RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 VPS36Q86VN1 386 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 CFAP43Q8NDM7 1665 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 AKR1B10O60218 316 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 PIP4K2BP78356 416 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 KLF18A0A0U1RQI7 1052 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 METAP2P50579 478 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 ZBTB3Q9H5J0 574 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 AFAP1L1Q8TED9 768 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 IFT81Q8WYA0 676 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 CCDC196A0A1B0GTZ2 297 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 TMEM67Q5HYA8 995 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 CPLX4Q7Z7G2 160 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 CPSF2Q9P2I0 782 aaKnown RBP11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 GADD45BO75293 160 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 DMTNQ08495 405 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 BICDL1Q6ZP65 573 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 NEK11Q8NG66 645 aa11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 INTS4Q96HW7 963 aaKnown RBP11.12□□□□□ -0.63
CTDSPL2-201ENST00000260327 RTL1A6NKG5 1358 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 RRAGBQ5VZM2 374 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 ANKS4BQ8N8V4 417 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 ACEP12821 1306 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 FOXO3O43524 673 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 KIF4AO95239 1232 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 TAOK3Q9H2K8 898 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 LMBRD1Q9NUN5 540 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 TTC21BQ7Z4L5 1316 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 INPP5BP32019 993 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 ZNF445P59923 1031 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 PRDM11Q9NQV5 511 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 IGHMBP2P38935 993 aaKnown RBP11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 FAM173BQ6P4H8 233 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 NSRP1Q9H0G5 558 aaKnown RBP11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.11□□□□□ -0.634e-7■□□□□ 11.2
CTDSPL2-201ENST00000260327 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 A0A1B0GUA9 196 aa11.11□□□□□ -0.63
CTDSPL2-201ENST00000260327 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 NLRP5P59047 1200 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 CREB3L3Q68CJ9 461 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 CEP83Q9Y592 693 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 MSH6P52701 1360 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 TUBB4AP04350 444 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 CCDC40Q4G0X9 1142 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 C6orf163Q5TEZ5 329 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 NUP160Q12769 1436 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 STX17P56962 302 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 EIF4A2Q14240 407 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 ZSCAN26Q16670 478 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 CCDC129Q6ZRS4 1044 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 MAP3K12Q12852 859 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 COL17A1Q9UMD9 1497 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 CYLC1P35663 651 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 CCDC155Q8N6L0 562 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 CTCFLQ8NI51 663 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL2-201ENST00000260327 GPTP24298 496 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 KIF5BP33176 963 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 MAP2K2P36507 400 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 TMEM63CQ9P1W3 806 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 IDEP14735 1019 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 HPDP32754 393 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 PHAXQ9H814 394 aaKnown RBP11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 NDUFAB1O14561 156 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 NEBLO76041 1014 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 APOBRQ0VD83 1088 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 TCERG1LQ5VWI1 586 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 KCNG4Q8TDN1 519 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 AMOTL2Q9Y2J4 779 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 PZPP20742 1482 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 PPP1R12BO60237 982 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 ARID4AP29374 1257 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 MXRA7P84157 204 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 SLC4A8Q2Y0W8 1093 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 G2E3Q7L622 706 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 CETN2P41208 172 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 KIAA0753Q2KHM9 967 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 MCMDC2Q4G0Z9 681 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 GAS2L3Q86XJ1 694 aa11.09□□□□□ -0.63
CTDSPL2-201ENST00000260327 TLDC2A0PJX2 215 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 FGFR1OPO95684 399 aaKnown RBP11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 SPATA24Q86W54 205 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 HOOK3Q86VS8 718 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
CTDSPL2-201ENST00000260327 BANK1Q8NDB2 785 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms