RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 EYA2O00167 538 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 PTMAP06454 111 aaKnown RBP12.23□□□□□ -0.45
LSG1-201ENST00000265245 EVA1CP58658 441 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 STK3Q13188 491 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 SEC62Q99442 399 aaKnown RBP12.23□□□□□ -0.45
LSG1-201ENST00000265245 STRN4Q9NRL3 753 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 PAG1Q9NWQ8 432 aa12.23□□□□□ -0.45
LSG1-201ENST00000265245 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 COL5A2P05997 1499 aaPredicted RBP12.22□□□□□ -0.45
LSG1-201ENST00000265245 ARFGEF2Q9Y6D5 1785 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 RRP9O43818 475 aaKnown RBP12.22□□□□□ -0.45
LSG1-201ENST00000265245 CDC37L1Q7L3B6 337 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 SOS2Q07890 1332 aaPredicted RBP12.22□□□□□ -0.45
LSG1-201ENST00000265245 HSP90B1P14625 803 aaKnown RBP12.22□□□□□ -0.45
LSG1-201ENST00000265245 MCM5P33992 734 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 TIMM10P62072 90 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 SLAIN2Q9P270 581 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 GLI3P10071 1580 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 CYP21A2P08686 494 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 HMGB1P09429 215 aaKnown RBP12.22□□□□□ -0.45
LSG1-201ENST00000265245 HELLSQ9NRZ9 838 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
LSG1-201ENST00000265245 LAMB4A4D0S4 1761 aa12.21□□□□□ -0.45
LSG1-201ENST00000265245 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.45
LSG1-201ENST00000265245 AFDNP55196 1824 aaKnown RBP12.21□□□□□ -0.45
LSG1-201ENST00000265245 PALLDQ8WX93 1383 aa12.21□□□□□ -0.45
LSG1-201ENST00000265245 CIAO1O76071 339 aa12.21□□□□□ -0.46
LSG1-201ENST00000265245 GTF3C6Q969F1 213 aa12.21□□□□□ -0.46
LSG1-201ENST00000265245 SCAND2PQ9GZW5 306 aaPredicted RBP12.21□□□□□ -0.46
LSG1-201ENST00000265245 TMOD3Q9NYL9 352 aa12.21□□□□□ -0.46
LSG1-201ENST00000265245 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.46
LSG1-201ENST00000265245 CHGBP05060 677 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
LSG1-201ENST00000265245 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
LSG1-201ENST00000265245 Q6ZUG5 572 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 GOLGA6L4A6NEF3 574 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 ELP1O95163 1332 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 A0A1B0GUL7 405 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
LSG1-201ENST00000265245 LRRC24Q50LG9 513 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 ZNF594Q96JF6 807 aaPredicted RBP12.2□□□□□ -0.46
LSG1-201ENST00000265245 DSCC1Q9BVC3 393 aa12.2□□□□□ -0.46
LSG1-201ENST00000265245 LRRFIP1Q32MZ4 808 aaKnown RBP12.19□□□□□ -0.46
LSG1-201ENST00000265245 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 ZNF500O60304 480 aaPredicted RBP12.19□□□□□ -0.46
LSG1-201ENST00000265245 TCIRG1Q13488 830 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 GIMAP6Q6P9H5 292 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 BRF1Q92994 677 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 TEX13AQ9BXU3 409 aaPredicted RBP12.19□□□□□ -0.46
LSG1-201ENST00000265245 OFD1O75665 1012 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 KIF6Q6ZMV9 814 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 ISCA1Q9BUE6 129 aa12.19□□□□□ -0.46
LSG1-201ENST00000265245 H3BQV1 296 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 CCDC158Q5M9N0 1113 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 DHX32Q7L7V1 743 aaKnown RBP12.18□□□□□ -0.46
LSG1-201ENST00000265245 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 AKAP2Q9Y2D5 859 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 TCHHQ07283 1943 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
LSG1-201ENST00000265245 USP25Q9UHP3 1055 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 RNF113AO15541 343 aaKnown RBP12.18□□□□□ -0.46
LSG1-201ENST00000265245 JAK2O60674 1132 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 KIF3AQ9Y496 699 aa12.18□□□□□ -0.46
LSG1-201ENST00000265245 STARD3NLO95772 234 aa12.17□□□□□ -0.46
LSG1-201ENST00000265245 CCDC192P0DO97 292 aa12.17□□□□□ -0.46
LSG1-201ENST00000265245 TRIM28Q13263 835 aaKnown RBP12.17□□□□□ -0.46
LSG1-201ENST00000265245 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.17□□□□□ -0.46
LSG1-201ENST00000265245 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
LSG1-201ENST00000265245 LLPHQ9BRT6 129 aaKnown RBP12.17□□□□□ -0.46
LSG1-201ENST00000265245 LRRC2Q9BYS8 371 aa12.17□□□□□ -0.46
LSG1-201ENST00000265245 NUP62CLQ9H1M0 184 aa12.17□□□□□ -0.46
LSG1-201ENST00000265245 FAM13BQ9NYF5 915 aa12.17□□□□□ -0.46
LSG1-201ENST00000265245 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
LSG1-201ENST00000265245 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
LSG1-201ENST00000265245 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
LSG1-201ENST00000265245 TTC39AQ5SRH9 613 aa12.17□□□□□ -0.46
LSG1-201ENST00000265245 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
LSG1-201ENST00000265245 STOX1Q6ZVD7 989 aa12.16□□□□□ -0.46
LSG1-201ENST00000265245 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
LSG1-201ENST00000265245 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
LSG1-201ENST00000265245 ZSCAN16Q9H4T2 348 aaPredicted RBP12.16□□□□□ -0.46
LSG1-201ENST00000265245 TFIP11Q9UBB9 837 aaKnown RBP12.16□□□□□ -0.46
LSG1-201ENST00000265245 MAST3O60307 1309 aa12.16□□□□□ -0.46
LSG1-201ENST00000265245 PFKFB2O60825 505 aa12.16□□□□□ -0.46
LSG1-201ENST00000265245 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
LSG1-201ENST00000265245 IFIT5Q13325 482 aaKnown RBP12.16□□□□□ -0.46
LSG1-201ENST00000265245 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
LSG1-201ENST00000265245 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
LSG1-201ENST00000265245 ADCY5O95622 1261 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms