RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 MYL6BP14649 208 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 FBLN1P23142 703 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 PLVAPQ9BX97 442 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 ITSN2Q9NZM3 1697 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 TRIM21P19474 475 aaKnown RBP14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 AOPEPQ8N6M6 819 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 CCDC110Q8TBZ0 833 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 SELENOSQ9BQE4 189 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 MYO1BO43795 1136 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 ZNF518AQ6AHZ1 1483 aa14.99□□□□□ -0.01
PCDHGA3-201ENST00000253812 C8orf34Q49A92 452 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 BCL2L12Q9HB09 334 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 NKTRP30414 1462 aaKnown RBP14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 BTBD11A6QL63 1104 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 ELF2Q15723 593 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 IQCGQ9H095 443 aaKnown RBP14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 RASAL2Q9UJF2 1139 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 CNPY2Q9Y2B0 182 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 GNAT3A8MTJ3 354 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 FERP16591 822 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 ALDH3A1P30838 453 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 ALDH1L2Q3SY69 923 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 WWC2Q6AWC2 1192 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 VCX3BQ9H321 246 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 GOLGA6CA6NDK9 693 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 GOLGA6DP0CG33 693 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 KIF5AQ12840 1032 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 GOLGA6AQ9NYA3 693 aa14.98□□□□□ -0.01
PCDHGA3-201ENST00000253812 TNRQ92752 1358 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 CEP120Q8N960 986 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 FAM114A2Q9NRY5 505 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 GBP1P32455 592 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 SSH1Q8WYL5 1049 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 CABS1Q96KC9 395 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 DDX23Q9BUQ8 820 aaKnown RBP14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 EFCC1Q9HA90 598 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 OAS2P29728 719 aaKnown RBP14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 INTS8Q75QN2 995 aaKnown RBP14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 RBSNQ9H1K0 784 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 NPHP3Q7Z494 1330 aa14.97□□□□□ -0.01
PCDHGA3-201ENST00000253812 CTNNA2P26232 953 aa14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 SYKP43405 635 aa14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 PNMA8AQ86V59 439 aaPredicted RBP14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 RLBP1P12271 317 aa14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 ZNF569Q5MCW4 686 aa14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 CWC25Q9NXE8 425 aaPredicted RBP14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 ISM2Q6H9L7 571 aa14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 MRPS27Q92552 414 aaKnown RBP14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 ANAPC4Q9UJX5 808 aa14.96□□□□□ -0.01
PCDHGA3-201ENST00000253812 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.02
PCDHGA3-201ENST00000253812 ZNF500O60304 480 aaPredicted RBP14.96□□□□□ -0.02
PCDHGA3-201ENST00000253812 CEP85LQ5SZL2 805 aa14.96□□□□□ -0.02
PCDHGA3-201ENST00000253812 DUSP27Q5VZP5 1158 aa14.96□□□□□ -0.02
PCDHGA3-201ENST00000253812 ZNF365Q70YC5 407 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 KCNG4Q8TDN1 519 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 SMARCA5O60264 1052 aaPredicted RBP14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 NEDD9Q14511 834 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 KIF6Q6ZMV9 814 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 RAB3IL1Q8TBN0 382 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 RAB34Q9BZG1 259 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 VEZTQ9HBM0 779 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 IGHDP01880 384 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 ZNF445P59923 1031 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 FKBP4Q02790 459 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 ACEP12821 1306 aa14.95□□□□□ -0.02
PCDHGA3-201ENST00000253812 GNL3LQ9NVN8 582 aaKnown RBP14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 WDHD1O75717 1129 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 LMOD1P29536 600 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 CCDC174Q6PII3 467 aa14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 SREK1Q8WXA9 508 aaKnown RBP14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 LZTFL1Q9NQ48 299 aa14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 RALGAPBQ86X10 1494 aa14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 KARSQ15046 597 aaKnown RBP14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 F13A1P00488 732 aa14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 MAP7Q14244 749 aa14.94□□□□□ -0.02
PCDHGA3-201ENST00000253812 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 TLDC2A0PJX2 215 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 PRPHP41219 470 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 CHMP4BP1P59074 171 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 CETN1Q12798 172 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 CCDC40Q4G0X9 1142 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 GBP7Q8N8V2 638 aaPredicted RBP14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 BAIAP2L1Q9UHR4 511 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 SLC8A1P32418 973 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 PPFIA1Q13136 1202 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 RPUSD2Q8IZ73 545 aaKnown RBP14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 CEP126Q9P2H0 1117 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 AMPD3Q01432 767 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 GOLGA5Q8TBA6 731 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 CARD6Q9BX69 1037 aa14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 CASQ2O14958 399 aaPredicted RBP14.93□□□□□ -0.02
PCDHGA3-201ENST00000253812 VIMP08670 466 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms