RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 SASS6Q6UVJ0 657 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 ARHGEF10LQ9HCE6 1279 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 PRM3Q9NNZ6 103 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 EYA2O00167 538 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 SSRP1Q08945 709 aaKnown RBP10.77□□□□□ -0.69
PDE6A-201ENST00000255266 PABPC4Q13310 644 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDE6A-201ENST00000255266 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 CHMP5Q9NZZ3 219 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 ERVV-1B6SEH8 477 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 MAGEC2Q9UBF1 373 aaPredicted RBP10.77□□□□□ -0.69
PDE6A-201ENST00000255266 DACH1Q9UI36 760 aa10.77□□□□□ -0.69
PDE6A-201ENST00000255266 HCLS1P14317 486 aaPredicted RBP10.76□□□□□ -0.69
PDE6A-201ENST00000255266 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
PDE6A-201ENST00000255266 WWC3Q9ULE0 1092 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 VAMP4O75379 141 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 NPR1P16066 1061 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 RPS8P62241 208 aaKnown RBP10.76□□□□□ -0.69
PDE6A-201ENST00000255266 GCKRQ14397 625 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 USP48Q86UV5 1035 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 ZNF408Q9H9D4 720 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
PDE6A-201ENST00000255266 USP31Q70CQ4 1352 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 RPS6KA4O75676 772 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 LPIN2Q92539 896 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 FAM89AQ96GI7 184 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 PIM2Q9P1W9 311 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 BIN2Q9UBW5 565 aaPredicted RBP10.76□□□□□ -0.69
PDE6A-201ENST00000255266 QRICH2Q9H0J4 1663 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 GRIN3BO60391 1043 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 KDM4AO75164 1064 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 BBOX1O75936 387 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 CALM1P0DP23 149 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 CALM2P0DP24 149 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 CALM3P0DP25 149 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 GOLGA8AA7E2F4 631 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 MATR3P43243 847 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDE6A-201ENST00000255266 SNRKQ9NRH2 765 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 SLC5A4Q9NY91 659 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 CSADQ9Y600 493 aa10.76□□□□□ -0.69
PDE6A-201ENST00000255266 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 CTSWP56202 376 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 RTL9Q8NET4 1388 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 LETM1O95202 739 aaPredicted RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 ATP2B1P20020 1258 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 SULF1Q8IWU6 871 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 ANKRD44Q8N8A2 993 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 PAG1Q9NWQ8 432 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 ATF5Q9Y2D1 282 aaPredicted RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 PCCAP05165 728 aaPredicted RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 CWF19L2Q2TBE0 894 aaKnown RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 CCDC184Q52MB2 194 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 TEX11Q8IYF3 940 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 KDRP35968 1356 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 SMARCA5O60264 1052 aaPredicted RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 SSFA2P28290 1259 aa10.75□□□□□ -0.69
PDE6A-201ENST00000255266 HSP90AA2PQ14568 343 aaPredicted RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 ZBTB38Q8NAP3 1195 aaPredicted RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 BICC1Q9H694 974 aaKnown RBP10.75□□□□□ -0.69
PDE6A-201ENST00000255266 RNF123Q5XPI4 1314 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.74□□□□□ -0.69
PDE6A-201ENST00000255266 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
PDE6A-201ENST00000255266 PER1O15534 1290 aaPredicted RBP10.74□□□□□ -0.69
PDE6A-201ENST00000255266 DESP17661 470 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 BRDTQ58F21 947 aaPredicted RBP10.74□□□□□ -0.69
PDE6A-201ENST00000255266 TMEM67Q5HYA8 995 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 CCDC39Q9UFE4 941 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 NEXMIFQ5QGS0 1516 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 CCDC148Q8NFR7 591 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 LEMD3Q9Y2U8 911 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
PDE6A-201ENST00000255266 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
PDE6A-201ENST00000255266 SLC9C2Q5TAH2 1124 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 CLEC4GQ6UXB4 293 aa10.74□□□□□ -0.69
PDE6A-201ENST00000255266 ODF2Q5BJF6 829 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 TTLL6Q8N841 843 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 MASTLQ96GX5 879 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 DDX49Q9Y6V7 483 aaKnown RBP10.73□□□□□ -0.69
PDE6A-201ENST00000255266 XDHP47989 1333 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 CCDC194A0A1B0GVG4 234 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 HMGN5P82970 282 aaKnown RBP10.73□□□□□ -0.69
PDE6A-201ENST00000255266 STK3Q13188 491 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 SYCP1Q15431 976 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 VTI1AQ96AJ9 217 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 SPATA31A1Q5TZJ5 1347 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 CT47A1Q5JQC4 288 aaPredicted RBP10.73□□□□□ -0.69
PDE6A-201ENST00000255266 PRPF40BQ6NWY9 871 aaKnown RBP10.73□□□□□ -0.69
PDE6A-201ENST00000255266 RICTORQ6R327 1708 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
PDE6A-201ENST00000255266 CASTP20810 708 aaKnown RBP10.73□□□□□ -0.69
PDE6A-201ENST00000255266 MCMDC2Q4G0Z9 681 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 HEG1Q9ULI3 1381 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 NLRP5P59047 1200 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 PNMA2Q9UL42 364 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 IVNS1ABPQ9Y6Y0 642 aa10.73□□□□□ -0.69
PDE6A-201ENST00000255266 TEKT1Q969V4 418 aa10.72□□□□□ -0.69
PDE6A-201ENST00000255266 MEIS3Q99687 375 aa10.72□□□□□ -0.69
PDE6A-201ENST00000255266 CFAP45Q9UL16 551 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms