RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CTAGE6Q86UF2 777 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 CERS3Q8IU89 383 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 CNNM3Q8NE01 707 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 CWC25Q9NXE8 425 aaPredicted RBP15.03■□□□□ -0
PRDM16-201ENST00000270722 CACYBPQ9HB71 228 aaKnown RBP15.02■□□□□ -0
PRDM16-201ENST00000270722 LACTBP83111 547 aaPredicted RBP15.02■□□□□ -0
PRDM16-201ENST00000270722 MFSD6Q6ZSS7 791 aa15.02■□□□□ -0
PRDM16-201ENST00000270722 SMC1BQ8NDV3 1235 aa15.02■□□□□ -0
PRDM16-201ENST00000270722 LPXNO60711 386 aa15.02■□□□□ -0
PRDM16-201ENST00000270722 GABPB1Q06547 395 aaPredicted RBP15.02□□□□□ -0.01
PRDM16-201ENST00000270722 SEPT8Q92599 483 aa15.02□□□□□ -0.01
PRDM16-201ENST00000270722 CASKIN1Q8WXD9 1431 aa15.02□□□□□ -0.01
PRDM16-201ENST00000270722 BIRC2Q13490 618 aa15.02□□□□□ -0.01
PRDM16-201ENST00000270722 KRT23Q9C075 422 aa15.02□□□□□ -0.01
PRDM16-201ENST00000270722 HMGB3O15347 200 aaKnown RBP15.01□□□□□ -0.01
PRDM16-201ENST00000270722 PFDN1O60925 122 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 CLCN1P35523 988 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 IFT74Q96LB3 600 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 RABEP2Q9H5N1 569 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 CALM1P0DP23 149 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 CALM2P0DP24 149 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 CALM3P0DP25 149 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 NBPF6Q5VWK0 638 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 NBPF5PQ86XG9 351 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-201ENST00000270722 NBPF4Q96M43 638 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 EXOC1Q9NV70 894 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 OGFRQ9NZT2 677 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 SH3BP5O60239 455 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 TUBB4AP04350 444 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 SPAG5Q96R06 1193 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 NCAPGQ9BPX3 1015 aa15.01□□□□□ -0.01
PRDM16-201ENST00000270722 A0A1W2PRG0 241 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 MX1P20591 662 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 ALDH1L2Q3SY69 923 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 DDX19AQ9NUU7 478 aaKnown RBP15□□□□□ -0.01
PRDM16-201ENST00000270722 PTCD1O75127 700 aaKnown RBP15□□□□□ -0.01
PRDM16-201ENST00000270722 CFAP70Q5T0N1 1121 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 EYA3Q99504 573 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 NAP1L4Q99733 375 aaKnown RBP15□□□□□ -0.01
PRDM16-201ENST00000270722 ADAMTS8Q9UP79 889 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
PRDM16-201ENST00000270722 DNAJC8O75937 253 aaPredicted RBP15□□□□□ -0.01
PRDM16-201ENST00000270722 ARFGAP3Q9NP61 516 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 MTUS1Q9ULD2 1270 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 IDEP14735 1019 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 ZNF804AQ7Z570 1209 aa15□□□□□ -0.01
PRDM16-201ENST00000270722 GOLGA8BA8MQT2 603 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
PRDM16-201ENST00000270722 SPDYE3A6NKU9 549 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 CALML3P27482 149 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 SSFA2P28290 1259 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 TRIM4Q9C037 500 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 PTPRCP08575 1304 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 BUB1BO60566 1050 aaPredicted RBP14.99□□□□□ -0.01
PRDM16-201ENST00000270722 IARSP41252 1262 aaKnown RBP14.99□□□□□ -0.01
PRDM16-201ENST00000270722 GOLGA8AA7E2F4 631 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 OPA1O60313 960 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 CCDC183Q5T5S1 534 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 THEGQ9P2T0 379 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 KIF5AQ12840 1032 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 GLT8D2Q9H1C3 349 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 MSH6P52701 1360 aa14.99□□□□□ -0.01
PRDM16-201ENST00000270722 ZKSCAN8Q15776 578 aaPredicted RBP14.99□□□□□ -0.01
PRDM16-201ENST00000270722 PRR16Q569H4 304 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 HS2ST1Q7LGA3 356 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 DKC1O60832 514 aaKnown RBP eCLIP14.98□□□□□ -0.011e-6■■■■■ 68.7
PRDM16-201ENST00000270722 MPRIPQ6WCQ1 1025 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 PPP1R9BQ96SB3 815 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 KCNG1Q9UIX4 513 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 SESN3P58005 492 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 GOLGA1Q92805 767 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 RSPH14Q9UHP6 348 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 CAMSAP2Q08AD1 1489 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 ARHGAP25P42331 645 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 EVI5LQ96CN4 794 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 RIOK3O14730 519 aaKnown RBP14.98□□□□□ -0.01
PRDM16-201ENST00000270722 PHLDB2Q86SQ0 1253 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 ESR2Q92731 530 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 ZC3H6P61129 1189 aaKnown RBP14.98□□□□□ -0.01
PRDM16-201ENST00000270722 CSRNP2Q9H175 543 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 BIN2Q9UBW5 565 aaPredicted RBP14.98□□□□□ -0.01
PRDM16-201ENST00000270722 STK24Q9Y6E0 443 aa14.98□□□□□ -0.01
PRDM16-201ENST00000270722 AFAP1Q8N556 730 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 NOD1Q9Y239 953 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 TUBBP07437 444 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 ARHGEF6Q15052 776 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 EIF2AQ9BY44 585 aaKnown RBP14.97□□□□□ -0.01
PRDM16-201ENST00000270722 PRPF4BQ13523 1007 aaKnown RBP14.97□□□□□ -0.01
PRDM16-201ENST00000270722 ERBINQ96RT1 1412 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 IFT140Q96RY7 1462 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 AFAP1L2Q8N4X5 818 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 SETDB2Q96T68 719 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 EFCC1Q9HA90 598 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 VGLL3A8MV65 326 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 TTC19Q6DKK2 380 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms