RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 KIF4AO95239 1232 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CCDC174Q6PII3 467 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 ARMC9Q7Z3E5 817 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CCHCR1Q8TD31 782 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 MRPS27Q92552 414 aaKnown RBP9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 RABGGTAQ92696 567 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CFAP57Q96MR6 1250 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 SH3GL3Q99963 347 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CNPY2Q9Y2B0 182 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 STAMBPO95630 424 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 DBN1Q16643 649 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 ACTR5Q9H9F9 607 aaPredicted RBP9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 U3KPZ7 1027 aaPredicted RBP9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CNGA4Q8IV77 575 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 MRFAP1L1Q96HT8 127 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 MYO1CO00159 1063 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 TRIM27P14373 513 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 IBSPP21815 317 aaPredicted RBP9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CCDC102BQ68D86 513 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 RUFY4Q6ZNE9 571 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 DTNBP1Q96EV8 351 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 CLSTN2Q9H4D0 955 aa9.5□□□□□ -0.89
SNCAIP-201ENST00000261367 LMTK2Q8IWU2 1503 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 BLMP54132 1417 aaPredicted RBP9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 ASXL2Q76L83 1435 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 SETDB1Q15047 1291 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 ZSCAN25Q6NSZ9 544 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 GBP7Q8N8V2 638 aaPredicted RBP9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 DACT1Q9NYF0 836 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 SSH1Q8WYL5 1049 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 NAPGQ99747 312 aaPredicted RBP9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 TTC41PQ6P2S7 1318 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 ZNF518AQ6AHZ1 1483 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 ATP5DP30049 168 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 FOSBP53539 338 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 CNNM3Q8NE01 707 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 DNAJC25Q9H1X3 360 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 VCX3BQ9H321 246 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 VCX3AQ9NNX9 186 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 RMND1Q9NWS8 449 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 KIF1BO60333 1816 aa9.49□□□□□ -0.89
SNCAIP-201ENST00000261367 BMP15O95972 392 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 CETN2P41208 172 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 HLTFQ14527 1009 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 RASAL2Q9UJF2 1139 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 TRAK1Q9UPV9 953 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 TMPOP42166 694 aaKnown RBP9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 HNRNPH2P55795 449 aaKnown RBP9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 PDLIM2Q96JY6 352 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 CEP63Q96MT8 703 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 SELENOOQ9BVL4 669 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 PHLPP2Q6ZVD8 1323 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 PCK1P35558 622 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 AMPHP49418 695 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 TMX1Q9H3N1 280 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 PIK3C2BO00750 1634 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 PPP2R5AQ15172 486 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 CAPN7Q9Y6W3 813 aa9.48□□□□□ -0.89
SNCAIP-201ENST00000261367 PRPHP41219 470 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 AOPEPQ8N6M6 819 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 BAG1Q99933 345 aaPredicted RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 GDPD2Q9HCC8 539 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 JADE2Q9NQC1 790 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 SPTLC3Q9NUV7 552 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 ODF2LQ9ULJ1 636 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 GOLGA6BA6NDN3 693 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 CHUKO15111 745 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 DYNC1I2Q13409 638 aaKnown RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 C8orf76Q96K31 380 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 RAB3IPQ96QF0 476 aaPredicted RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 USP26Q9BXU7 913 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 RICTORQ6R327 1708 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 LRRD1A4D1F6 860 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 MUM1L1Q5H9M0 696 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 TBC1D31Q96DN5 1066 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 ESYT1Q9BSJ8 1104 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 CWC25Q9NXE8 425 aaPredicted RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 PCDHB15Q9Y5E8 787 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 CFAP65Q6ZU64 1925 aaKnown RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 WDHD1O75717 1129 aaPredicted RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 TNNC1P63316 161 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 MTMR3Q13615 1198 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 NFE2L2Q16236 605 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 LRRC23Q53EV4 343 aaPredicted RBP9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 CEP128Q6ZU80 1094 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 NEK11Q8NG66 645 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 CDK5RAP3Q96JB5 506 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 SYNMO15061 1565 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 ADGRB3O60242 1522 aa9.47□□□□□ -0.89
SNCAIP-201ENST00000261367 ALDH3A1P30838 453 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms