RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 PDE3AQ14432 1141 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 TWISTNBQ3B726 338 aaPredicted RBP11.37□□□□□ -0.59
PDCD4-201ENST00000280154 C11orf96Q7Z7L8 435 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 STK11IPQ8N1F8 1099 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
PDCD4-201ENST00000280154 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 EP400Q96L91 3159 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 TEFQ10587 303 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 C10orf62Q5T681 223 aaPredicted RBP11.37□□□□□ -0.59
PDCD4-201ENST00000280154 CCDC70Q6NSX1 233 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 PROM2Q8N271 834 aa11.37□□□□□ -0.59
PDCD4-201ENST00000280154 DDX21Q9NR30 783 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDCD4-201ENST00000280154 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
PDCD4-201ENST00000280154 DNAJC21Q5F1R6 531 aaKnown RBP11.37□□□□□ -0.59
PDCD4-201ENST00000280154 CT47A1Q5JQC4 288 aaPredicted RBP11.37□□□□□ -0.59
PDCD4-201ENST00000280154 TOMM20Q15388 145 aa11.36□□□□□ -0.59
PDCD4-201ENST00000280154 SMAP1Q8IYB5 467 aaPredicted RBP11.36□□□□□ -0.59
PDCD4-201ENST00000280154 NEUROD6Q96NK8 337 aa11.36□□□□□ -0.59
PDCD4-201ENST00000280154 TRAIPQ9BWF2 469 aa11.36□□□□□ -0.59
PDCD4-201ENST00000280154 ASAP1Q9ULH1 1129 aa11.36□□□□□ -0.59
PDCD4-201ENST00000280154 KIF16BQ96L93 1317 aa11.36□□□□□ -0.59
PDCD4-201ENST00000280154 CCDC94Q9BW85 323 aaPredicted RBP11.36□□□□□ -0.59
PDCD4-201ENST00000280154 TNRC6CQ9HCJ0 1690 aaKnown RBP11.36□□□□□ -0.59
PDCD4-201ENST00000280154 INTS3Q68E01 1043 aaKnown RBP11.36□□□□□ -0.59
PDCD4-201ENST00000280154 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
PDCD4-201ENST00000280154 TRERF1Q96PN7 1200 aa11.36□□□□□ -0.59
PDCD4-201ENST00000280154 RRAGDQ9NQL2 400 aaPredicted RBP11.36□□□□□ -0.59
PDCD4-201ENST00000280154 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 MSL3Q8N5Y2 521 aaKnown RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 MAP3K20Q9NYL2 800 aaKnown RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 RCAN3Q9UKA8 241 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 EIF5P55010 431 aaKnown RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 ITPK1Q13572 414 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 IVNS1ABPQ9Y6Y0 642 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 V9GYY5 206 aaPredicted RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 KCNQ2O43526 872 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 IL6STP40189 918 aaPredicted RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 FAM160A1Q05DH4 1040 aa11.35□□□□□ -0.59
PDCD4-201ENST00000280154 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
PDCD4-201ENST00000280154 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 SMAPO00193 183 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 CCDC30Q5VVM6 783 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 PTF1AQ7RTS3 328 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 SIK1P57059 783 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 INF2Q27J81 1249 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 HYPKQ9NX55 129 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 RABL2BQ9UNT1 228 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 ARMC3Q5W041 872 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 TMX1Q9H3N1 280 aa11.34□□□□□ -0.59
PDCD4-201ENST00000280154 RRP1P56182 461 aaKnown RBP11.33□□□□□ -0.6
PDCD4-201ENST00000280154 DDX54Q8TDD1 881 aaKnown RBP11.33□□□□□ -0.6
PDCD4-201ENST00000280154 DBF4Q9UBU7 674 aaPredicted RBP11.33□□□□□ -0.6
PDCD4-201ENST00000280154 ECEL1O95672 775 aa11.33□□□□□ -0.6
PDCD4-201ENST00000280154 CA8P35219 290 aa11.33□□□□□ -0.6
PDCD4-201ENST00000280154 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
PDCD4-201ENST00000280154 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
PDCD4-201ENST00000280154 CXorf56Q9H5V9 222 aa11.32□□□□□ -0.6
PDCD4-201ENST00000280154 BDNFP23560 247 aa11.32□□□□□ -0.6
PDCD4-201ENST00000280154 GSE1Q14687 1217 aa11.32□□□□□ -0.6
PDCD4-201ENST00000280154 SKIV2LQ15477 1246 aaKnown RBP11.32□□□□□ -0.6
PDCD4-201ENST00000280154 CSPP1Q1MSJ5 1256 aa11.32□□□□□ -0.6
PDCD4-201ENST00000280154 C1orf131Q8NDD1 294 aaKnown RBP11.32□□□□□ -0.6
PDCD4-201ENST00000280154 LRRC4BQ9NT99 713 aa11.32□□□□□ -0.6
PDCD4-201ENST00000280154 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDCD4-201ENST00000280154 SUDS3Q9H7L9 328 aaPredicted RBP11.32□□□□□ -0.6
PDCD4-201ENST00000280154 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
PDCD4-201ENST00000280154 KRT24Q2M2I5 525 aa11.31□□□□□ -0.6
PDCD4-201ENST00000280154 L1TD1Q5T7N2 865 aaKnown RBP11.31□□□□□ -0.6
PDCD4-201ENST00000280154 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
PDCD4-201ENST00000280154 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
PDCD4-201ENST00000280154 RTL9Q8NET4 1388 aa11.31□□□□□ -0.6
PDCD4-201ENST00000280154 CASP7P55210 303 aa11.3□□□□□ -0.6
PDCD4-201ENST00000280154 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
PDCD4-201ENST00000280154 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
PDCD4-201ENST00000280154 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
PDCD4-201ENST00000280154 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
PDCD4-201ENST00000280154 MTA1Q13330 715 aa11.3□□□□□ -0.6
PDCD4-201ENST00000280154 BORCS6Q96GS4 357 aa11.3□□□□□ -0.6
PDCD4-201ENST00000280154 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
PDCD4-201ENST00000280154 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
PDCD4-201ENST00000280154 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 SLC39A6Q13433 755 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 ISCA1Q9BUE6 129 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 GEMIN8Q9NWZ8 242 aaKnown RBP11.29□□□□□ -0.6
PDCD4-201ENST00000280154 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 TRAK2O60296 914 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 CLEC4GQ6UXB4 293 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 IRAK4Q9NWZ3 460 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
PDCD4-201ENST00000280154 CCDC87Q9NVE4 849 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 PSME4Q14997 1843 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms