RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
UPF3B-201ENST00000276201 TPM3P06753 285 aa12.37□□□□□ -0.43
UPF3B-201ENST00000276201 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
UPF3B-201ENST00000276201 NIP7Q9Y221 180 aaKnown RBP eCLIP12.37□□□□□ -0.43
UPF3B-201ENST00000276201 RPAP1Q9BWH6 1393 aaPredicted RBP12.37□□□□□ -0.43
UPF3B-201ENST00000276201 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
UPF3B-201ENST00000276201 PRR5LQ6MZQ0 368 aa12.37□□□□□ -0.43
UPF3B-201ENST00000276201 SRCIN1Q9C0H9 1055 aa12.37□□□□□ -0.43
UPF3B-201ENST00000276201 HYPKQ9NX55 129 aa12.37□□□□□ -0.43
UPF3B-201ENST00000276201 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 A0A0G2JLW4 131 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 DPEP1P16444 411 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 NEK4P51957 841 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 TGFB2P61812 414 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 GIGYF2Q6Y7W6 1299 aaKnown RBP12.36□□□□□ -0.43
UPF3B-201ENST00000276201 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
UPF3B-201ENST00000276201 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
UPF3B-201ENST00000276201 NBPF5PQ86XG9 351 aaPredicted RBP12.35□□□□□ -0.43
UPF3B-201ENST00000276201 CNBD1Q8NA66 436 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 KCNA3P22001 575 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 GPTP24298 496 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 CHRNA5P30532 468 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 DMTNQ08495 405 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 GPR162Q16538 588 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 CHMP4AQ9BY43 222 aa12.35□□□□□ -0.43
UPF3B-201ENST00000276201 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
UPF3B-201ENST00000276201 BRCA1P38398 1863 aaKnown RBP12.35□□□□□ -0.43
UPF3B-201ENST00000276201 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
UPF3B-201ENST00000276201 PTMAP06454 111 aaKnown RBP12.34□□□□□ -0.43
UPF3B-201ENST00000276201 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
UPF3B-201ENST00000276201 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
UPF3B-201ENST00000276201 FAM177BA6PVY3 158 aa12.34□□□□□ -0.43
UPF3B-201ENST00000276201 NOLC1Q14978 699 aaKnown RBP eCLIP12.34□□□□□ -0.43
UPF3B-201ENST00000276201 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
UPF3B-201ENST00000276201 ARFGEF2Q9Y6D5 1785 aa12.34□□□□□ -0.43
UPF3B-201ENST00000276201 COL11A2P13942 1736 aaPredicted RBP12.33□□□□□ -0.44
UPF3B-201ENST00000276201 DLEC1Q9Y238 1755 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 SMARCA5O60264 1052 aaPredicted RBP12.33□□□□□ -0.44
UPF3B-201ENST00000276201 MX1P20591 662 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 CHMLP26374 656 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 MEIS3Q99687 375 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 BRIP1Q9BX63 1249 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 NPHP1O15259 732 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 ST5P78524 1137 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 STK31Q9BXU1 1019 aa12.33□□□□□ -0.44
UPF3B-201ENST00000276201 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 ABCC12Q96J65 1359 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 USP25Q9UHP3 1055 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 NTSR2O95665 410 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 PDIA4P13667 645 aaKnown RBP12.32□□□□□ -0.44
UPF3B-201ENST00000276201 UBE2HP62256 183 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 HSP90AB3PQ58FF7 597 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 G2E3Q7L622 706 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 C2CD5Q86YS7 1000 aa12.32□□□□□ -0.44
UPF3B-201ENST00000276201 TNRC6CQ9HCJ0 1690 aaKnown RBP12.31□□□□□ -0.44
UPF3B-201ENST00000276201 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
UPF3B-201ENST00000276201 GNAI2P04899 355 aa12.31□□□□□ -0.44
UPF3B-201ENST00000276201 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
UPF3B-201ENST00000276201 HSPA4P34932 840 aa12.31□□□□□ -0.44
UPF3B-201ENST00000276201 SYCP1Q15431 976 aa12.31□□□□□ -0.44
UPF3B-201ENST00000276201 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
UPF3B-201ENST00000276201 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
UPF3B-201ENST00000276201 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
UPF3B-201ENST00000276201 PDE6BP35913 854 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 LRRCC1Q9C099 1032 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 KDM4AO75164 1064 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 GNAI3P08754 354 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 RIC3Q7Z5B4 369 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 ADCY9O60503 1353 aa12.3□□□□□ -0.44
UPF3B-201ENST00000276201 H0YIN7 160 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 PPP1R42Q7Z4L9 355 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 DIAPH3Q9NSV4 1193 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 KIF3AQ9Y496 699 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 ATP5J2-PTCD1G3V325 749 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 ADCY5O95622 1261 aa12.29□□□□□ -0.44
UPF3B-201ENST00000276201 ZSCAN20P17040 1043 aaPredicted RBP12.29□□□□□ -0.44
UPF3B-201ENST00000276201 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
UPF3B-201ENST00000276201 UTP14AQ9BVJ6 771 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms