RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 FNBP4Q8N3X1 1017 aaPredicted RBP11.31□□□□□ -0.6
DHX40-201ENST00000251241 CCDC112Q8NEF3 446 aa11.31□□□□□ -0.6
DHX40-201ENST00000251241 CPSF2Q9P2I0 782 aaKnown RBP11.31□□□□□ -0.6
DHX40-201ENST00000251241 MAP3K2Q9Y2U5 619 aa11.31□□□□□ -0.6
DHX40-201ENST00000251241 CYP27B1O15528 508 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 RABEP1Q15276 862 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 DDB1Q16531 1140 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
DHX40-201ENST00000251241 RGPD1P0DJD0 1748 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 A0A1B0GUL7 405 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 CAPN15O75808 1086 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 NEK4P51957 841 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 KIF18AQ8NI77 898 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 DBF4Q9UBU7 674 aaPredicted RBP11.3□□□□□ -0.6
DHX40-201ENST00000251241 LMO7Q8WWI1 1683 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 SPATA31A5Q5VU36 1347 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 SPATA31A7Q8IWB4 1347 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 CWF19L2Q2TBE0 894 aaKnown RBP11.3□□□□□ -0.6
DHX40-201ENST00000251241 NBPF20Q3BBV1 942 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
DHX40-201ENST00000251241 RGS12O14924 1447 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 PHKG2P15735 406 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 ST5P78524 1137 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 NOM1Q5C9Z4 860 aaKnown RBP11.29□□□□□ -0.6
DHX40-201ENST00000251241 KIRREL3Q8IZU9 778 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 SIL1Q9H173 461 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 ECEL1O95672 775 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 VPS72Q15906 364 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
DHX40-201ENST00000251241 RRP15Q9Y3B9 282 aaKnown RBP11.29□□□□□ -0.6
DHX40-201ENST00000251241 DDX58O95786 925 aaKnown RBP11.29□□□□□ -0.6
DHX40-201ENST00000251241 MICALL1Q8N3F8 863 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 THOC1Q96FV9 657 aaKnown RBP11.29□□□□□ -0.6
DHX40-201ENST00000251241 CCDC34Q96HJ3 373 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 GDPD2Q9HCC8 539 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 PYCARDQ9ULZ3 195 aa11.29□□□□□ -0.6
DHX40-201ENST00000251241 TPD52L2O43399 206 aaKnown RBP11.28□□□□□ -0.6
DHX40-201ENST00000251241 BMS1Q14692 1282 aaKnown RBP11.28□□□□□ -0.6
DHX40-201ENST00000251241 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
DHX40-201ENST00000251241 ELF2Q15723 593 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 USP26Q9BXU7 913 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 CHMP3Q9Y3E7 222 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 PCDH11XQ9BZA7 1347 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 PCDH11YQ9BZA8 1340 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 SLIT2O94813 1529 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 BAG4O95429 457 aaKnown RBP11.28□□□□□ -0.6
DHX40-201ENST00000251241 CALRP27797 417 aaKnown RBP11.28□□□□□ -0.6
DHX40-201ENST00000251241 NAP1L1P55209 391 aaKnown RBP11.28□□□□□ -0.6
DHX40-201ENST00000251241 SNX21Q969T3 373 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 BCL9LQ86UU0 1499 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 ADCY5O95622 1261 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 CABP4P57796 275 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 NEXNQ0ZGT2 675 aa11.28□□□□□ -0.6
DHX40-201ENST00000251241 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
DHX40-201ENST00000251241 ABCC6O95255 1503 aa11.27□□□□□ -0.6
DHX40-201ENST00000251241 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.6
DHX40-201ENST00000251241 TPD52L1Q16890 204 aaPredicted RBP11.27□□□□□ -0.6
DHX40-201ENST00000251241 RABEP2Q9H5N1 569 aa11.27□□□□□ -0.6
DHX40-201ENST00000251241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.69e-7■■□□□ 14.5
DHX40-201ENST00000251241 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.6
DHX40-201ENST00000251241 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 CTR9Q6PD62 1173 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 CLASRPQ8N2M8 674 aaKnown RBP11.27□□□□□ -0.61
DHX40-201ENST00000251241 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 ACSBG1Q96GR2 724 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 UPF3BQ9BZI7 483 aaKnown RBP11.27□□□□□ -0.61
DHX40-201ENST00000251241 ZNF446Q9NWS9 450 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 SKAP2O75563 359 aaPredicted RBP11.27□□□□□ -0.61
DHX40-201ENST00000251241 PDRG1Q9NUG6 133 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 BABAM1Q9NWV8 329 aa11.27□□□□□ -0.61
DHX40-201ENST00000251241 TPM3P06753 285 aa11.26□□□□□ -0.61
DHX40-201ENST00000251241 ISM2Q6H9L7 571 aa11.26□□□□□ -0.61
DHX40-201ENST00000251241 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
DHX40-201ENST00000251241 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
DHX40-201ENST00000251241 DCAF5Q96JK2 942 aa11.26□□□□□ -0.61
DHX40-201ENST00000251241 KIF2CQ99661 725 aa11.26□□□□□ -0.61
DHX40-201ENST00000251241 CWC15Q9P013 229 aaKnown RBP11.26□□□□□ -0.61
DHX40-201ENST00000251241 MRFAP1Q9Y605 127 aa11.26□□□□□ -0.61
DHX40-201ENST00000251241 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
DHX40-201ENST00000251241 MCM5P33992 734 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
DHX40-201ENST00000251241 HS1BP3Q53T59 392 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 CDCA7Q9BWT1 371 aaPredicted RBP11.25□□□□□ -0.61
DHX40-201ENST00000251241 TMEM165Q9HC07 324 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 TRMT1Q9NXH9 659 aaKnown RBP11.25□□□□□ -0.61
DHX40-201ENST00000251241 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
DHX40-201ENST00000251241 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 KMT5BQ4FZB7 885 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 FAM184AQ8NB25 1140 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
DHX40-201ENST00000251241 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms