RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 KIAA0586Q9BVV6 1533 aa13.77□□□□□ -0.21
SMG6-201ENST00000263073 ANKRD18BA2A2Z9 1011 aa13.77□□□□□ -0.21
SMG6-201ENST00000263073 MXRA7P84157 204 aa13.77□□□□□ -0.21
SMG6-201ENST00000263073 IVLP07476 585 aa13.77□□□□□ -0.21
SMG6-201ENST00000263073 CCDC6Q16204 474 aa13.77□□□□□ -0.21
SMG6-201ENST00000263073 LDHAL6AQ6ZMR3 332 aa13.76□□□□□ -0.21
SMG6-201ENST00000263073 RAB34Q9BZG1 259 aa13.76□□□□□ -0.21
SMG6-201ENST00000263073 SNX21Q969T3 373 aa13.76□□□□□ -0.21
SMG6-201ENST00000263073 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
SMG6-201ENST00000263073 IRX3P78415 501 aaPredicted RBP13.76□□□□□ -0.21
SMG6-201ENST00000263073 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
SMG6-201ENST00000263073 KAT14Q9H8E8 782 aa13.76□□□□□ -0.21
SMG6-201ENST00000263073 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
SMG6-201ENST00000263073 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
SMG6-201ENST00000263073 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■■□ 19.7
SMG6-201ENST00000263073 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
SMG6-201ENST00000263073 FAM173BQ6P4H8 233 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 A0A1B0GVL5 298 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 TLDC2A0PJX2 215 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 HGSO14964 777 aaPredicted RBP13.75□□□□□ -0.21
SMG6-201ENST00000263073 STAMBPO95630 424 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
SMG6-201ENST00000263073 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
SMG6-201ENST00000263073 OGFRQ9NZT2 677 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 SAMM50Q9Y512 469 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 LONRF3Q496Y0 759 aa13.75□□□□□ -0.21
SMG6-201ENST00000263073 RNF41Q9H4P4 317 aaPredicted RBP13.75□□□□□ -0.21
SMG6-201ENST00000263073 UBXN1Q04323 297 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 TNIP1Q15025 636 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 FAM114A1Q8IWE2 563 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
SMG6-201ENST00000263073 OTUD6BQ8N6M0 293 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 PPP1R14CQ8TAE6 165 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 AMPD3Q01432 767 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 CCDC121Q6ZUS5 278 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 ZBTB43O43298 467 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 KIF4AO95239 1232 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 WTAPQ15007 396 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 ELF2Q15723 593 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 HMG20BQ9P0W2 317 aa13.74□□□□□ -0.21
SMG6-201ENST00000263073 CYLC1P35663 651 aaPredicted RBP13.74□□□□□ -0.21
SMG6-201ENST00000263073 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
SMG6-201ENST00000263073 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
SMG6-201ENST00000263073 KANK3Q6NY19 840 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 KCNG4Q8TDN1 519 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 STX8Q9UNK0 236 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 SPTLC2O15270 562 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 EVCP57679 992 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 NBPF11Q86T75 865 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 CCDC25Q86WR0 208 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 SPAG5Q96R06 1193 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 CUL5Q93034 780 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
SMG6-201ENST00000263073 ZNF287Q9HBT7 754 aa13.73□□□□□ -0.21
SMG6-201ENST00000263073 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 EHBP1Q8NDI1 1231 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 EBAG9O00559 213 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
SMG6-201ENST00000263073 HPDP32754 393 aaPredicted RBP13.72□□□□□ -0.21
SMG6-201ENST00000263073 ASIC1P78348 528 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 CCDC114Q96M63 670 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 PLEKHA4Q9H4M7 779 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 SLC39A6Q13433 755 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 WDR78Q5VTH9 848 aa13.72□□□□□ -0.21
SMG6-201ENST00000263073 FOXO3O43524 673 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 OPA1O60313 960 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 ANKRD44Q8N8A2 993 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 SLC4A4Q9Y6R1 1079 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 CAMSAP2Q08AD1 1489 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 ABCC5O15440 1437 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 ZKSCAN3Q9BRR0 538 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 CWC25Q9NXE8 425 aaPredicted RBP13.71□□□□□ -0.21
SMG6-201ENST00000263073 MRVI1Q9Y6F6 885 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 COMMD10Q9Y6G5 202 aa13.71□□□□□ -0.21
SMG6-201ENST00000263073 MCM7P33993 719 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 RTN1Q16799 776 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 IFIT1BQ5T764 474 aaKnown RBP13.71□□□□□ -0.22
SMG6-201ENST00000263073 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.22
SMG6-201ENST00000263073 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 CPLX4Q7Z7G2 160 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 PLEKHM2Q8IWE5 1019 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 KCNK9Q9NPC2 374 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 IKBKGQ9Y6K9 419 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 TACC1O75410 805 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 MCMDC2Q4G0Z9 681 aa13.71□□□□□ -0.22
SMG6-201ENST00000263073 THEMISQ8N1K5 641 aaPredicted RBP13.71□□□□□ -0.22
SMG6-201ENST00000263073 USP26Q9BXU7 913 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 713.6 ms