RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 IPO8O15397 1037 aaKnown RBP14.61□□□□□ -0.07
PFDN1-201ENST00000261813 ZKSCAN2Q63HK3 967 aa14.61□□□□□ -0.07
PFDN1-201ENST00000261813 UBE3BQ7Z3V4 1068 aa14.61□□□□□ -0.07
PFDN1-201ENST00000261813 MASTLQ96GX5 879 aa14.61□□□□□ -0.07
PFDN1-201ENST00000261813 NLRP3Q96P20 1036 aa14.61□□□□□ -0.07
PFDN1-201ENST00000261813 MS4A1P11836 297 aa14.6□□□□□ -0.07
PFDN1-201ENST00000261813 STYK1Q6J9G0 422 aa14.6□□□□□ -0.07
PFDN1-201ENST00000261813 ZNF622Q969S3 477 aaKnown RBP eCLIP14.6□□□□□ -0.07
PFDN1-201ENST00000261813 PIM2Q9P1W9 311 aa14.6□□□□□ -0.07
PFDN1-201ENST00000261813 GRM8O00222 908 aa14.6□□□□□ -0.07
PFDN1-201ENST00000261813 NPR1P16066 1061 aa14.6□□□□□ -0.07
PFDN1-201ENST00000261813 PDE8AO60658 829 aa14.59□□□□□ -0.07
PFDN1-201ENST00000261813 HOXA10P31260 410 aaPredicted RBP14.59□□□□□ -0.07
PFDN1-201ENST00000261813 CCT4P50991 539 aaKnown RBP14.59□□□□□ -0.07
PFDN1-201ENST00000261813 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
PFDN1-201ENST00000261813 SF3B3Q15393 1217 aaKnown RBP14.59□□□□□ -0.07
PFDN1-201ENST00000261813 ERICH6BQ5W0A0 696 aa14.59□□□□□ -0.07
PFDN1-201ENST00000261813 TTLL6Q8N841 843 aa14.59□□□□□ -0.07
PFDN1-201ENST00000261813 CLUAP1Q96AJ1 413 aa14.59□□□□□ -0.07
PFDN1-201ENST00000261813 TMEM121BQ9BXQ6 578 aaPredicted RBP14.59□□□□□ -0.07
PFDN1-201ENST00000261813 BCS1LQ9Y276 419 aa14.59□□□□□ -0.07
PFDN1-201ENST00000261813 CEP350Q5VT06 3117 aa14.58□□□□□ -0.07
PFDN1-201ENST00000261813 UTYO14607 1347 aa14.58□□□□□ -0.08
PFDN1-201ENST00000261813 NBPF7P0C2Y1 421 aaPredicted RBP14.58□□□□□ -0.08
PFDN1-201ENST00000261813 DALRD3Q5D0E6 543 aaKnown RBP14.58□□□□□ -0.08
PFDN1-201ENST00000261813 INTS3Q68E01 1043 aaKnown RBP14.58□□□□□ -0.08
PFDN1-201ENST00000261813 ZNF526Q8TF50 670 aaPredicted RBP14.58□□□□□ -0.08
PFDN1-201ENST00000261813 RPGRQ92834 1020 aaKnown RBP14.58□□□□□ -0.08
PFDN1-201ENST00000261813 CNKSR1Q969H4 720 aa14.58□□□□□ -0.08
PFDN1-201ENST00000261813 PLA2G12BQ9BX93 195 aa14.58□□□□□ -0.08
PFDN1-201ENST00000261813 C9orf78Q9NZ63 289 aaPredicted RBP14.58□□□□□ -0.08
PFDN1-201ENST00000261813 COL4A1P02462 1669 aa14.57□□□□□ -0.08
PFDN1-201ENST00000261813 RLBP1P12271 317 aa14.57□□□□□ -0.08
PFDN1-201ENST00000261813 HSP90B1P14625 803 aaKnown RBP14.57□□□□□ -0.08
PFDN1-201ENST00000261813 PRPF40BQ6NWY9 871 aaKnown RBP14.57□□□□□ -0.08
PFDN1-201ENST00000261813 TMEM57Q8N5G2 664 aa14.57□□□□□ -0.08
PFDN1-201ENST00000261813 RBM17Q96I25 401 aaKnown RBP14.57□□□□□ -0.08
PFDN1-201ENST00000261813 USP44Q9H0E7 712 aa14.57□□□□□ -0.08
PFDN1-201ENST00000261813 BOLA1Q9Y3E2 137 aa14.57□□□□□ -0.08
PFDN1-201ENST00000261813 PLIN1O60240 522 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 HSPA6P17066 643 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 CTSWP56202 376 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 TTLL11Q8NHH1 800 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 KAZALD1Q96I82 304 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 SUCLG2Q96I99 432 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 CCDC85AQ96PX6 553 aaPredicted RBP14.56□□□□□ -0.08
PFDN1-201ENST00000261813 CRAMP1Q96RY5 1269 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 SLX4Q8IY92 1834 aa14.56□□□□□ -0.08
PFDN1-201ENST00000261813 CACNA1SQ13698 1873 aa14.55□□□□□ -0.08
PFDN1-201ENST00000261813 ARFGEF1Q9Y6D6 1849 aa14.55□□□□□ -0.08
PFDN1-201ENST00000261813 ALDH1B1P30837 517 aa14.55□□□□□ -0.08
PFDN1-201ENST00000261813 FOXO4P98177 505 aa14.55□□□□□ -0.08
PFDN1-201ENST00000261813 PDE3AQ14432 1141 aa14.55□□□□□ -0.08
PFDN1-201ENST00000261813 EPHA10Q5JZY3 1008 aa14.55□□□□□ -0.08
PFDN1-201ENST00000261813 SLC51AQ86UW1 340 aa14.55□□□□□ -0.08
PFDN1-201ENST00000261813 DZIP1LQ8IYY4 767 aaKnown RBP14.55□□□□□ -0.08
PFDN1-201ENST00000261813 CSF1RP07333 972 aa14.54□□□□□ -0.08
PFDN1-201ENST00000261813 CCDC152Q4G0S7 254 aa14.54□□□□□ -0.08
PFDN1-201ENST00000261813 DDX46Q7L014 1031 aaKnown RBP14.54□□□□□ -0.08
PFDN1-201ENST00000261813 FTSJ3Q8IY81 847 aaKnown RBP14.54□□□□□ -0.08
PFDN1-201ENST00000261813 C7orf43Q8WVR3 580 aa14.54□□□□□ -0.08
PFDN1-201ENST00000261813 CELF1Q92879 486 aaKnown RBP14.54□□□□□ -0.08
PFDN1-201ENST00000261813 MEIS3Q99687 375 aa14.54□□□□□ -0.08
PFDN1-201ENST00000261813 SEC31BQ9NQW1 1179 aa14.54□□□□□ -0.08
PFDN1-201ENST00000261813 MYH3P11055 1940 aa14.53□□□□□ -0.08
PFDN1-201ENST00000261813 C21orf2O43822 256 aa14.53□□□□□ -0.08
PFDN1-201ENST00000261813 GRAPQ13588 217 aa14.53□□□□□ -0.08
PFDN1-201ENST00000261813 GRAPLQ8TC17 118 aaPredicted RBP14.53□□□□□ -0.08
PFDN1-201ENST00000261813 PANK1Q8TE04 598 aa14.53□□□□□ -0.08
PFDN1-201ENST00000261813 GREM2Q9H772 168 aa14.53□□□□□ -0.08
PFDN1-201ENST00000261813 RTL9Q8NET4 1388 aa14.52□□□□□ -0.08
PFDN1-201ENST00000261813 TAF1P21675 1872 aa14.52□□□□□ -0.08
PFDN1-201ENST00000261813 PPEF1O14829 653 aaPredicted RBP14.52□□□□□ -0.08
PFDN1-201ENST00000261813 FAM161AQ3B820 660 aa14.52□□□□□ -0.08
PFDN1-201ENST00000261813 OLFM4Q6UX06 510 aa14.52□□□□□ -0.08
PFDN1-201ENST00000261813 UBTFL1P0CB47 393 aaPredicted RBP14.51□□□□□ -0.09
PFDN1-201ENST00000261813 C20orf194Q5TEA3 1177 aa14.51□□□□□ -0.09
PFDN1-201ENST00000261813 LMBR1LQ6UX01 489 aa14.51□□□□□ -0.09
PFDN1-201ENST00000261813 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
PFDN1-201ENST00000261813 ANKRD44Q8N8A2 993 aa14.51□□□□□ -0.09
PFDN1-201ENST00000261813 BICC1Q9H694 974 aaKnown RBP14.51□□□□□ -0.09
PFDN1-201ENST00000261813 SNED1Q8TER0 1413 aa14.51□□□□□ -0.09
PFDN1-201ENST00000261813 BBOX1O75936 387 aa14.5□□□□□ -0.09
PFDN1-201ENST00000261813 RABL6Q3YEC7 729 aaPredicted RBP14.5□□□□□ -0.09
PFDN1-201ENST00000261813 CHMP4BQ9H444 224 aaKnown RBP14.5□□□□□ -0.09
PFDN1-201ENST00000261813 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
PFDN1-201ENST00000261813 ITGA6P23229 1130 aa14.49□□□□□ -0.09
PFDN1-201ENST00000261813 RPS8P62241 208 aaKnown RBP14.49□□□□□ -0.09
PFDN1-201ENST00000261813 AAMPQ13685 434 aa14.49□□□□□ -0.09
PFDN1-201ENST00000261813 ARHGAP27Q6ZUM4 889 aa14.49□□□□□ -0.09
PFDN1-201ENST00000261813 MICALL2Q8IY33 904 aa14.49□□□□□ -0.09
PFDN1-201ENST00000261813 ATP6V0A2Q9Y487 856 aa14.49□□□□□ -0.09
PFDN1-201ENST00000261813 GTF3C3Q9Y5Q9 886 aa14.49□□□□□ -0.09
PFDN1-201ENST00000261813 NFKBIEO00221 500 aa14.48□□□□□ -0.09
PFDN1-201ENST00000261813 ZBTB7BO15156 539 aaPredicted RBP14.48□□□□□ -0.09
PFDN1-201ENST00000261813 GNAI3P08754 354 aa14.48□□□□□ -0.09
PFDN1-201ENST00000261813 CCDC93Q567U6 631 aa14.48□□□□□ -0.09
PFDN1-201ENST00000261813 COG6Q9Y2V7 657 aa14.48□□□□□ -0.09
PFDN1-201ENST00000261813 CHMP3Q9Y3E7 222 aa14.48□□□□□ -0.09
PFDN1-201ENST00000261813 LRRFIP2Q9Y608 721 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms