RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 A0A1B0GUL6 1792 aa17.65■□□□□ 0.42
TRIM23-202ENST00000274327 GYS1P13807 737 aa17.65■□□□□ 0.42
TRIM23-202ENST00000274327 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
TRIM23-202ENST00000274327 KIF2CQ99661 725 aa17.65■□□□□ 0.42
TRIM23-202ENST00000274327 SGSM2O43147 1006 aa17.65■□□□□ 0.42
TRIM23-202ENST00000274327 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
TRIM23-202ENST00000274327 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
TRIM23-202ENST00000274327 XAGE2Q96GT9 111 aa17.65■□□□□ 0.42
TRIM23-202ENST00000274327 IL25Q9H293 177 aa17.65■□□□□ 0.42
TRIM23-202ENST00000274327 PDE8BO95263 885 aa17.64■□□□□ 0.41
TRIM23-202ENST00000274327 IGHMBP2P38935 993 aaKnown RBP17.64■□□□□ 0.41
TRIM23-202ENST00000274327 ATP2B3Q16720 1220 aa17.64■□□□□ 0.41
TRIM23-202ENST00000274327 ZNF827Q17R98 1081 aa17.64■□□□□ 0.41
TRIM23-202ENST00000274327 RFX7Q2KHR2 1363 aa17.64■□□□□ 0.41
TRIM23-202ENST00000274327 TNRC6CQ9HCJ0 1690 aaKnown RBP17.64■□□□□ 0.41
TRIM23-202ENST00000274327 TAF1P21675 1872 aa17.64■□□□□ 0.41
TRIM23-202ENST00000274327 HIP1O00291 1037 aa17.63■□□□□ 0.41
TRIM23-202ENST00000274327 ADORA1P30542 326 aa17.63■□□□□ 0.41
TRIM23-202ENST00000274327 CDC5LQ99459 802 aaKnown RBP17.63■□□□□ 0.41
TRIM23-202ENST00000274327 MPHOSPH8Q99549 860 aa17.63■□□□□ 0.41
TRIM23-202ENST00000274327 FGFR2P21802 821 aa17.63■□□□□ 0.41
TRIM23-202ENST00000274327 TM4SF1P30408 202 aa17.63■□□□□ 0.41
TRIM23-202ENST00000274327 NLRP3Q96P20 1036 aa17.62■□□□□ 0.41
TRIM23-202ENST00000274327 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
TRIM23-202ENST00000274327 DEKP35659 375 aaKnown RBP17.61■□□□□ 0.41
TRIM23-202ENST00000274327 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
TRIM23-202ENST00000274327 RUFY2Q8WXA3 655 aa17.61■□□□□ 0.41
TRIM23-202ENST00000274327 EDC3Q96F86 508 aaKnown RBP17.61■□□□□ 0.41
TRIM23-202ENST00000274327 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
TRIM23-202ENST00000274327 AKAP11Q9UKA4 1901 aa17.61■□□□□ 0.41
TRIM23-202ENST00000274327 IFIT1P09914 478 aaKnown RBP17.61■□□□□ 0.41
TRIM23-202ENST00000274327 PUM3Q15397 648 aaKnown RBP17.61■□□□□ 0.41
TRIM23-202ENST00000274327 CWC27Q6UX04 472 aaKnown RBP17.61■□□□□ 0.41
TRIM23-202ENST00000274327 TICAM2Q86XR7 235 aa17.61■□□□□ 0.41
TRIM23-202ENST00000274327 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
TRIM23-202ENST00000274327 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
TRIM23-202ENST00000274327 RAD50Q92878 1312 aa17.6■□□□□ 0.41
TRIM23-202ENST00000274327 BECN1Q14457 450 aa17.6■□□□□ 0.41
TRIM23-202ENST00000274327 LPIN2Q92539 896 aa17.6■□□□□ 0.41
TRIM23-202ENST00000274327 ZNF512BQ96KM6 892 aaPredicted RBP17.6■□□□□ 0.41
TRIM23-202ENST00000274327 DNAJC2Q99543 621 aaKnown RBP17.6■□□□□ 0.41
TRIM23-202ENST00000274327 ANO2Q9NQ90 1003 aa17.6■□□□□ 0.41
TRIM23-202ENST00000274327 NDUFB9Q9Y6M9 179 aa17.6■□□□□ 0.41
TRIM23-202ENST00000274327 TTC39AQ5SRH9 613 aa17.59■□□□□ 0.41
TRIM23-202ENST00000274327 LSG1Q9H089 658 aaKnown RBP17.59■□□□□ 0.41
TRIM23-202ENST00000274327 BSDC1Q9NW68 430 aaPredicted RBP17.59■□□□□ 0.41
TRIM23-202ENST00000274327 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
TRIM23-202ENST00000274327 TFCP2L1Q9NZI6 479 aa17.59■□□□□ 0.41
TRIM23-202ENST00000274327 CHRNDQ07001 517 aa17.58■□□□□ 0.41
TRIM23-202ENST00000274327 NMIQ13287 307 aaPredicted RBP17.58■□□□□ 0.41
TRIM23-202ENST00000274327 GORABQ5T7V8 394 aa17.58■□□□□ 0.41
TRIM23-202ENST00000274327 PRR5LQ6MZQ0 368 aa17.58■□□□□ 0.41
TRIM23-202ENST00000274327 CCDC24Q8N4L8 307 aa17.58■□□□□ 0.41
TRIM23-202ENST00000274327 CNBD1Q8NA66 436 aa17.58■□□□□ 0.41
TRIM23-202ENST00000274327 KBTBD3Q8NAB2 608 aa17.58■□□□□ 0.41
TRIM23-202ENST00000274327 HELBQ8NG08 1087 aaPredicted RBP17.58■□□□□ 0.41
TRIM23-202ENST00000274327 SLC4A3P48751 1232 aa17.58■□□□□ 0.4
TRIM23-202ENST00000274327 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
TRIM23-202ENST00000274327 FLAD1Q8NFF5 587 aa17.58■□□□□ 0.4
TRIM23-202ENST00000274327 CELF1Q92879 486 aaKnown RBP17.58■□□□□ 0.4
TRIM23-202ENST00000274327 SNX21Q969T3 373 aa17.58■□□□□ 0.4
TRIM23-202ENST00000274327 IL17RAQ96F46 866 aa17.58■□□□□ 0.4
TRIM23-202ENST00000274327 TBC1D2Q9BYX2 928 aa17.58■□□□□ 0.4
TRIM23-202ENST00000274327 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
TRIM23-202ENST00000274327 SERPINB2P05120 415 aa17.57■□□□□ 0.4
TRIM23-202ENST00000274327 SLC5A1P13866 664 aa17.57■□□□□ 0.4
TRIM23-202ENST00000274327 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
TRIM23-202ENST00000274327 FAM227BQ96M60 508 aa17.57■□□□□ 0.4
TRIM23-202ENST00000274327 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
TRIM23-202ENST00000274327 POLRMTO00411 1230 aaKnown RBP17.56■□□□□ 0.4
TRIM23-202ENST00000274327 GOLIM4O00461 696 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 TAF5LO75529 589 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 DDR1Q08345 913 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 CAMKK2Q96RR4 588 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 MED23Q9ULK4 1368 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 A0A0D9SFI3 127 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 MCCP23508 829 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 ARID4AP29374 1257 aaPredicted RBP17.56■□□□□ 0.4
TRIM23-202ENST00000274327 SCARF1Q14162 830 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 RABEP1Q15276 862 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 DAXXQ9UER7 740 aaPredicted RBP17.56■□□□□ 0.4
TRIM23-202ENST00000274327 MYH7P12883 1935 aa17.56■□□□□ 0.4
TRIM23-202ENST00000274327 NPHP1O15259 732 aa17.55■□□□□ 0.4
TRIM23-202ENST00000274327 HSPA4P34932 840 aa17.55■□□□□ 0.4
TRIM23-202ENST00000274327 ANAPC15P60006 121 aa17.55■□□□□ 0.4
TRIM23-202ENST00000274327 RPS8P62241 208 aaKnown RBP17.55■□□□□ 0.4
TRIM23-202ENST00000274327 CCDC102BQ68D86 513 aa17.55■□□□□ 0.4
TRIM23-202ENST00000274327 MINPP1Q9UNW1 487 aa17.55■□□□□ 0.4
TRIM23-202ENST00000274327 PNPLA7Q6ZV29 1317 aa17.55■□□□□ 0.4
TRIM23-202ENST00000274327 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
TRIM23-202ENST00000274327 ST5P78524 1137 aa17.54■□□□□ 0.4
TRIM23-202ENST00000274327 KIAA1211Q6ZU35 1233 aa17.54■□□□□ 0.4
TRIM23-202ENST00000274327 SNAP23O00161 211 aa17.54■□□□□ 0.4
TRIM23-202ENST00000274327 MCAMP43121 646 aa17.54■□□□□ 0.4
TRIM23-202ENST00000274327 PHKA1P46020 1223 aa17.54■□□□□ 0.4
TRIM23-202ENST00000274327 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
TRIM23-202ENST00000274327 ANTXR1Q9H6X2 564 aa17.54■□□□□ 0.4
TRIM23-202ENST00000274327 ZAP70P43403 619 aa17.53■□□□□ 0.4
TRIM23-202ENST00000274327 PTH1RQ03431 593 aa17.53■□□□□ 0.4
TRIM23-202ENST00000274327 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms