RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 GGA1Q9UJY5 639 aa22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 ZNRF3Q9ULT6 936 aa22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 GJA3Q9Y6H8 435 aa22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 DUOX1Q9NRD9 1551 aa22.64■■□□□ 1.22
SNRPA1-201ENST00000254193 WTIPA6NIX2 430 aaPredicted RBP22.64■■□□□ 1.21
SNRPA1-201ENST00000254193 MPHOSPH8Q99549 860 aa22.64■■□□□ 1.21
SNRPA1-201ENST00000254193 XDHP47989 1333 aa22.63■■□□□ 1.21
SNRPA1-201ENST00000254193 GPC2Q8N158 579 aa22.63■■□□□ 1.21
SNRPA1-201ENST00000254193 L3MBTL3Q96JM7 780 aaPredicted RBP22.63■■□□□ 1.21
SNRPA1-201ENST00000254193 EYA3Q99504 573 aa22.63■■□□□ 1.21
SNRPA1-201ENST00000254193 BICC1Q9H694 974 aaKnown RBP22.63■■□□□ 1.21
SNRPA1-201ENST00000254193 IPO8O15397 1037 aaKnown RBP22.62■■□□□ 1.21
SNRPA1-201ENST00000254193 CXCL9Q07325 125 aa22.62■■□□□ 1.21
SNRPA1-201ENST00000254193 DOK7Q18PE1 504 aa22.62■■□□□ 1.21
SNRPA1-201ENST00000254193 CCDC57Q2TAC2 916 aa22.62■■□□□ 1.21
SNRPA1-201ENST00000254193 ZNF594Q96JF6 807 aaPredicted RBP22.62■■□□□ 1.21
SNRPA1-201ENST00000254193 TNNQ9UQP3 1299 aa22.62■■□□□ 1.21
SNRPA1-201ENST00000254193 CCDC88AQ3V6T2 1871 aa22.62■■□□□ 1.21
SNRPA1-201ENST00000254193 LRRC37AA6NMS7 1700 aa22.61■■□□□ 1.21
SNRPA1-201ENST00000254193 YDJCA8MPS7 323 aa22.61■■□□□ 1.21
SNRPA1-201ENST00000254193 TRIM27P14373 513 aa22.61■■□□□ 1.21
SNRPA1-201ENST00000254193 ATP2B4P23634 1241 aa22.61■■□□□ 1.21
SNRPA1-201ENST00000254193 ANKRD44Q8N8A2 993 aa22.61■■□□□ 1.21
SNRPA1-201ENST00000254193 ZC3H12CQ9C0D7 883 aaKnown RBP22.61■■□□□ 1.21
SNRPA1-201ENST00000254193 DBNDD1Q9H9R9 158 aa22.61■■□□□ 1.21
SNRPA1-201ENST00000254193 RAD17O75943 681 aa22.6■■□□□ 1.21
SNRPA1-201ENST00000254193 ATF7IPQ6VMQ6 1270 aa22.6■■□□□ 1.21
SNRPA1-201ENST00000254193 RBM46Q8TBY0 533 aaKnown RBP22.6■■□□□ 1.21
SNRPA1-201ENST00000254193 IQCA1LA6NCM1 817 aa22.59■■□□□ 1.21
SNRPA1-201ENST00000254193 RABL6Q3YEC7 729 aaPredicted RBP22.59■■□□□ 1.21
SNRPA1-201ENST00000254193 TAF7LQ5H9L4 462 aa22.59■■□□□ 1.21
SNRPA1-201ENST00000254193 DICER1Q9UPY3 1922 aaKnown RBP22.59■■□□□ 1.21
SNRPA1-201ENST00000254193 CHRNDQ07001 517 aa22.58■■□□□ 1.21
SNRPA1-201ENST00000254193 INTS3Q68E01 1043 aaKnown RBP22.58■■□□□ 1.21
SNRPA1-201ENST00000254193 CIAPIN1Q6FI81 312 aa22.58■■□□□ 1.21
SNRPA1-201ENST00000254193 CLUAP1Q96AJ1 413 aa22.58■■□□□ 1.21
SNRPA1-201ENST00000254193 ANKRD2Q9GZV1 360 aa22.58■■□□□ 1.21
SNRPA1-201ENST00000254193 TAF1DQ9H5J8 278 aaPredicted RBP22.58■■□□□ 1.21
SNRPA1-201ENST00000254193 HACL1Q9UJ83 578 aa22.58■■□□□ 1.21
SNRPA1-201ENST00000254193 ECE2O60344 883 aa22.57■■□□□ 1.2
SNRPA1-201ENST00000254193 UBTFL1P0CB47 393 aaPredicted RBP22.57■■□□□ 1.2
SNRPA1-201ENST00000254193 LDHAL6AQ6ZMR3 332 aa22.57■■□□□ 1.2
SNRPA1-201ENST00000254193 HELBQ8NG08 1087 aaPredicted RBP22.57■■□□□ 1.2
SNRPA1-201ENST00000254193 KCNQ5Q9NR82 932 aa22.57■■□□□ 1.2
SNRPA1-201ENST00000254193 G3V3G9 751 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 POTEIP0CG38 1075 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 POTEJP0CG39 1038 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 DCAF8Q5TAQ9 597 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 ZKSCAN2Q63HK3 967 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 MEIS3Q99687 375 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 LEMD3Q9Y2U8 911 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 WDR90Q96KV7 1748 aa22.56■■□□□ 1.2
SNRPA1-201ENST00000254193 TAF5LO75529 589 aa22.55■■□□□ 1.2
SNRPA1-201ENST00000254193 EPHX2P34913 555 aa22.55■■□□□ 1.2
SNRPA1-201ENST00000254193 SCNN1DP51172 638 aa22.55■■□□□ 1.2
SNRPA1-201ENST00000254193 TNIP1Q15025 636 aa22.55■■□□□ 1.2
SNRPA1-201ENST00000254193 PUS3Q9BZE2 481 aaKnown RBP22.55■■□□□ 1.2
SNRPA1-201ENST00000254193 CNNM1Q9NRU3 951 aa22.55■■□□□ 1.2
SNRPA1-201ENST00000254193 ZNF804BA4D1E1 1349 aa22.55■■□□□ 1.2
SNRPA1-201ENST00000254193 SNAP23O00161 211 aa22.54■■□□□ 1.2
SNRPA1-201ENST00000254193 EPS15P42566 896 aa22.54■■□□□ 1.2
SNRPA1-201ENST00000254193 GMPSP49915 693 aaPredicted RBP22.54■■□□□ 1.2
SNRPA1-201ENST00000254193 SMC1BQ8NDV3 1235 aa22.54■■□□□ 1.2
SNRPA1-201ENST00000254193 LTBP1Q14766 1721 aa22.54■■□□□ 1.2
SNRPA1-201ENST00000254193 PSMD14O00487 310 aa22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 PLIN1O60240 522 aa22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 KLRK1P26718 216 aa22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 LMOD1P29536 600 aaPredicted RBP22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 KCNJ4P48050 445 aa22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 FSTL1Q12841 308 aa22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 EAPPQ56P03 285 aaPredicted RBP22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 TXNRD3Q86VQ6 643 aa22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 LRRFIP2Q9Y608 721 aaKnown RBP22.53■■□□□ 1.2
SNRPA1-201ENST00000254193 KLHDC4Q8TBB5 520 aa22.52■■□□□ 1.2
SNRPA1-201ENST00000254193 MED23Q9ULK4 1368 aa22.51■■□□□ 1.19
SNRPA1-201ENST00000254193 TMEM57Q8N5G2 664 aa22.51■■□□□ 1.19
SNRPA1-201ENST00000254193 GPRC5DQ9NZD1 345 aa22.51■■□□□ 1.19
SNRPA1-201ENST00000254193 ZBTB12Q9Y330 459 aaPredicted RBP22.51■■□□□ 1.19
SNRPA1-201ENST00000254193 MYH3P11055 1940 aa22.51■■□□□ 1.19
SNRPA1-201ENST00000254193 HSPA6P17066 643 aa22.5■■□□□ 1.19
SNRPA1-201ENST00000254193 RIPOR2Q9Y4F9 1068 aa22.5■■□□□ 1.19
SNRPA1-201ENST00000254193 GNAI3P08754 354 aa22.49■■□□□ 1.19
SNRPA1-201ENST00000254193 LRRC24Q50LG9 513 aa22.49■■□□□ 1.19
SNRPA1-201ENST00000254193 CHADLQ6NUI6 762 aa22.49■■□□□ 1.19
SNRPA1-201ENST00000254193 PNMA8AQ86V59 439 aaPredicted RBP22.49■■□□□ 1.19
SNRPA1-201ENST00000254193 LDHDQ86WU2 507 aa22.49■■□□□ 1.19
SNRPA1-201ENST00000254193 HDAC5Q9UQL6 1122 aa22.49■■□□□ 1.19
SNRPA1-201ENST00000254193 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
SNRPA1-201ENST00000254193 RFX5P48382 616 aaPredicted RBP22.48■■□□□ 1.19
SNRPA1-201ENST00000254193 PODNQ7Z5L7 613 aa22.48■■□□□ 1.19
SNRPA1-201ENST00000254193 FTSJ3Q8IY81 847 aaKnown RBP22.48■■□□□ 1.19
SNRPA1-201ENST00000254193 CLEC11AQ9Y240 323 aa22.48■■□□□ 1.19
SNRPA1-201ENST00000254193 VIL1P09327 827 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-201ENST00000254193 RLBP1P12271 317 aa22.47■■□□□ 1.19
SNRPA1-201ENST00000254193 DZIP1LQ8IYY4 767 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-201ENST00000254193 COA1Q9GZY4 146 aa22.47■■□□□ 1.19
SNRPA1-201ENST00000254193 CNOT7Q9UIV1 285 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-201ENST00000254193 MICALL2Q8IY33 904 aa22.46■■□□□ 1.19
SNRPA1-201ENST00000254193 RCAN3Q9UKA8 241 aa22.46■■□□□ 1.19
SNRPA1-201ENST00000254193 IRS2Q9Y4H2 1338 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms