RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 LRRC24Q50LG9 513 aa19.25■□□□□ 0.67
GYPC-201ENST00000259254 CHD1LQ86WJ1 897 aa19.25■□□□□ 0.67
GYPC-201ENST00000259254 CELF1Q92879 486 aaKnown RBP19.25■□□□□ 0.67
GYPC-201ENST00000259254 LNPKQ9C0E8 428 aa19.25■□□□□ 0.67
GYPC-201ENST00000259254 PIM2Q9P1W9 311 aa19.25■□□□□ 0.67
GYPC-201ENST00000259254 FBXO3Q9UK99 471 aa19.25■□□□□ 0.67
GYPC-201ENST00000259254 KLRG2A4D1S0 409 aaPredicted RBP19.24■□□□□ 0.67
GYPC-201ENST00000259254 H0YIN7 160 aa19.24■□□□□ 0.67
GYPC-201ENST00000259254 NPR1P16066 1061 aa19.24■□□□□ 0.67
GYPC-201ENST00000259254 GRAPQ13588 217 aa19.24■□□□□ 0.67
GYPC-201ENST00000259254 GRAPLQ8TC17 118 aaPredicted RBP19.24■□□□□ 0.67
GYPC-201ENST00000259254 IL1RAPL2Q9NP60 686 aa19.24■□□□□ 0.67
GYPC-201ENST00000259254 CHRNA5P30532 468 aa19.23■□□□□ 0.67
GYPC-201ENST00000259254 RPS8P62241 208 aaKnown RBP19.23■□□□□ 0.67
GYPC-201ENST00000259254 TFCP2Q12800 502 aa19.23■□□□□ 0.67
GYPC-201ENST00000259254 METTL24Q5JXM2 366 aa19.23■□□□□ 0.67
GYPC-201ENST00000259254 ATG9AQ7Z3C6 839 aa19.23■□□□□ 0.67
GYPC-201ENST00000259254 ZNF622Q969S3 477 aaKnown RBP eCLIP19.23■□□□□ 0.67
GYPC-201ENST00000259254 SASH1O94885 1247 aa19.22■□□□□ 0.67
GYPC-201ENST00000259254 SRGNP10124 158 aa19.22■□□□□ 0.67
GYPC-201ENST00000259254 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
GYPC-201ENST00000259254 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
GYPC-201ENST00000259254 CRAMP1Q96RY5 1269 aa19.22■□□□□ 0.67
GYPC-201ENST00000259254 CEP126Q9P2H0 1117 aa19.22■□□□□ 0.67
GYPC-201ENST00000259254 COL11A2P13942 1736 aaPredicted RBP19.22■□□□□ 0.67
GYPC-201ENST00000259254 DALRD3Q5D0E6 543 aaKnown RBP19.21■□□□□ 0.67
GYPC-201ENST00000259254 SKAP1Q86WV1 359 aa19.21■□□□□ 0.67
GYPC-201ENST00000259254 CLASRPQ8N2M8 674 aaKnown RBP19.21■□□□□ 0.67
GYPC-201ENST00000259254 RGS3P49796 1198 aa19.2■□□□□ 0.66
GYPC-201ENST00000259254 ARHGAP27Q6ZUM4 889 aa19.2■□□□□ 0.66
GYPC-201ENST00000259254 BSDC1Q9NW68 430 aaPredicted RBP19.2■□□□□ 0.66
GYPC-201ENST00000259254 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
GYPC-201ENST00000259254 MROH5Q6ZUA9 1318 aa19.2■□□□□ 0.66
GYPC-201ENST00000259254 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
GYPC-201ENST00000259254 STYK1Q6J9G0 422 aa19.19■□□□□ 0.66
GYPC-201ENST00000259254 SBF1O95248 1867 aa19.19■□□□□ 0.66
GYPC-201ENST00000259254 PPEF1O14829 653 aaPredicted RBP19.18■□□□□ 0.66
GYPC-201ENST00000259254 BBOX1O75936 387 aa19.18■□□□□ 0.66
GYPC-201ENST00000259254 IFIT2P09913 472 aaKnown RBP19.18■□□□□ 0.66
GYPC-201ENST00000259254 AACSQ86V21 672 aa19.18■□□□□ 0.66
GYPC-201ENST00000259254 C16orf71Q8IYS4 520 aaPredicted RBP19.18■□□□□ 0.66
GYPC-201ENST00000259254 HELBQ8NG08 1087 aaPredicted RBP19.18■□□□□ 0.66
GYPC-201ENST00000259254 MYH3P11055 1940 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 PDE4AP27815 886 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 CHRNDQ07001 517 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 TNNI3KQ59H18 835 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 CNKSR1Q969H4 720 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 TMX4Q9H1E5 349 aaPredicted RBP19.17■□□□□ 0.66
GYPC-201ENST00000259254 MINPP1Q9UNW1 487 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 AKAP2Q9Y2D5 859 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 FPGT-TNNI3KV9GXZ4 949 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 CACNA1SQ13698 1873 aa19.17■□□□□ 0.66
GYPC-201ENST00000259254 C1QTNF8P60827 252 aa19.16■□□□□ 0.66
GYPC-201ENST00000259254 TMC4Q7Z404 712 aa19.16■□□□□ 0.66
GYPC-201ENST00000259254 NEUROD6Q96NK8 337 aa19.16■□□□□ 0.66
GYPC-201ENST00000259254 ANKRD2Q9GZV1 360 aa19.16■□□□□ 0.66
GYPC-201ENST00000259254 CCDC8Q9H0W5 538 aaPredicted RBP19.16■□□□□ 0.66
GYPC-201ENST00000259254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.16■□□□□ 0.66
GYPC-201ENST00000259254 COL4A1P02462 1669 aa19.15■□□□□ 0.66
GYPC-201ENST00000259254 TAF5LO75529 589 aa19.15■□□□□ 0.66
GYPC-201ENST00000259254 PDE8BO95263 885 aa19.15■□□□□ 0.66
GYPC-201ENST00000259254 ATP2B3Q16720 1220 aa19.15■□□□□ 0.66
GYPC-201ENST00000259254 OTUD7AQ8TE49 926 aaPredicted RBP19.15■□□□□ 0.66
GYPC-201ENST00000259254 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
GYPC-201ENST00000259254 GPBP1L1Q9HC44 474 aaPredicted RBP19.15■□□□□ 0.66
GYPC-201ENST00000259254 GPR108Q9NPR9 543 aa19.15■□□□□ 0.66
GYPC-201ENST00000259254 KCNJ4P48050 445 aa19.14■□□□□ 0.65
GYPC-201ENST00000259254 PUM3Q15397 648 aaKnown RBP19.14■□□□□ 0.65
GYPC-201ENST00000259254 PRPF40BQ6NWY9 871 aaKnown RBP19.14■□□□□ 0.65
GYPC-201ENST00000259254 ZNF526Q8TF50 670 aaPredicted RBP19.14■□□□□ 0.65
GYPC-201ENST00000259254 ANKIB1Q9P2G1 1089 aa19.14■□□□□ 0.65
GYPC-201ENST00000259254 A0A1B0GUL7 405 aa19.13■□□□□ 0.65
GYPC-201ENST00000259254 TTLL6Q8N841 843 aa19.13■□□□□ 0.65
GYPC-201ENST00000259254 VGLL2Q8N8G2 317 aa19.13■□□□□ 0.65
GYPC-201ENST00000259254 GPATCH3Q96I76 525 aa19.13■□□□□ 0.65
GYPC-201ENST00000259254 ZNF219Q9P2Y4 722 aaPredicted RBP19.13■□□□□ 0.65
GYPC-201ENST00000259254 CCDC88AQ3V6T2 1871 aa19.13■□□□□ 0.65
GYPC-201ENST00000259254 ZNF609O15014 1411 aa19.12■□□□□ 0.65
GYPC-201ENST00000259254 SLC5A1P13866 664 aa19.12■□□□□ 0.65
GYPC-201ENST00000259254 MX1P20591 662 aa19.12■□□□□ 0.65
GYPC-201ENST00000259254 TIMM10P62072 90 aa19.12■□□□□ 0.65
GYPC-201ENST00000259254 GORABQ5T7V8 394 aa19.12■□□□□ 0.65
GYPC-201ENST00000259254 SP8Q8IXZ3 490 aa19.12■□□□□ 0.65
GYPC-201ENST00000259254 TLR7Q9NYK1 1049 aaKnown RBP19.12■□□□□ 0.65
GYPC-201ENST00000259254 ATP6V0A2Q9Y487 856 aa19.12■□□□□ 0.65
GYPC-201ENST00000259254 IFIT1P09914 478 aaKnown RBP19.11■□□□□ 0.65
GYPC-201ENST00000259254 GPSM2P81274 684 aa19.11■□□□□ 0.65
GYPC-201ENST00000259254 SLC51AQ86UW1 340 aa19.11■□□□□ 0.65
GYPC-201ENST00000259254 PLEKHM2Q8IWE5 1019 aa19.11■□□□□ 0.65
GYPC-201ENST00000259254 LPIN2Q92539 896 aa19.11■□□□□ 0.65
GYPC-201ENST00000259254 DBNDD2Q9BQY9 259 aa19.11■□□□□ 0.65
GYPC-201ENST00000259254 NSFL1CQ9UNZ2 370 aaKnown RBP19.11■□□□□ 0.65
GYPC-201ENST00000259254 FER1L6Q2WGJ9 1857 aa19.1■□□□□ 0.65
GYPC-201ENST00000259254 XDHP47989 1333 aa19.1■□□□□ 0.65
GYPC-201ENST00000259254 SNAP23O00161 211 aa19.1■□□□□ 0.65
GYPC-201ENST00000259254 C9orf131Q5VYM1 1079 aa19.1■□□□□ 0.65
GYPC-201ENST00000259254 DBNLQ9UJU6 430 aaKnown RBP19.1■□□□□ 0.65
GYPC-201ENST00000259254 SLX4Q8IY92 1834 aa19.09■□□□□ 0.65
GYPC-201ENST00000259254 TIAM2Q8IVF5 1701 aa19.09■□□□□ 0.65
GYPC-201ENST00000259254 ADORA1P30542 326 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms