RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 SPEF2Q9C093 1822 aa25.77■■□□□ 1.72
CKLF-201ENST00000264001 GMPSP49915 693 aaPredicted RBP25.77■■□□□ 1.72
CKLF-201ENST00000264001 USP50Q70EL3 339 aaPredicted RBP25.77■■□□□ 1.72
CKLF-201ENST00000264001 DBNDD1Q9H9R9 158 aa25.77■■□□□ 1.72
CKLF-201ENST00000264001 TMEM88BA6NKF7 163 aa25.76■■□□□ 1.71
CKLF-201ENST00000264001 LINS1Q8NG48 757 aa25.76■■□□□ 1.71
CKLF-201ENST00000264001 CDC5LQ99459 802 aaKnown RBP25.76■■□□□ 1.71
CKLF-201ENST00000264001 BCL2L13Q9BXK5 485 aa25.76■■□□□ 1.71
CKLF-201ENST00000264001 ANKIB1Q9P2G1 1089 aa25.76■■□□□ 1.71
CKLF-201ENST00000264001 UFL1O94874 794 aa25.75■■□□□ 1.71
CKLF-201ENST00000264001 GREM2Q9H772 168 aa25.75■■□□□ 1.71
CKLF-201ENST00000264001 ADARB2Q9NS39 739 aaKnown RBP25.75■■□□□ 1.71
CKLF-201ENST00000264001 RTL9Q8NET4 1388 aa25.74■■□□□ 1.71
CKLF-201ENST00000264001 F6X3S4 739 aa25.74■■□□□ 1.71
CKLF-201ENST00000264001 DOK7Q18PE1 504 aa25.74■■□□□ 1.71
CKLF-201ENST00000264001 PLA2G12BQ9BX93 195 aa25.74■■□□□ 1.71
CKLF-201ENST00000264001 GGA1Q9UJY5 639 aa25.74■■□□□ 1.71
CKLF-201ENST00000264001 ECE2O60344 883 aa25.73■■□□□ 1.71
CKLF-201ENST00000264001 CASP7P55210 303 aa25.73■■□□□ 1.71
CKLF-201ENST00000264001 TNS4Q8IZW8 715 aa25.73■■□□□ 1.71
CKLF-201ENST00000264001 ZC3H12CQ9C0D7 883 aaKnown RBP25.73■■□□□ 1.71
CKLF-201ENST00000264001 XDHP47989 1333 aa25.72■■□□□ 1.71
CKLF-201ENST00000264001 PSMD14O00487 310 aa25.72■■□□□ 1.71
CKLF-201ENST00000264001 SCN9AQ15858 1988 aa25.72■■□□□ 1.71
CKLF-201ENST00000264001 THSD7BQ9C0I4 1608 aa25.71■■□□□ 1.71
CKLF-201ENST00000264001 BEND3Q5T5X7 828 aa25.7■■□□□ 1.7
CKLF-201ENST00000264001 KCNQ5Q9NR82 932 aa25.7■■□□□ 1.7
CKLF-201ENST00000264001 BSDC1Q9NW68 430 aaPredicted RBP25.7■■□□□ 1.7
CKLF-201ENST00000264001 CNOT7Q9UIV1 285 aaKnown RBP25.7■■□□□ 1.7
CKLF-201ENST00000264001 ZBTB12Q9Y330 459 aaPredicted RBP25.7■■□□□ 1.7
CKLF-201ENST00000264001 SHTN1A0MZ66 631 aa25.68■■□□□ 1.7
CKLF-201ENST00000264001 G3V3G9 751 aa25.68■■□□□ 1.7
CKLF-201ENST00000264001 ATP2B4P23634 1241 aa25.68■■□□□ 1.7
CKLF-201ENST00000264001 DCAF8Q5TAQ9 597 aa25.68■■□□□ 1.7
CKLF-201ENST00000264001 DPF2Q92785 391 aa25.68■■□□□ 1.7
CKLF-201ENST00000264001 MINPP1Q9UNW1 487 aa25.68■■□□□ 1.7
CKLF-201ENST00000264001 E9PSI1 815 aa25.67■■□□□ 1.7
CKLF-201ENST00000264001 CSF1RP07333 972 aa25.67■■□□□ 1.7
CKLF-201ENST00000264001 ITGA6P23229 1130 aa25.67■■□□□ 1.7
CKLF-201ENST00000264001 FAM161AQ3B820 660 aa25.67■■□□□ 1.7
CKLF-201ENST00000264001 MICALL2Q8IY33 904 aa25.67■■□□□ 1.7
CKLF-201ENST00000264001 TRPM4Q8TD43 1214 aa25.67■■□□□ 1.7
CKLF-201ENST00000264001 H7C1D1 291 aa25.66■■□□□ 1.7
CKLF-201ENST00000264001 IGHMBP2P38935 993 aaKnown RBP25.66■■□□□ 1.7
CKLF-201ENST00000264001 VEGFBP49765 207 aa25.66■■□□□ 1.7
CKLF-201ENST00000264001 HIRAP54198 1017 aaPredicted RBP25.66■■□□□ 1.7
CKLF-201ENST00000264001 FMR1Q06787 632 aaKnown RBP eCLIP25.66■■□□□ 1.7
CKLF-201ENST00000264001 PSME4Q14997 1843 aa25.65■■□□□ 1.7
CKLF-201ENST00000264001 RASSF10A6NK89 507 aa25.65■■□□□ 1.7
CKLF-201ENST00000264001 CCER2I3L3R5 266 aa25.64■■□□□ 1.7
CKLF-201ENST00000264001 TRAF5O00463 557 aa25.64■■□□□ 1.7
CKLF-201ENST00000264001 RPS12P25398 132 aaKnown RBP25.64■■□□□ 1.7
CKLF-201ENST00000264001 AIDAQ96BJ3 306 aa25.64■■□□□ 1.7
CKLF-201ENST00000264001 PGAP2Q9UHJ9 254 aa25.64■■□□□ 1.7
CKLF-201ENST00000264001 WTIPA6NIX2 430 aaPredicted RBP25.63■■□□□ 1.69
CKLF-201ENST00000264001 VIL1P09327 827 aaKnown RBP25.63■■□□□ 1.69
CKLF-201ENST00000264001 SLFN5Q08AF3 891 aa25.63■■□□□ 1.69
CKLF-201ENST00000264001 ZC3H15Q8WU90 426 aaKnown RBP25.63■■□□□ 1.69
CKLF-201ENST00000264001 ABT1Q9ULW3 272 aaKnown RBP25.63■■□□□ 1.69
CKLF-201ENST00000264001 CCT4P50991 539 aaKnown RBP25.62■■□□□ 1.69
CKLF-201ENST00000264001 FOXO4P98177 505 aa25.62■■□□□ 1.69
CKLF-201ENST00000264001 SLC4A10Q6U841 1118 aa25.62■■□□□ 1.69
CKLF-201ENST00000264001 SAMD7Q7Z3H4 446 aa25.62■■□□□ 1.69
CKLF-201ENST00000264001 MPHOSPH8Q99549 860 aa25.62■■□□□ 1.69
CKLF-201ENST00000264001 MED23Q9ULK4 1368 aa25.61■■□□□ 1.69
CKLF-201ENST00000264001 GRM8O00222 908 aa25.61■■□□□ 1.69
CKLF-201ENST00000264001 FOXN1O15353 648 aa25.61■■□□□ 1.69
CKLF-201ENST00000264001 ALDH1L1O75891 902 aa25.61■■□□□ 1.69
CKLF-201ENST00000264001 DEFB115Q30KQ5 88 aa25.61■■□□□ 1.69
CKLF-201ENST00000264001 MRPL50Q8N5N7 158 aaKnown RBP25.61■■□□□ 1.69
CKLF-201ENST00000264001 POLR2AP24928 1970 aaKnown RBP25.61■■□□□ 1.69
CKLF-201ENST00000264001 ANKRD18BA2A2Z9 1011 aa25.6■■□□□ 1.69
CKLF-201ENST00000264001 CAPN15O75808 1086 aa25.6■■□□□ 1.69
CKLF-201ENST00000264001 GLIS2Q9BZE0 524 aaPredicted RBP25.6■■□□□ 1.69
CKLF-201ENST00000264001 SRCIN1Q9C0H9 1055 aa25.6■■□□□ 1.69
CKLF-201ENST00000264001 C9orf78Q9NZ63 289 aaPredicted RBP25.6■■□□□ 1.69
CKLF-201ENST00000264001 TBC1D10BQ4KMP7 808 aaPredicted RBP25.59■■□□□ 1.69
CKLF-201ENST00000264001 PODNQ7Z5L7 613 aa25.59■■□□□ 1.69
CKLF-201ENST00000264001 CDCA7LQ96GN5 454 aa25.59■■□□□ 1.69
CKLF-201ENST00000264001 LEMD3Q9Y2U8 911 aa25.59■■□□□ 1.69
CKLF-201ENST00000264001 CHMP3Q9Y3E7 222 aa25.59■■□□□ 1.69
CKLF-201ENST00000264001 EGFRP00533 1210 aa25.58■■□□□ 1.69
CKLF-201ENST00000264001 IFIT5Q13325 482 aaKnown RBP25.58■■□□□ 1.69
CKLF-201ENST00000264001 EPHA10Q5JZY3 1008 aa25.58■■□□□ 1.69
CKLF-201ENST00000264001 CST9Q5W186 159 aa25.58■■□□□ 1.69
CKLF-201ENST00000264001 RSBN1LQ6PCB5 846 aaPredicted RBP25.58■■□□□ 1.69
CKLF-201ENST00000264001 ANKRD2Q9GZV1 360 aa25.58■■□□□ 1.69
CKLF-201ENST00000264001 CTCFP49711 727 aaPredicted RBP25.57■■□□□ 1.68
CKLF-201ENST00000264001 RBM26Q5T8P6 1007 aaKnown RBP25.57■■□□□ 1.68
CKLF-201ENST00000264001 LMBR1LQ6UX01 489 aa25.57■■□□□ 1.68
CKLF-201ENST00000264001 SSH1Q8WYL5 1049 aa25.57■■□□□ 1.68
CKLF-201ENST00000264001 WDR33Q9C0J8 1336 aaKnown RBP25.57■■□□□ 1.68
CKLF-201ENST00000264001 ZNF609O15014 1411 aa25.56■■□□□ 1.68
CKLF-201ENST00000264001 CHRNDQ07001 517 aa25.56■■□□□ 1.68
CKLF-201ENST00000264001 CDC37L1Q7L3B6 337 aa25.56■■□□□ 1.68
CKLF-201ENST00000264001 AGBL3Q8NEM8 1001 aa25.56■■□□□ 1.68
CKLF-201ENST00000264001 PRDM10Q9NQV6 1147 aa25.56■■□□□ 1.68
CKLF-201ENST00000264001 ZNF804BA4D1E1 1349 aa25.56■■□□□ 1.68
CKLF-201ENST00000264001 A0A1B0GUL6 1792 aa25.56■■□□□ 1.68
CKLF-201ENST00000264001 USP17L3A6NCW0 530 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms