RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 PDRG1Q9NUG6 133 aa12.03□□□□□ -0.48
CPNE9-201ENST00000273027 GNPATO15228 680 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 F13A1P00488 732 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 AK2P54819 239 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 TGFB2P61812 414 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 FSTL1Q12841 308 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 TSHZ3Q63HK5 1081 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 ZNF790Q6PG37 636 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
CPNE9-201ENST00000273027 IFNL2Q8IZJ0 200 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 PIGBQ92521 554 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 METTL22Q9BUU2 404 aaPredicted RBP12.02□□□□□ -0.49
CPNE9-201ENST00000273027 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 COPRSQ9NQ92 184 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 ZKSCAN5Q9Y2L8 839 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 SPEF2Q9C093 1822 aa12.02□□□□□ -0.49
CPNE9-201ENST00000273027 CYP27B1O15528 508 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 RRP9O43818 475 aaKnown RBP12.01□□□□□ -0.49
CPNE9-201ENST00000273027 C9orf131Q5VYM1 1079 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 DCAF5Q96JK2 942 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 UPF3BQ9BZI7 483 aaKnown RBP12.01□□□□□ -0.49
CPNE9-201ENST00000273027 AFDNP55196 1824 aaKnown RBP12.01□□□□□ -0.49
CPNE9-201ENST00000273027 ELP1O95163 1332 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 PCDH11XQ9BZA7 1347 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 PCDH11YQ9BZA8 1340 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 UBR3Q6ZT12 1888 aa12.01□□□□□ -0.49
CPNE9-201ENST00000273027 C4BP0C0L5 1744 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 SYCE3A1L190 88 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 SNRPA1P09661 255 aaKnown RBP12□□□□□ -0.49
CPNE9-201ENST00000273027 DPEP1P16444 411 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
CPNE9-201ENST00000273027 SYT1P21579 422 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 SIK1P57059 783 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 AACSQ86V21 672 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 RRAGCQ9HB90 399 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 GPR108Q9NPR9 543 aa12□□□□□ -0.49
CPNE9-201ENST00000273027 KCNQ3O43525 872 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 HMGB1P09429 215 aaKnown RBP11.99□□□□□ -0.49
CPNE9-201ENST00000273027 ATP5JP18859 108 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 KCNJ4P48050 445 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 GCKRQ14397 625 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 USPL1Q5W0Q7 1092 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 MTERF4Q7Z6M4 381 aaKnown RBP11.99□□□□□ -0.49
CPNE9-201ENST00000273027 MAP7D2Q96T17 732 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 WDR90Q96KV7 1748 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 TCHHQ07283 1943 aa11.99□□□□□ -0.49
CPNE9-201ENST00000273027 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 NEURL1BA8MQ27 555 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 SASH1O94885 1247 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 CAVIN2O95810 425 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 PHKG2P15735 406 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 ATP6V1AP38606 617 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 ITPK1Q13572 414 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 PDIA6Q15084 440 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 LRRFIP1Q32MZ4 808 aaKnown RBP11.98□□□□□ -0.49
CPNE9-201ENST00000273027 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
CPNE9-201ENST00000273027 TRAPPC3LQ5T215 181 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 BLOC1S2Q6QNY1 142 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 NLGN1Q8N2Q7 840 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 JAKMIP1Q96N16 626 aaKnown RBP11.98□□□□□ -0.49
CPNE9-201ENST00000273027 FMNL2Q96PY5 1086 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 SCAND2PQ9GZW5 306 aaPredicted RBP11.98□□□□□ -0.49
CPNE9-201ENST00000273027 BICC1Q9H694 974 aaKnown RBP11.98□□□□□ -0.49
CPNE9-201ENST00000273027 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
CPNE9-201ENST00000273027 PCNTO95613 3336 aa11.98□□□□□ -0.49
CPNE9-201ENST00000273027 ZNF831Q5JPB2 1677 aa11.97□□□□□ -0.49
CPNE9-201ENST00000273027 GJB2P29033 226 aa11.97□□□□□ -0.49
CPNE9-201ENST00000273027 KRT85P78386 507 aa11.97□□□□□ -0.49
CPNE9-201ENST00000273027 ATL3Q6DD88 541 aa11.97□□□□□ -0.49
CPNE9-201ENST00000273027 RGS22Q8NE09 1264 aa11.97□□□□□ -0.49
CPNE9-201ENST00000273027 CCDC87Q9NVE4 849 aa11.97□□□□□ -0.49
CPNE9-201ENST00000273027 ASAP1Q9ULH1 1129 aa11.97□□□□□ -0.49
CPNE9-201ENST00000273027 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
CPNE9-201ENST00000273027 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
CPNE9-201ENST00000273027 SLC27A2O14975 620 aa11.96□□□□□ -0.49
CPNE9-201ENST00000273027 RPS6KB1P23443 525 aa11.96□□□□□ -0.49
CPNE9-201ENST00000273027 PRPF40BQ6NWY9 871 aaKnown RBP11.96□□□□□ -0.49
CPNE9-201ENST00000273027 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
CPNE9-201ENST00000273027 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
CPNE9-201ENST00000273027 LLPHQ9BRT6 129 aaKnown RBP11.96□□□□□ -0.49
CPNE9-201ENST00000273027 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
CPNE9-201ENST00000273027 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
CPNE9-201ENST00000273027 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
CPNE9-201ENST00000273027 RNF181Q9P0P0 153 aa11.96□□□□□ -0.49
CPNE9-201ENST00000273027 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
CPNE9-201ENST00000273027 PARP3Q9Y6F1 533 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms