RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DLEC1Q9Y238 1755 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 IRS4O14654 1257 aaPredicted RBP18.71■□□□□ 0.58
COPS3-201ENST00000268717 KCNA3P22001 575 aa18.71■□□□□ 0.58
COPS3-201ENST00000268717 CHMLP26374 656 aa18.71■□□□□ 0.58
COPS3-201ENST00000268717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.58
COPS3-201ENST00000268717 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
COPS3-201ENST00000268717 SH3TC1Q8TE82 1336 aa18.7■□□□□ 0.58
COPS3-201ENST00000268717 TFCP2Q12800 502 aa18.7■□□□□ 0.58
COPS3-201ENST00000268717 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
COPS3-201ENST00000268717 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
COPS3-201ENST00000268717 UTP14AQ9BVJ6 771 aaKnown RBP18.7■□□□□ 0.58
COPS3-201ENST00000268717 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
COPS3-201ENST00000268717 TTLL11Q8NHH1 800 aa18.69■□□□□ 0.58
COPS3-201ENST00000268717 ESYT1Q9BSJ8 1104 aa18.69■□□□□ 0.58
COPS3-201ENST00000268717 PRR5LQ6MZQ0 368 aa18.68■□□□□ 0.58
COPS3-201ENST00000268717 USP26Q9BXU7 913 aa18.68■□□□□ 0.58
COPS3-201ENST00000268717 DAXXQ9UER7 740 aaPredicted RBP18.68■□□□□ 0.58
COPS3-201ENST00000268717 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
COPS3-201ENST00000268717 ATP5JP18859 108 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 CHRNA5P30532 468 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 SUSD4Q5VX71 490 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 TICAM2Q86XR7 235 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 NTSR2O95665 410 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 CNBD1Q8NA66 436 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 CCDC8Q9H0W5 538 aaPredicted RBP18.67■□□□□ 0.58
COPS3-201ENST00000268717 PIM2Q9P1W9 311 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 DBNLQ9UJU6 430 aaKnown RBP18.67■□□□□ 0.58
COPS3-201ENST00000268717 NIP7Q9Y221 180 aaKnown RBP eCLIP18.67■□□□□ 0.58
COPS3-201ENST00000268717 BCS1LQ9Y276 419 aa18.67■□□□□ 0.58
COPS3-201ENST00000268717 ZNF609O15014 1411 aa18.66■□□□□ 0.58
COPS3-201ENST00000268717 ANKRD18BA2A2Z9 1011 aa18.66■□□□□ 0.58
COPS3-201ENST00000268717 ERICH6Q7L0X2 663 aa18.66■□□□□ 0.58
COPS3-201ENST00000268717 TLR7Q9NYK1 1049 aaKnown RBP18.66■□□□□ 0.58
COPS3-201ENST00000268717 RFX7Q2KHR2 1363 aa18.65■□□□□ 0.58
COPS3-201ENST00000268717 COL11A2P13942 1736 aaPredicted RBP18.65■□□□□ 0.58
COPS3-201ENST00000268717 HIP1O00291 1037 aa18.65■□□□□ 0.58
COPS3-201ENST00000268717 NBPF5PQ86XG9 351 aaPredicted RBP18.65■□□□□ 0.58
COPS3-201ENST00000268717 BRIP1Q9BX63 1249 aa18.65■□□□□ 0.58
COPS3-201ENST00000268717 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
COPS3-201ENST00000268717 LAMB2P55268 1798 aa18.64■□□□□ 0.58
COPS3-201ENST00000268717 ITGA6P23229 1130 aa18.64■□□□□ 0.57
COPS3-201ENST00000268717 LRRC24Q50LG9 513 aa18.64■□□□□ 0.57
COPS3-201ENST00000268717 TAF7LQ5H9L4 462 aa18.64■□□□□ 0.57
COPS3-201ENST00000268717 CCDC24Q8N4L8 307 aa18.64■□□□□ 0.57
COPS3-201ENST00000268717 GREM2Q9H772 168 aa18.64■□□□□ 0.57
COPS3-201ENST00000268717 CEP126Q9P2H0 1117 aa18.64■□□□□ 0.57
COPS3-201ENST00000268717 MYH3P11055 1940 aa18.64■□□□□ 0.57
COPS3-201ENST00000268717 NPHP1O15259 732 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 ST5P78524 1137 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
COPS3-201ENST00000268717 SNX21Q969T3 373 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 ZNF594Q96JF6 807 aaPredicted RBP18.63■□□□□ 0.57
COPS3-201ENST00000268717 KIF2CQ99661 725 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 PDE6BP35913 854 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 C2CD5Q86YS7 1000 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 IL27Q8NEV9 243 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
COPS3-201ENST00000268717 RUFY2Q8WXA3 655 aa18.63■□□□□ 0.57
COPS3-201ENST00000268717 H0YIN7 160 aa18.62■□□□□ 0.57
COPS3-201ENST00000268717 SGSM2O43147 1006 aa18.62■□□□□ 0.57
COPS3-201ENST00000268717 TPTE2Q6XPS3 522 aa18.62■□□□□ 0.57
COPS3-201ENST00000268717 IL17RAQ96F46 866 aa18.62■□□□□ 0.57
COPS3-201ENST00000268717 RIPOR2Q9Y4F9 1068 aa18.62■□□□□ 0.57
COPS3-201ENST00000268717 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
COPS3-201ENST00000268717 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
COPS3-201ENST00000268717 DBNDD2Q9BQY9 259 aa18.61■□□□□ 0.57
COPS3-201ENST00000268717 PUS3Q9BZE2 481 aaKnown RBP18.61■□□□□ 0.57
COPS3-201ENST00000268717 NYXQ9GZU5 481 aa18.61■□□□□ 0.57
COPS3-201ENST00000268717 RAD50Q92878 1312 aa18.61■□□□□ 0.57
COPS3-201ENST00000268717 RIC1Q4ADV7 1423 aa18.61■□□□□ 0.57
COPS3-201ENST00000268717 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
COPS3-201ENST00000268717 LDHAL6AQ6ZMR3 332 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 CCDC85AQ96PX6 553 aaPredicted RBP18.6■□□□□ 0.57
COPS3-201ENST00000268717 HAUS7Q99871 368 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 TBC1D2Q9BYX2 928 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 CACNA1SQ13698 1873 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 A0A1B0GUL7 405 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 MCCP23508 829 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 ANAPC15P60006 121 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 RABEP1Q15276 862 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 SLC10A5Q5PT55 438 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 SNRKQ9NRH2 765 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 DIAPH3Q9NSV4 1193 aa18.6■□□□□ 0.57
COPS3-201ENST00000268717 AK9Q5TCS8 1911 aa18.59■□□□□ 0.57
COPS3-201ENST00000268717 MROH5Q6ZUA9 1318 aa18.59■□□□□ 0.57
COPS3-201ENST00000268717 TTLL6Q8N841 843 aa18.59■□□□□ 0.57
COPS3-201ENST00000268717 BOLA2Q9H3K6 86 aa18.59■□□□□ 0.57
COPS3-201ENST00000268717 DDX60Q8IY21 1712 aaKnown RBP18.59■□□□□ 0.57
COPS3-201ENST00000268717 HCLS1P14317 486 aaPredicted RBP18.58■□□□□ 0.56
COPS3-201ENST00000268717 VGLL2Q8N8G2 317 aa18.58■□□□□ 0.56
COPS3-201ENST00000268717 TNRC6CQ9HCJ0 1690 aaKnown RBP18.57■□□□□ 0.56
COPS3-201ENST00000268717 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
COPS3-201ENST00000268717 ARHGAP27Q6ZUM4 889 aa18.57■□□□□ 0.56
COPS3-201ENST00000268717 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
COPS3-201ENST00000268717 ZNF784Q8NCA9 323 aaPredicted RBP18.57■□□□□ 0.56
COPS3-201ENST00000268717 ANO2Q9NQ90 1003 aa18.57■□□□□ 0.56
COPS3-201ENST00000268717 CNNM1Q9NRU3 951 aa18.57■□□□□ 0.56
COPS3-201ENST00000268717 SBF1O95248 1867 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms