RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CHPF2Q9P2E5 772 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
CASC3-201ENST00000264645 AFMP43652 599 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 TDRD7Q8NHU6 1098 aaKnown RBP17.28■□□□□ 0.36
CASC3-201ENST00000264645 GUCA1BQ9UMX6 200 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 HLTFQ14527 1009 aaKnown RBP eCLIP17.27■□□□□ 0.369e-6■□□□□ 9.4
CASC3-201ENST00000264645 OTUD7BQ6GQQ9 843 aa17.27■□□□□ 0.36
CASC3-201ENST00000264645 GBP6Q6ZN66 633 aa17.27■□□□□ 0.36
CASC3-201ENST00000264645 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
CASC3-201ENST00000264645 NCOA5Q9HCD5 579 aaKnown RBP17.27■□□□□ 0.36
CASC3-201ENST00000264645 LUC7LQ9NQ29 371 aaKnown RBP17.27■□□□□ 0.36
CASC3-201ENST00000264645 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
CASC3-201ENST00000264645 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
CASC3-201ENST00000264645 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.36
CASC3-201ENST00000264645 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.36
CASC3-201ENST00000264645 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.35
CASC3-201ENST00000264645 WASF1Q92558 559 aa17.27■□□□□ 0.35
CASC3-201ENST00000264645 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.35
CASC3-201ENST00000264645 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.35
CASC3-201ENST00000264645 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.35
CASC3-201ENST00000264645 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 GPR161Q8N6U8 529 aaKnown RBP17.26■□□□□ 0.35
CASC3-201ENST00000264645 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
CASC3-201ENST00000264645 ELP1O95163 1332 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 TDO2P48775 406 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 PTH1RQ03431 593 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 ARHGAP6O43182 974 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
CASC3-201ENST00000264645 MAATS1Q7Z4T9 603 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
CASC3-201ENST00000264645 ERLIN2O94905 339 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
CASC3-201ENST00000264645 GBP2P32456 591 aaPredicted RBP17.25■□□□□ 0.35
CASC3-201ENST00000264645 GDAP1L1Q96MZ0 367 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 ALG1Q9BT22 464 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 MYO6Q9UM54 1294 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 SYCP2Q9BX26 1530 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 CCDC57Q2TAC2 916 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 FAM76AQ8TAV0 307 aa17.25■□□□□ 0.35
CASC3-201ENST00000264645 RRP15Q9Y3B9 282 aaKnown RBP17.25■□□□□ 0.35
CASC3-201ENST00000264645 PNMA6AP0CW24 399 aaPredicted RBP17.25■□□□□ 0.35
CASC3-201ENST00000264645 GOLGA8AA7E2F4 631 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 CHL1O00533 1208 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 DDIT3P35638 169 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 ENOX2Q16206 610 aaKnown RBP17.24■□□□□ 0.35
CASC3-201ENST00000264645 MCMDC2Q4G0Z9 681 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 VPS37DQ86XT2 251 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 ST7Q9NRC1 585 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 EFCAB8A8MWE9 144 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 USO1O60763 962 aaKnown RBP17.24■□□□□ 0.35
CASC3-201ENST00000264645 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
CASC3-201ENST00000264645 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 CNNM1Q9NRU3 951 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 HSF2BPO75031 334 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 MTX1Q13505 466 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 GOLGA5Q8TBA6 731 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 TAF4BQ92750 862 aa17.24■□□□□ 0.35
CASC3-201ENST00000264645 METAP2P50579 478 aaKnown RBP eCLIP17.23■□□□□ 0.35
CASC3-201ENST00000264645 SPECC1Q5M775 1068 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 SHANK2Q9UPX8 1470 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 C11orf57Q6ZUT1 292 aaPredicted RBP17.23■□□□□ 0.35
CASC3-201ENST00000264645 PPP1R13BQ96KQ4 1090 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
CASC3-201ENST00000264645 DESI2Q9BSY9 194 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 CCDC113Q9H0I3 377 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 ZCCHC17Q9NP64 241 aaKnown RBP17.23■□□□□ 0.35
CASC3-201ENST00000264645 MORC2Q9Y6X9 1032 aaPredicted RBP17.23■□□□□ 0.35
CASC3-201ENST00000264645 GYS2P54840 703 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 SLC26A6Q9BXS9 759 aa17.23■□□□□ 0.35
CASC3-201ENST00000264645 ZNF202O95125 648 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 ANKRD65E5RJM6 399 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 LARGE1O95461 756 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 INPP5BP32019 993 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 IL13P35225 146 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 CKAP4Q07065 602 aaKnown RBP17.22■□□□□ 0.35
CASC3-201ENST00000264645 UBE3BQ7Z3V4 1068 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 TM6SF1Q9BZW5 370 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 PDE11AQ9HCR9 933 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 TRAPPC8Q9Y2L5 1435 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 AKR1B15C9JRZ8 316 aaPredicted RBP17.22■□□□□ 0.35
CASC3-201ENST00000264645 MYO1CO00159 1063 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 SSBP05455 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
CASC3-201ENST00000264645 TUBBP07437 444 aa17.22■□□□□ 0.35
CASC3-201ENST00000264645 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
CASC3-201ENST00000264645 A0A087WZG4 1122 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 NDUFAB1O14561 156 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 IFIT3O14879 490 aaKnown RBP17.21■□□□□ 0.35
CASC3-201ENST00000264645 ADKP55263 362 aaKnown RBP17.21■□□□□ 0.35
CASC3-201ENST00000264645 E2F4Q16254 413 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 FKBP15Q5T1M5 1219 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms