RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 AOC3Q16853 763 aa12□□□□□ -0.49
TTC39A-201ENST00000262675 ATF7IPQ6VMQ6 1270 aa12□□□□□ -0.49
TTC39A-201ENST00000262675 GRAPLQ8TC17 118 aaPredicted RBP12□□□□□ -0.49
TTC39A-201ENST00000262675 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
TTC39A-201ENST00000262675 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
TTC39A-201ENST00000262675 HSP90B1P14625 803 aaKnown RBP11.99□□□□□ -0.49
TTC39A-201ENST00000262675 EXOSC9Q06265 439 aaKnown RBP11.99□□□□□ -0.49
TTC39A-201ENST00000262675 NLRP10Q86W26 655 aa11.99□□□□□ -0.49
TTC39A-201ENST00000262675 LAS1LQ9Y4W2 734 aaKnown RBP11.99□□□□□ -0.49
TTC39A-201ENST00000262675 LRRC37AA6NMS7 1700 aa11.99□□□□□ -0.49
TTC39A-201ENST00000262675 CXCL9Q07325 125 aa11.99□□□□□ -0.49
TTC39A-201ENST00000262675 PAXIP1Q6ZW49 1069 aaPredicted RBP11.99□□□□□ -0.49
TTC39A-201ENST00000262675 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
TTC39A-201ENST00000262675 BCL2L13Q9BXK5 485 aa11.99□□□□□ -0.49
TTC39A-201ENST00000262675 TRMT112Q9UI30 125 aaKnown RBP11.99□□□□□ -0.49
TTC39A-201ENST00000262675 DDX60Q8IY21 1712 aaKnown RBP11.98□□□□□ -0.49
TTC39A-201ENST00000262675 COPS6Q7L5N1 327 aa11.98□□□□□ -0.49
TTC39A-201ENST00000262675 H7C1D1 291 aa11.98□□□□□ -0.49
TTC39A-201ENST00000262675 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
TTC39A-201ENST00000262675 XAGE3Q8WTP9 111 aa11.98□□□□□ -0.49
TTC39A-201ENST00000262675 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
TTC39A-201ENST00000262675 GMPSP49915 693 aaPredicted RBP11.97□□□□□ -0.49
TTC39A-201ENST00000262675 CST9Q5W186 159 aa11.97□□□□□ -0.49
TTC39A-201ENST00000262675 CDC37L1Q7L3B6 337 aa11.97□□□□□ -0.49
TTC39A-201ENST00000262675 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
TTC39A-201ENST00000262675 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
TTC39A-201ENST00000262675 ARHGAP45Q92619 1136 aa11.97□□□□□ -0.49
TTC39A-201ENST00000262675 DPF2Q92785 391 aa11.97□□□□□ -0.49
TTC39A-201ENST00000262675 CHL1O00533 1208 aa11.96□□□□□ -0.49
TTC39A-201ENST00000262675 TRIM27P14373 513 aa11.96□□□□□ -0.49
TTC39A-201ENST00000262675 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.49
TTC39A-201ENST00000262675 ABHD8Q96I13 439 aa11.96□□□□□ -0.49
TTC39A-201ENST00000262675 EYA3Q99504 573 aa11.96□□□□□ -0.49
TTC39A-201ENST00000262675 CELF2O95319 508 aaKnown RBP11.96□□□□□ -0.5
TTC39A-201ENST00000262675 NFKBIBQ15653 356 aa11.96□□□□□ -0.5
TTC39A-201ENST00000262675 SAPCD2Q86UD0 394 aa11.96□□□□□ -0.5
TTC39A-201ENST00000262675 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.5
TTC39A-201ENST00000262675 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.5
TTC39A-201ENST00000262675 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
TTC39A-201ENST00000262675 AIMP1Q12904 312 aaKnown RBP11.95□□□□□ -0.5
TTC39A-201ENST00000262675 SF3B3Q15393 1217 aaKnown RBP11.95□□□□□ -0.5
TTC39A-201ENST00000262675 PROSER3Q2NL68 480 aa11.95□□□□□ -0.5
TTC39A-201ENST00000262675 CYP4F22Q6NT55 531 aa11.95□□□□□ -0.5
TTC39A-201ENST00000262675 HYPKQ9NX55 129 aa11.95□□□□□ -0.5
TTC39A-201ENST00000262675 GNAI1P63096 354 aa11.95□□□□□ -0.5
TTC39A-201ENST00000262675 TRIM28Q13263 835 aaKnown RBP11.95□□□□□ -0.5
TTC39A-201ENST00000262675 ANKRD13DQ6ZTN6 518 aa11.95□□□□□ -0.5
TTC39A-201ENST00000262675 SMC5Q8IY18 1101 aa11.95□□□□□ -0.5
TTC39A-201ENST00000262675 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
TTC39A-201ENST00000262675 TRAF5O00463 557 aa11.94□□□□□ -0.5
TTC39A-201ENST00000262675 NOGQ13253 232 aa11.94□□□□□ -0.5
TTC39A-201ENST00000262675 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
TTC39A-201ENST00000262675 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
TTC39A-201ENST00000262675 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
TTC39A-201ENST00000262675 TBC1D32Q96NH3 1257 aa11.94□□□□□ -0.5
TTC39A-201ENST00000262675 ISCA1Q9BUE6 129 aa11.94□□□□□ -0.5
TTC39A-201ENST00000262675 NOB1Q9ULX3 412 aaKnown RBP11.94□□□□□ -0.5
TTC39A-201ENST00000262675 DUOX1Q9NRD9 1551 aa11.93□□□□□ -0.5
TTC39A-201ENST00000262675 RAD17O75943 681 aa11.93□□□□□ -0.5
TTC39A-201ENST00000262675 ANXA1P04083 346 aa11.93□□□□□ -0.5
TTC39A-201ENST00000262675 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
TTC39A-201ENST00000262675 ZBTB40Q9NUA8 1239 aa11.93□□□□□ -0.5
TTC39A-201ENST00000262675 EIF5BO60841 1220 aaKnown RBP11.92□□□□□ -0.5
TTC39A-201ENST00000262675 GLIS2Q9BZE0 524 aaPredicted RBP11.92□□□□□ -0.5
TTC39A-201ENST00000262675 CHPF2Q9P2E5 772 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 TNNQ9UQP3 1299 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 GRM1Q13255 1194 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 GSE1Q14687 1217 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
TTC39A-201ENST00000262675 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 ZNF609O15014 1411 aa11.92□□□□□ -0.5
TTC39A-201ENST00000262675 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 NSFL1CQ9UNZ2 370 aaKnown RBP11.91□□□□□ -0.5
TTC39A-201ENST00000262675 PCNTO95613 3336 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 YDJCA8MPS7 323 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 ZNF853P0CG23 659 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 RGS19P49795 217 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
TTC39A-201ENST00000262675 C2orf69Q8N8R5 385 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 DCPSQ96C86 337 aaKnown RBP11.91□□□□□ -0.5
TTC39A-201ENST00000262675 SAGE1Q9NXZ1 904 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
TTC39A-201ENST00000262675 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
TTC39A-201ENST00000262675 AOC2O75106 756 aa11.9□□□□□ -0.5
TTC39A-201ENST00000262675 HIRAP54198 1017 aaPredicted RBP11.9□□□□□ -0.5
TTC39A-201ENST00000262675 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
TTC39A-201ENST00000262675 TMEM57Q8N5G2 664 aa11.9□□□□□ -0.5
TTC39A-201ENST00000262675 TRPM4Q8TD43 1214 aa11.9□□□□□ -0.5
TTC39A-201ENST00000262675 GCC1Q96CN9 775 aa11.9□□□□□ -0.5
TTC39A-201ENST00000262675 TAF1P21675 1872 aa11.89□□□□□ -0.51
TTC39A-201ENST00000262675 PSMD14O00487 310 aa11.89□□□□□ -0.51
TTC39A-201ENST00000262675 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
TTC39A-201ENST00000262675 SLC4A3P48751 1232 aa11.89□□□□□ -0.51
TTC39A-201ENST00000262675 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
TTC39A-201ENST00000262675 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
TTC39A-201ENST00000262675 ZNF408Q9H9D4 720 aa11.89□□□□□ -0.51
TTC39A-201ENST00000262675 G3V3G9 751 aa11.89□□□□□ -0.51
TTC39A-201ENST00000262675 ECE2O60344 883 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms