RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 AACSQ86V21 672 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 BCL9O00512 1426 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 SYCE3A1L190 88 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 CDK5RAP2Q96SN8 1893 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 ATP5JP18859 108 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 KIAA2012Q0VF49 1180 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 IFNL2Q8IZJ0 200 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 BOLA2Q9H3K6 86 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 DDX49Q9Y6V7 483 aaKnown RBP11.01□□□□□ -0.65
RPA1-201ENST00000254719 GLRX3O76003 335 aaKnown RBP11□□□□□ -0.65
RPA1-201ENST00000254719 CDC37L1Q7L3B6 337 aa11□□□□□ -0.65
RPA1-201ENST00000254719 ISCA1Q9BUE6 129 aa11□□□□□ -0.65
RPA1-201ENST00000254719 TAF1LQ8IZX4 1826 aa11□□□□□ -0.65
RPA1-201ENST00000254719 CSB-PGBD3P0DP91 1061 aa11□□□□□ -0.65
RPA1-201ENST00000254719 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
RPA1-201ENST00000254719 WTIPA6NIX2 430 aaPredicted RBP11□□□□□ -0.65
RPA1-201ENST00000254719 CASTP20810 708 aaKnown RBP11□□□□□ -0.65
RPA1-201ENST00000254719 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
RPA1-201ENST00000254719 COL24A1Q17RW2 1714 aa11□□□□□ -0.65
RPA1-201ENST00000254719 EXOSC10Q01780 885 aaKnown RBP11□□□□□ -0.65
RPA1-201ENST00000254719 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
RPA1-201ENST00000254719 HLFQ16534 295 aa11□□□□□ -0.65
RPA1-201ENST00000254719 LRRFIP1Q32MZ4 808 aaKnown RBP11□□□□□ -0.65
RPA1-201ENST00000254719 HAUS7Q99871 368 aa11□□□□□ -0.65
RPA1-201ENST00000254719 SNRPA1P09661 255 aaKnown RBP10.99□□□□□ -0.65
RPA1-201ENST00000254719 ASAP1Q9ULH1 1129 aa10.99□□□□□ -0.65
RPA1-201ENST00000254719 RRP9O43818 475 aaKnown RBP10.99□□□□□ -0.65
RPA1-201ENST00000254719 SLC51AQ86UW1 340 aa10.99□□□□□ -0.65
RPA1-201ENST00000254719 PLBD2Q8NHP8 589 aa10.99□□□□□ -0.65
RPA1-201ENST00000254719 PIGBQ92521 554 aa10.99□□□□□ -0.65
RPA1-201ENST00000254719 EVI5LQ96CN4 794 aa10.99□□□□□ -0.65
RPA1-201ENST00000254719 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
RPA1-201ENST00000254719 NLRP2Q9NX02 1062 aa10.99□□□□□ -0.65
RPA1-201ENST00000254719 TIMM10P62072 90 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 TTC6Q86TZ1 520 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 PGBD1Q96JS3 809 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 HCLS1P14317 486 aaPredicted RBP10.98□□□□□ -0.65
RPA1-201ENST00000254719 PI16Q6UXB8 463 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 ATG3Q9NT62 314 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 CSF1RP07333 972 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 FDPSP14324 419 aaKnown RBP10.98□□□□□ -0.65
RPA1-201ENST00000254719 JAK2O60674 1132 aa10.98□□□□□ -0.65
RPA1-201ENST00000254719 ZSCAN22P10073 491 aaPredicted RBP10.98□□□□□ -0.65
RPA1-201ENST00000254719 COL1A1P02452 1464 aaPredicted RBP10.97□□□□□ -0.65
RPA1-201ENST00000254719 M0R2C6 588 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 ZKSCAN1P17029 563 aaPredicted RBP10.97□□□□□ -0.65
RPA1-201ENST00000254719 ADORA1P30542 326 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 SHISA4Q96DD7 197 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 DIAPH3Q9NSV4 1193 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 LIMCH1Q9UPQ0 1083 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 KIAA1551Q9HCM1 1747 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 DNM1Q05193 864 aaKnown RBP10.97□□□□□ -0.65
RPA1-201ENST00000254719 RBM43Q6ZSC3 357 aaKnown RBP10.97□□□□□ -0.65
RPA1-201ENST00000254719 ZNF646O15015 1829 aaPredicted RBP10.97□□□□□ -0.65
RPA1-201ENST00000254719 CENPFP49454 3210 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 F13A1P00488 732 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 CNTROBQ8N137 903 aa10.97□□□□□ -0.65
RPA1-201ENST00000254719 TNRC6CQ9HCJ0 1690 aaKnown RBP10.97□□□□□ -0.65
RPA1-201ENST00000254719 RPS6KB1P23443 525 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 RNF214Q8ND24 703 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.65
RPA1-201ENST00000254719 RFX7Q2KHR2 1363 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 SMIM22K7EJ46 135 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 GJB2P29033 226 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 RNF20Q5VTR2 975 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 LMBR1LQ6UX01 489 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 CCDC83Q8IWF9 413 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 FTOQ9C0B1 505 aaKnown RBP eCLIP10.96□□□□□ -0.65
RPA1-201ENST00000254719 KCNF1Q9H3M0 494 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 SLAIN2Q9P270 581 aa10.96□□□□□ -0.65
RPA1-201ENST00000254719 SCRN1Q12765 414 aa10.96□□□□□ -0.66
RPA1-201ENST00000254719 SMARCC2Q8TAQ2 1214 aa10.96□□□□□ -0.66
RPA1-201ENST00000254719 OSBP2Q969R2 916 aa10.96□□□□□ -0.66
RPA1-201ENST00000254719 CARD10Q9BWT7 1032 aa10.96□□□□□ -0.66
RPA1-201ENST00000254719 STX6O43752 255 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 SH3TC1Q8TE82 1336 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 BAZ2AQ9UIF9 1905 aaKnown RBP10.95□□□□□ -0.66
RPA1-201ENST00000254719 MYH13Q9UKX3 1938 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 LIG1P18858 919 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 ANTXR2P58335 489 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 PLCB2Q00722 1185 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 JAKMIP1Q96N16 626 aaKnown RBP10.95□□□□□ -0.66
RPA1-201ENST00000254719 MAST3O60307 1309 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
RPA1-201ENST00000254719 NASPP49321 788 aaPredicted RBP10.95□□□□□ -0.66
RPA1-201ENST00000254719 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 AMIGO3Q86WK7 504 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 CLASRPQ8N2M8 674 aaKnown RBP10.95□□□□□ -0.66
RPA1-201ENST00000254719 RIPOR2Q9Y4F9 1068 aa10.95□□□□□ -0.66
RPA1-201ENST00000254719 ATRNO75882 1429 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 A0A087WZG4 1122 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 ERVV-2B6SEH9 535 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 MBD3O95983 291 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 EVCP57679 992 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 FMNL2Q96PY5 1086 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 BRCA2P51587 3418 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 UBE2Q2LH0YL09 131 aa10.94□□□□□ -0.66
RPA1-201ENST00000254719 HIP1O00291 1037 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms