RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZRSR1Q15695 479 aaKnown RBP15.11■□□□□ 0.01
COL8A1-202ENST00000273342 POLR3GO15318 223 aaPredicted RBP15.11■□□□□ 0.01
COL8A1-202ENST00000273342 GOLGA8FQ08AF8 430 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 GOLGA8DPQ0D2H9 430 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 IFNKQ9P0W0 207 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 HIP1O00291 1037 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 EPHA10Q5JZY3 1008 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 MRFAP1L1Q96HT8 127 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 GJB4Q9NTQ9 266 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 COL15A1P39059 1388 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 TNRQ92752 1358 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 PTPDC1A2A3K4 754 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 SYCP1Q15431 976 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 DPCR1Q3MIW9 517 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 KSR2Q6VAB6 950 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 RIC3Q7Z5B4 369 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 XPO4Q9C0E2 1151 aaKnown RBP15.1■□□□□ 0.01
COL8A1-202ENST00000273342 KCNA6P17658 529 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 HSP90AA4PQ58FG1 418 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 CEP57L1Q8IYX8 460 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
COL8A1-202ENST00000273342 FAM208AQ9UK61 1670 aaKnown RBP15.1■□□□□ 0.01
COL8A1-202ENST00000273342 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
COL8A1-202ENST00000273342 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
COL8A1-202ENST00000273342 SF3A1Q15459 793 aaKnown RBP15.09■□□□□ 0.01
COL8A1-202ENST00000273342 E4F1Q66K89 784 aaPredicted RBP15.09■□□□□ 0.01
COL8A1-202ENST00000273342 STOX1Q6ZVD7 989 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 ANO10Q9NW15 660 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 LMOD1P29536 600 aaPredicted RBP15.09■□□□□ 0.01
COL8A1-202ENST00000273342 SLC39A6Q13433 755 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 GPHNQ9NQX3 736 aaPredicted RBP15.09■□□□□ 0.01
COL8A1-202ENST00000273342 ERBB3P21860 1342 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 NRXN3Q9Y4C0 1643 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 CDK11BP21127 795 aaKnown RBP15.09■□□□□ 0.01
COL8A1-202ENST00000273342 TFCP2Q12800 502 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 MTX1Q13505 466 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 ARHGAP29Q52LW3 1261 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 NBPF11Q86T75 865 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 TMEM51Q9NW97 253 aa15.09■□□□□ 0.01
COL8A1-202ENST00000273342 RICTORQ6R327 1708 aa15.08■□□□□ 0.01
COL8A1-202ENST00000273342 RGPD1P0DJD0 1748 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 SIRT1Q96EB6 747 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 DNAI1Q9UI46 699 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 DBNLQ9UJU6 430 aaKnown RBP15.08■□□□□ 0
COL8A1-202ENST00000273342 AKAP12Q02952 1782 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0
COL8A1-202ENST00000273342 CTDNEP1O95476 244 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 CDC25BP30305 580 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 ESCO1Q5FWF5 840 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 NSUN7Q8NE18 718 aaKnown RBP15.08■□□□□ 0
COL8A1-202ENST00000273342 DBNDD2Q9BQY9 259 aa15.08■□□□□ 0
COL8A1-202ENST00000273342 ZSCAN16Q9H4T2 348 aaPredicted RBP15.08■□□□□ 0
COL8A1-202ENST00000273342 NDUFA8P51970 172 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 ARMCX5Q6P1M9 558 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 SARM1Q6SZW1 724 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 PPP1R13BQ96KQ4 1090 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 NEUROD6Q96NK8 337 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 PXDNLA1KZ92 1463 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 SEC31AO94979 1220 aaKnown RBP15.07■□□□□ 0
COL8A1-202ENST00000273342 FAM160A1Q05DH4 1040 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 NOL10Q9BSC4 688 aaKnown RBP15.07■□□□□ 0
COL8A1-202ENST00000273342 PCDHA7Q9UN72 937 aa15.07■□□□□ 0
COL8A1-202ENST00000273342 CLCN6P51797 869 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 MYD88Q99836 296 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 HMG20BQ9P0W2 317 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 RCOR1Q9UKL0 485 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 TMEM2Q9UHN6 1383 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 NEMFO60524 1076 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 GIGYF1O75420 1035 aaPredicted RBP15.06■□□□□ 0
COL8A1-202ENST00000273342 SFPQP23246 707 aaKnown RBP eCLIP15.06■□□□□ 0
COL8A1-202ENST00000273342 MED23Q9ULK4 1368 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 IGKV5-2P06315 115 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 ATP1A3P13637 1013 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 IRX5P78411 483 aaPredicted RBP15.06■□□□□ 0
COL8A1-202ENST00000273342 LINS1Q8NG48 757 aa15.06■□□□□ 0
COL8A1-202ENST00000273342 SPATA31D1Q6ZQQ2 1576 aa15.05■□□□□ 0
COL8A1-202ENST00000273342 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ 0
COL8A1-202ENST00000273342 ATP5J2-PTCD1G3V325 749 aa15.05■□□□□ 0
COL8A1-202ENST00000273342 PTCD1O75127 700 aaKnown RBP15.05■□□□□ 0
COL8A1-202ENST00000273342 ALDH1L1O75891 902 aa15.05■□□□□ 0
COL8A1-202ENST00000273342 URI1O94763 535 aaPredicted RBP15.05■□□□□ 0
COL8A1-202ENST00000273342 ZCCHC17Q9NP64 241 aaKnown RBP15.05■□□□□ 0
COL8A1-202ENST00000273342 CLIC4Q9Y696 253 aa15.05■□□□□ 0
COL8A1-202ENST00000273342 HAND2P61296 217 aa15.05■□□□□ -0
COL8A1-202ENST00000273342 PSME1Q06323 249 aa15.05■□□□□ -0
COL8A1-202ENST00000273342 KRT32Q14532 448 aa15.05■□□□□ -0
COL8A1-202ENST00000273342 STK38Q15208 465 aa15.05■□□□□ -0
COL8A1-202ENST00000273342 C1orf141Q5JVX7 400 aa15.05■□□□□ -0
COL8A1-202ENST00000273342 TTLL5Q6EMB2 1281 aa15.05■□□□□ -0
COL8A1-202ENST00000273342 ENGASEQ8NFI3 743 aa15.05■□□□□ -0
COL8A1-202ENST00000273342 GOLIM4O00461 696 aa15.04■□□□□ -0
COL8A1-202ENST00000273342 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
COL8A1-202ENST00000273342 STK11IPQ8N1F8 1099 aa15.04■□□□□ -0
COL8A1-202ENST00000273342 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
COL8A1-202ENST00000273342 CCDC66A2RUB6 948 aa15.04■□□□□ -0
COL8A1-202ENST00000273342 CTAGE5O15320 804 aa15.04■□□□□ -0
COL8A1-202ENST00000273342 CAVIN2O95810 425 aa15.04■□□□□ -0
COL8A1-202ENST00000273342 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
COL8A1-202ENST00000273342 NEK11Q8NG66 645 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms