RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 DNAI1Q9UI46 699 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 SNW1Q13573 536 aaKnown RBP13.64□□□□□ -0.23
VRTN-201ENST00000256362 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 TMC6Q7Z403 805 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 PDILTQ8N807 584 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
VRTN-201ENST00000256362 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
VRTN-201ENST00000256362 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
VRTN-201ENST00000256362 KSR2Q6VAB6 950 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 ZSCAN31Q96LW9 406 aaPredicted RBP13.63□□□□□ -0.23
VRTN-201ENST00000256362 KINO60870 393 aaKnown RBP13.63□□□□□ -0.23
VRTN-201ENST00000256362 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
VRTN-201ENST00000256362 SLU7O95391 586 aaKnown RBP13.63□□□□□ -0.23
VRTN-201ENST00000256362 TMCO3Q6UWJ1 677 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
VRTN-201ENST00000256362 LMAN1P49257 510 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 PLEKHO1Q53GL0 409 aaPredicted RBP13.63□□□□□ -0.23
VRTN-201ENST00000256362 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 BRF1Q92994 677 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 FUCA2Q9BTY2 467 aa13.63□□□□□ -0.23
VRTN-201ENST00000256362 NEUROD6Q96NK8 337 aa13.62□□□□□ -0.23
VRTN-201ENST00000256362 ANKRD65E5RJM6 399 aa13.62□□□□□ -0.23
VRTN-201ENST00000256362 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
VRTN-201ENST00000256362 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
VRTN-201ENST00000256362 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
VRTN-201ENST00000256362 IP6K1Q92551 441 aa13.62□□□□□ -0.23
VRTN-201ENST00000256362 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
VRTN-201ENST00000256362 RGPD1P0DJD0 1748 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 PSMA5P28066 241 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 TOB2Q14106 344 aaPredicted RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 MAP4K1Q92918 833 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 ORAI2Q96SN7 254 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 A0A0G2JLW4 131 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 Q6ZUG5 572 aa13.61□□□□□ -0.23
VRTN-201ENST00000256362 IPO4Q8TEX9 1081 aaKnown RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 LEO1Q8WVC0 666 aaPredicted RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 ARGLU1Q9NWB6 273 aaPredicted RBP13.61□□□□□ -0.23
VRTN-201ENST00000256362 TFCP2Q12800 502 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 BMS1Q14692 1282 aaKnown RBP13.6□□□□□ -0.23
VRTN-201ENST00000256362 ERC1Q8IUD2 1116 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 RPS6KB1P23443 525 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 NLRP2Q9NX02 1062 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 RSPH14Q9UHP6 348 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
VRTN-201ENST00000256362 CCDC191Q8NCU4 936 aa13.6□□□□□ -0.23
VRTN-201ENST00000256362 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
VRTN-201ENST00000256362 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 C11orf57Q6ZUT1 292 aaPredicted RBP13.59□□□□□ -0.23
VRTN-201ENST00000256362 GPATCH11Q8N954 259 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 PHACTR2O75167 634 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 LRRN4CLQ8ND94 238 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 DBNDD2Q9BQY9 259 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 TBX22Q9Y458 520 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 CTIFO43310 598 aaKnown RBP13.59□□□□□ -0.23
VRTN-201ENST00000256362 SFPQP23246 707 aaKnown RBP eCLIP13.59□□□□□ -0.23
VRTN-201ENST00000256362 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 LINS1Q8NG48 757 aa13.59□□□□□ -0.23
VRTN-201ENST00000256362 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
VRTN-201ENST00000256362 IBSPP21815 317 aaPredicted RBP13.58□□□□□ -0.24
VRTN-201ENST00000256362 GPS2Q13227 327 aa13.58□□□□□ -0.24
VRTN-201ENST00000256362 LRRC8AQ8IWT6 810 aa13.58□□□□□ -0.24
VRTN-201ENST00000256362 CCAR1Q8IX12 1150 aaKnown RBP13.58□□□□□ -0.24
VRTN-201ENST00000256362 PDCP20941 246 aa13.58□□□□□ -0.24
VRTN-201ENST00000256362 LMOD1P29536 600 aaPredicted RBP13.58□□□□□ -0.24
VRTN-201ENST00000256362 APOBRQ0VD83 1088 aa13.58□□□□□ -0.24
VRTN-201ENST00000256362 OTUD7BQ6GQQ9 843 aa13.58□□□□□ -0.24
VRTN-201ENST00000256362 DBNLQ9UJU6 430 aaKnown RBP13.58□□□□□ -0.24
VRTN-201ENST00000256362 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
VRTN-201ENST00000256362 PIK3C2AO00443 1686 aa13.58□□□□□ -0.24
VRTN-201ENST00000256362 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
VRTN-201ENST00000256362 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.24
VRTN-201ENST00000256362 GCP02774 474 aa13.57□□□□□ -0.24
VRTN-201ENST00000256362 MCM6Q14566 821 aa13.57□□□□□ -0.24
VRTN-201ENST00000256362 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
VRTN-201ENST00000256362 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
VRTN-201ENST00000256362 DDX19AQ9NUU7 478 aaKnown RBP13.57□□□□□ -0.24
VRTN-201ENST00000256362 DIP2AQ14689 1571 aa13.57□□□□□ -0.24
VRTN-201ENST00000256362 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
VRTN-201ENST00000256362 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
VRTN-201ENST00000256362 ERO1AQ96HE7 468 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms