RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HSP90AB4PQ58FF6 505 aa19.57■□□□□ 0.72
CCDC90B-201ENST00000260054 CENPQQ7L2Z9 268 aaPredicted RBP19.57■□□□□ 0.72
CCDC90B-201ENST00000260054 CNKSR1Q969H4 720 aa19.57■□□□□ 0.72
CCDC90B-201ENST00000260054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.57■□□□□ 0.72
CCDC90B-201ENST00000260054 BBOX1O75936 387 aa19.56■□□□□ 0.72
CCDC90B-201ENST00000260054 IL15P40933 162 aaPredicted RBP19.56■□□□□ 0.72
CCDC90B-201ENST00000260054 PRPF40BQ6NWY9 871 aaKnown RBP19.56■□□□□ 0.72
CCDC90B-201ENST00000260054 PPEF1O14829 653 aaPredicted RBP19.56■□□□□ 0.72
CCDC90B-201ENST00000260054 RAB11FIP3O75154 756 aa19.56■□□□□ 0.72
CCDC90B-201ENST00000260054 MINPP1Q9UNW1 487 aa19.56■□□□□ 0.72
CCDC90B-201ENST00000260054 GOLGB1Q14789 3259 aaKnown RBP19.55■□□□□ 0.72
CCDC90B-201ENST00000260054 SLX4Q8IY92 1834 aa19.55■□□□□ 0.72
CCDC90B-201ENST00000260054 RHPN1Q8TCX5 695 aa19.55■□□□□ 0.72
CCDC90B-201ENST00000260054 CHRNDQ07001 517 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 TFCP2Q12800 502 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 CACNA1SQ13698 1873 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 ERC1Q8IUD2 1116 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 TTLL6Q8N841 843 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 KIF1BPQ96EK5 621 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 WWC3Q9ULE0 1092 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
CCDC90B-201ENST00000260054 METTL24Q5JXM2 366 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 ANKRD45Q5TZF3 282 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 OLFM4Q6UX06 510 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 TMC4Q7Z404 712 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 VGLL2Q8N8G2 317 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 HELBQ8NG08 1087 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 LRRCC1Q9C099 1032 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 PIM2Q9P1W9 311 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 ATP6V0A2Q9Y487 856 aa19.53■□□□□ 0.72
CCDC90B-201ENST00000260054 SMARCA5O60264 1052 aaPredicted RBP19.52■□□□□ 0.72
CCDC90B-201ENST00000260054 IL1RAPL2Q9NP60 686 aa19.52■□□□□ 0.72
CCDC90B-201ENST00000260054 BRCA1P38398 1863 aaKnown RBP19.52■□□□□ 0.72
CCDC90B-201ENST00000260054 LRRC37AA6NMS7 1700 aa19.52■□□□□ 0.71
CCDC90B-201ENST00000260054 TAF5LO75529 589 aa19.52■□□□□ 0.71
CCDC90B-201ENST00000260054 NUCB1Q02818 461 aa19.52■□□□□ 0.71
CCDC90B-201ENST00000260054 SP8Q8IXZ3 490 aa19.52■□□□□ 0.71
CCDC90B-201ENST00000260054 C7orf43Q8WVR3 580 aa19.52■□□□□ 0.71
CCDC90B-201ENST00000260054 CEP126Q9P2H0 1117 aa19.52■□□□□ 0.71
CCDC90B-201ENST00000260054 A0A1B0GUL6 1792 aa19.5■□□□□ 0.71
CCDC90B-201ENST00000260054 PDE8BO95263 885 aa19.5■□□□□ 0.71
CCDC90B-201ENST00000260054 BCL11AQ9H165 835 aa19.5■□□□□ 0.71
CCDC90B-201ENST00000260054 ZNF219Q9P2Y4 722 aaPredicted RBP19.5■□□□□ 0.71
CCDC90B-201ENST00000260054 SNAP23O00161 211 aa19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 GPSM2P81274 684 aa19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 DALRD3Q5D0E6 543 aaKnown RBP19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 WTIPA6NIX2 430 aaPredicted RBP19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 C21orf2O43822 256 aa19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 CHD1LQ86WJ1 897 aa19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 LNPKQ9C0E8 428 aa19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 ANKRD2Q9GZV1 360 aa19.49■□□□□ 0.71
CCDC90B-201ENST00000260054 TNNI3KQ59H18 835 aa19.48■□□□□ 0.71
CCDC90B-201ENST00000260054 EAF2Q96CJ1 260 aaPredicted RBP19.48■□□□□ 0.71
CCDC90B-201ENST00000260054 ANKIB1Q9P2G1 1089 aa19.48■□□□□ 0.71
CCDC90B-201ENST00000260054 NSFL1CQ9UNZ2 370 aaKnown RBP19.48■□□□□ 0.71
CCDC90B-201ENST00000260054 FPGT-TNNI3KV9GXZ4 949 aa19.48■□□□□ 0.71
CCDC90B-201ENST00000260054 XDHP47989 1333 aa19.48■□□□□ 0.71
CCDC90B-201ENST00000260054 ZNF609O15014 1411 aa19.47■□□□□ 0.71
CCDC90B-201ENST00000260054 SNED1Q8TER0 1413 aa19.47■□□□□ 0.71
CCDC90B-201ENST00000260054 CLASRPQ8N2M8 674 aaKnown RBP19.47■□□□□ 0.71
CCDC90B-201ENST00000260054 GPR108Q9NPR9 543 aa19.47■□□□□ 0.71
CCDC90B-201ENST00000260054 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
CCDC90B-201ENST00000260054 BCS1LQ9Y276 419 aa19.47■□□□□ 0.71
CCDC90B-201ENST00000260054 LTBP1Q14766 1721 aa19.47■□□□□ 0.71
CCDC90B-201ENST00000260054 A0A1B0GUL7 405 aa19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 FGFR2P21802 821 aa19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 PUM3Q15397 648 aaKnown RBP19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 ATP2B3Q16720 1220 aa19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 SKAP1Q86WV1 359 aa19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 ZBTB47Q9UFB7 747 aaPredicted RBP19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 TIMM10P62072 90 aa19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 AACSQ86V21 672 aa19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 TLR7Q9NYK1 1049 aaKnown RBP19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 AKAP2Q9Y2D5 859 aa19.46■□□□□ 0.71
CCDC90B-201ENST00000260054 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
CCDC90B-201ENST00000260054 MPNDQ8N594 471 aa19.45■□□□□ 0.7
CCDC90B-201ENST00000260054 OTUD7AQ8TE49 926 aaPredicted RBP19.45■□□□□ 0.7
CCDC90B-201ENST00000260054 CCDC8Q9H0W5 538 aaPredicted RBP19.45■□□□□ 0.7
CCDC90B-201ENST00000260054 DUOX1Q9NRD9 1551 aa19.45■□□□□ 0.7
CCDC90B-201ENST00000260054 PDE4AP27815 886 aa19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 UBE4AQ14139 1066 aa19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 DPP8Q6V1X1 898 aaPredicted RBP19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 LPIN2Q92539 896 aa19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 POLLQ9UGP5 575 aa19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 LEMD3Q9Y2U8 911 aa19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
CCDC90B-201ENST00000260054 UFL1O94874 794 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 ATP2B4P23634 1241 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 KCNJ4P48050 445 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 CCDC93Q567U6 631 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 NEUROD6Q96NK8 337 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 DBNLQ9UJU6 430 aaKnown RBP19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 KLRK1P26718 216 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 ADORA1P30542 326 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 GPR101Q96P66 508 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms