV-2B6SEH9 535 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 KCNJ4P48050 445 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 CABP4P57796 275 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 ZSCAN31Q96LW9 406 aaPredicted RBP13.39□□□□□ -0.27
SCLT1-201ENST00000281142 FEZ1Q99689 392 aa13.39□□□□□ -0.27
SCLT1-201ENST00000281142 ZNF165P49910 485 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-201ENST00000281142 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 GOLGA6L4A6NEF3 574 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 KRT27Q7Z3Y8 459 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 DDX41Q9UJV9 622 aaKnown RBP13.38□□□□□ -0.27
SCLT1-201ENST00000281142 CCDC171Q6TFL3 1326 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 PI4KAP2A4QPH2 592 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
SCLT1-201ENST00000281142 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-201ENST00000281142 PI4KAP1Q8N8J0 262 aa13.38□□□□□ -0.27
SCLT1-201ENST00000281142 KCNQ3O43525 872 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 JAK2O60674 1132 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 CEBPZQ03701 1054 aaKnown RBP13.37□□□□□ -0.27
SCLT1-201ENST00000281142 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
SCLT1-201ENST00000281142 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-201ENST00000281142 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 ST7Q9NRC1 585 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 KCNQ2O43526 872 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 SLFN14P0C7P3 912 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 NMIQ13287 307 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-201ENST00000281142 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-201ENST00000281142 KIF18AQ8NI77 898 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 TRMT1Q9NXH9 659 aaKnown RBP13.37□□□□□ -0.27
SCLT1-201ENST00000281142 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
SCLT1-201ENST00000281142 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-201ENST00000281142 SLC27A2O14975 620 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 NPHP1O15259 732 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 FOSBP53539 338 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 SLC39A6Q13433 755 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 KMT5BQ4FZB7 885 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 CEP135Q66GS9 1140 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 PTF1AQ7RTS3 328 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 PIGBQ92521 554 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 BCL9O00512 1426 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
SCLT1-201ENST00000281142 BEND3Q5T5X7 828 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 TMOD3Q9NYL9 352 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 ELP1O95163 1332 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 A0A0D9SFI3 127 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 ERCC4Q92889 916 aaPredicted RBP13.36□□□□□ -0.27
SCLT1-201ENST00000281142 KCNB2Q92953 911 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
SCLT1-201ENST00000281142 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-201ENST00000281142 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms