RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 WDR63Q8IWG1 891 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
CDH11-201ENST00000268603 GIPC1O14908 333 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 PSMD6Q15008 389 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 CCDC183Q5T5S1 534 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 DACT3Q96B18 629 aaPredicted RBP14.29□□□□□ -0.12
CDH11-201ENST00000268603 RSPH14Q9UHP6 348 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 AGTPBP1Q9UPW5 1226 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 KCNK9Q9NPC2 374 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
CDH11-201ENST00000268603 MX1P20591 662 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 SLC8A3P57103 927 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 SEC62Q99442 399 aaKnown RBP14.29□□□□□ -0.12
CDH11-201ENST00000268603 SCAND2PQ9GZW5 306 aaPredicted RBP14.29□□□□□ -0.12
CDH11-201ENST00000268603 SLC12A5Q9H2X9 1139 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 WDR46O15213 610 aaKnown RBP14.28□□□□□ -0.12
CDH11-201ENST00000268603 PTGS1P23219 599 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 SARNPP82979 210 aaKnown RBP14.28□□□□□ -0.12
CDH11-201ENST00000268603 TRAF1Q13077 416 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 IFIT1BQ5T764 474 aaKnown RBP14.28□□□□□ -0.12
CDH11-201ENST00000268603 FYCO1Q9BQS8 1478 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 PKD2L1Q9P0L9 805 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.28□□□□□ -0.12
CDH11-201ENST00000268603 KRT5P13647 590 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 HSPA1LP34931 641 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 KRT9P35527 623 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 ZSCAN30Q86W11 494 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 ACSBG1Q96GR2 724 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 PPANQ9NQ55 473 aaKnown RBP14.28□□□□□ -0.12
CDH11-201ENST00000268603 SPDYE3A6NKU9 549 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 RMND1Q9NWS8 449 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 ATP6V0A2Q9Y487 856 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 CTAGE5O15320 804 aa14.28□□□□□ -0.12
CDH11-201ENST00000268603 ALDH3A1P30838 453 aa14.27□□□□□ -0.12
CDH11-201ENST00000268603 STMN4Q9H169 189 aaPredicted RBP14.27□□□□□ -0.12
CDH11-201ENST00000268603 PPP1R7Q15435 360 aa14.27□□□□□ -0.12
CDH11-201ENST00000268603 PDE1CQ14123 709 aaPredicted RBP14.27□□□□□ -0.12
CDH11-201ENST00000268603 DIXDC1Q155Q3 683 aa14.27□□□□□ -0.12
CDH11-201ENST00000268603 NBPF8Q3BBV2 869 aa14.27□□□□□ -0.12
CDH11-201ENST00000268603 NBPF14Q5TI25 921 aa14.27□□□□□ -0.12
CDH11-201ENST00000268603 NAPAP54920 295 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 CCDC121Q6ZUS5 278 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 TRIM6Q9C030 488 aaPredicted RBP14.27□□□□□ -0.13
CDH11-201ENST00000268603 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
CDH11-201ENST00000268603 NBPF7P0C2Y1 421 aaPredicted RBP14.27□□□□□ -0.13
CDH11-201ENST00000268603 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.13
CDH11-201ENST00000268603 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.13
CDH11-201ENST00000268603 KANK3Q6NY19 840 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 SNW1Q13573 536 aaKnown RBP14.27□□□□□ -0.13
CDH11-201ENST00000268603 HSP90AA4PQ58FG1 418 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 TTC14Q96N46 770 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 SETDB2Q96T68 719 aa14.27□□□□□ -0.13
CDH11-201ENST00000268603 CASQ2O14958 399 aaPredicted RBP14.26□□□□□ -0.13
CDH11-201ENST00000268603 WAPLQ7Z5K2 1190 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 STIM2Q9P246 746 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 RIMBP2O15034 1052 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 EHBP1Q8NDI1 1231 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 FAM204AQ9H8W3 233 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 TACC1O75410 805 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
CDH11-201ENST00000268603 INF2Q27J81 1249 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 PARP3Q9Y6F1 533 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 ARHGAP5Q13017 1502 aa14.26□□□□□ -0.13
CDH11-201ENST00000268603 BRDTQ58F21 947 aaPredicted RBP14.25□□□□□ -0.13
CDH11-201ENST00000268603 MRRFQ96E11 262 aaKnown RBP14.25□□□□□ -0.13
CDH11-201ENST00000268603 ATP5J2-PTCD1G3V325 749 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 CIB2O75838 187 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 FCHSD2O94868 740 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 ASIC1P78348 528 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 WTAPQ15007 396 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 STX1AQ16623 288 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 CCDC152Q4G0S7 254 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 ZBTB9Q96C00 473 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 CYP7A1P22680 504 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 NCAPGQ9BPX3 1015 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 FAM114A2Q9NRY5 505 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
CDH11-201ENST00000268603 CYLC1P35663 651 aaPredicted RBP14.25□□□□□ -0.13
CDH11-201ENST00000268603 GNG11P61952 73 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 PPP4R4Q6NUP7 873 aa14.25□□□□□ -0.13
CDH11-201ENST00000268603 ANO3Q9BYT9 981 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
CDH11-201ENST00000268603 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 JARID2Q92833 1246 aaPredicted RBP14.24□□□□□ -0.13
CDH11-201ENST00000268603 SH2B1Q9NRF2 756 aaPredicted RBP14.24□□□□□ -0.13
CDH11-201ENST00000268603 NFE2L2Q16236 605 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 MYOM3Q5VTT5 1437 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 NCOA7Q8NI08 942 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 ANKRD30BQ9BXX2 1392 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 CCDC102BQ68D86 513 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 RPAP2Q8IXW5 612 aaPredicted RBP14.24□□□□□ -0.13
CDH11-201ENST00000268603 NSMCE1Q8WV22 266 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms